; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0018663 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018663
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr05:16623619..16625902
RNA-Seq ExpressionPI0018663
SyntenyPI0018663
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061331.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.8e-7950.27Show/hide
Query:  MESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATL
        MESPK  I+++EN L+DNS   S+  +KE+  +V+  MMA++TAEA MAEMERK+NFLMKVVEERDHEI +L++ ++ RETA SSQT VVKA DKGK  +
Subjt:  MESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATL

Query:  QENQ-TQQSIFIVTIDSQNKDEPVE-------------------------DDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKGRKKTWKPKR
        Q+NQ  QQS+ + ++  Q   + +                          D+ +  + +  R   +   +  + +  + Y G +K    +GR      K 
Subjt:  QENQ-TQQSIFIVTIDSQNKDEPVE-------------------------DDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKGRKKTWKPKR

Query:  MQEEDDDFHR-PQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPR
        M+       R   R V   +   R+F + HPEE+L+V A H  SIVEVDNN+ S+E+VDNS EI QKTSV DRIKP TTRS +FQRLS+ATK+EENQCP 
Subjt:  MQEEDDDFHR-PQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPR

Query:  STSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI
         T TRT AFKRLSIS SKKDRP+T  F RLK+T+ Q +REMK+LK KPFHEEN+DDKIHS V SRMKRKLS+
Subjt:  STSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI

KAA0062063.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.8e-7336.87Show/hide
Query:  EKQEQGSVLTKKSWEQLMESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAG
        ++Q QG  + +   +QL+ESPK   +I+EN L+++   +S   +KE+   V+S++MAD+T EA  AEMERKIN L+KVVEERDH+I + +D +   E+  
Subjt:  EKQEQGSVLTKKSWEQLMESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAG

Query:  SSQTLVVKAYDKGKATLQENQTQQSIFIVTI---------------------------------------------------------------------
        SS+T +VKA DKGKA LQENQ Q SI I ++                                                                     
Subjt:  SSQTLVVKAYDKGKATLQENQTQQSIFIVTI---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------DSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVT
                              +SQ K+EP++DD K WI V R+K+ + + +  +   HQ +  GS +HKNKG+  KK  K K ++ +DDDF +P+R +T
Subjt:  ----------------------DSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVT

Query:  LAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTS
        L EF PR+F   +P+E+L++ A H +S+VEVDNN+ S E+VDNS EI Q+T V DRIKPSTTRS VFQRLS+  KEEENQCP STST+T  FKRLSISTS
Subjt:  LAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTS

Query:  KKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDD-KIHSRVLSRMKRKLSI
        KKDRPST  F RLK  +DQ +REMKTLK K F EE NDD KIH+RV SRMKRKLSI
Subjt:  KKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDD-KIHSRVLSRMKRKLSI

TYK08171.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]9.0e-7335.27Show/hide
Query:  MESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATL
        M+SPK  I+++EN L+DNS   S+  +KE+  +V+S+MMAD+T EAA+AEMERK+NFLMKVVEERDHEI +L++ ++  ET  SSQT VVKA DKGK  +
Subjt:  MESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATL

Query:  QENQTQQ---------------------------------------------------------------------------------------------
        QEN+ QQ                                                                                             
Subjt:  QENQTQQ---------------------------------------------------------------------------------------------

Query:  ----SIF---------------------------------------------------------------------------------------------
            S F                                                                                             
Subjt:  ----SIF---------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------IVTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHER
                                                                       I+T +SQNK+EP+ED+ + WI + R+K  + + +  +
Subjt:  ---------------------------------------------------------------IVTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHER

Query:  VRSHQNYRGGSKTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLD
        +  HQ +  GS +HKNKG+  KK  KPK ++ +D+DF RP+R +TL EF PR+F +GH +E+L+V A +  SI+EVDNN+ S ++++NS EI Q+  V +
Subjt:  VRSHQNYRGGSKTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLD

Query:  RIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDD-KIHSRVLSRMKRKLS
        RIKPSTTRS VFQRLSLA KEEENQCP ST TRT AFKRL+ISTSKKDRPST VFYRLKMT+DQ +REMK LK K FHEENNDD KIHSRV SRMKRKLS
Subjt:  RIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDD-KIHSRVLSRMKRKLS

Query:  I
        +
Subjt:  I

TYK09793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.1e-7437.96Show/hide
Query:  LTKKSWEQLMESPKGRIIIRENLLFD----NSTPTSNLLEKESQLEVVSIMMADV-TAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQ
        + K  WEQ+ + PKG I+I+EN   D    +S P+S   E+     ++S+M+ +V T+E  M E+E+K+N LMKVVEERD+EIA LK+HI++ + A SS 
Subjt:  LTKKSWEQLMESPKGRIIIRENLLFD----NSTPTSNLLEKESQLEVVSIMMADV-TAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQ

Query:  TLVVKAYDKGKATLQENQTQQSIFI---------------------------------------------------------------------------
           VK  DKGKA +QE+Q+Q S  I                                                                           
Subjt:  TLVVKAYDKGKATLQENQTQQSIFI---------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------VTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKG--RKKTWKPKRMQEEDDDFHRPQRPVTLAEFLPR
                    VTI+SQNK+   +DD +GWI VTR+K  + + + +  R HQ Y  GS ++K KG   KK W PK ++ +D+DF + +R +TLAEFLPR
Subjt:  ------------VTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKG--RKKTWKPKRMQEEDDDFHRPQRPVTLAEFLPR

Query:  NFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPST
        +F +GHPEE+L+V A HA SIVEVDNN+ S ++V+NS EI Q+TSV DRIKPSTTRS VFQRLS+ATKEEENQCP    TRT  FKRLSISTSKKDRPST
Subjt:  NFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPST

Query:  LVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI
          F RLKMT+DQ +REMK+ K KPF EEN+DDKIHS V SRMKRKLS+
Subjt:  LVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI

TYK20938.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.9e-7354.33Show/hide
Query:  ERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATLQENQTQQSIF-----IVTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGS
        E D +  +  +H+    T+  S ++++  YD+ K+ +Q    +  +      I+T +SQNK+EP+ED+ + WI V  +K+ + S +  +   HQ Y  G+
Subjt:  ERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATLQENQTQQSIF-----IVTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGS

Query:  KTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPV
         +H  KGR  KK WKPK M+ +D+DF +P+R +TLA+FLPRNF + HPEE+L+V A H  SIVEVDNN+ S+E+VDNS EI Q+TSV +RIKP TTRS V
Subjt:  KTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPV

Query:  FQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI
        FQRLS+ATKEEENQCP ST  RT A KRLSISTSKK RPST  F RLKMT+DQ +REMK+LK KPFHEEN+DDKIH R+ SR+KRK S+
Subjt:  FQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI

TrEMBL top hitse value%identityAlignment
A0A5A7UWX8 Ty3-gypsy retrotransposon protein4.4e-7335.27Show/hide
Query:  MESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATL
        M+SPK  I+++EN L+DNS   S+  +KE+  +V+S+MMAD+T EAA+AEMERK+NFLMKVVEERDHEI +L++ ++  ET  SSQT VVKA DKGK  +
Subjt:  MESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATL

Query:  QENQTQQ---------------------------------------------------------------------------------------------
        QEN+ QQ                                                                                             
Subjt:  QENQTQQ---------------------------------------------------------------------------------------------

Query:  ----SIF---------------------------------------------------------------------------------------------
            S F                                                                                             
Subjt:  ----SIF---------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------IVTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHER
                                                                       I+T +SQNK+EP+ED+ + WI + R+K  + + +  +
Subjt:  ---------------------------------------------------------------IVTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHER

Query:  VRSHQNYRGGSKTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLD
        +  HQ +  GS +HKNKG+  KK  KPK ++ +D+DF RP+R +TL EF PR+F +GH +E+L+V A +  SI+EVDNN+ S ++++NS EI Q+  V +
Subjt:  VRSHQNYRGGSKTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLD

Query:  RIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDD-KIHSRVLSRMKRKLS
        RIKPSTTRS VFQRLSLA KEEENQCP ST TRT AFKRL+ISTSKKDRPST VFYRLKMT+DQ +REMK LK K FHEENNDD KIHSRV SRMKRKLS
Subjt:  RIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDD-KIHSRVLSRMKRKLS

Query:  I
        +
Subjt:  I

A0A5A7V1P3 Ty3-gypsy retrotransposon protein8.8e-7436.87Show/hide
Query:  EKQEQGSVLTKKSWEQLMESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAG
        ++Q QG  + +   +QL+ESPK   +I+EN L+++   +S   +KE+   V+S++MAD+T EA  AEMERKIN L+KVVEERDH+I + +D +   E+  
Subjt:  EKQEQGSVLTKKSWEQLMESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAG

Query:  SSQTLVVKAYDKGKATLQENQTQQSIFIVTI---------------------------------------------------------------------
        SS+T +VKA DKGKA LQENQ Q SI I ++                                                                     
Subjt:  SSQTLVVKAYDKGKATLQENQTQQSIFIVTI---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------DSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVT
                              +SQ K+EP++DD K WI V R+K+ + + +  +   HQ +  GS +HKNKG+  KK  K K ++ +DDDF +P+R +T
Subjt:  ----------------------DSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVT

Query:  LAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTS
        L EF PR+F   +P+E+L++ A H +S+VEVDNN+ S E+VDNS EI Q+T V DRIKPSTTRS VFQRLS+  KEEENQCP STST+T  FKRLSISTS
Subjt:  LAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTS

Query:  KKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDD-KIHSRVLSRMKRKLSI
        KKDRPST  F RLK  +DQ +REMKTLK K F EE NDD KIH+RV SRMKRKLSI
Subjt:  KKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDD-KIHSRVLSRMKRKLSI

A0A5A7V6H5 Ty3-gypsy retrotransposon protein1.8e-7950.27Show/hide
Query:  MESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATL
        MESPK  I+++EN L+DNS   S+  +KE+  +V+  MMA++TAEA MAEMERK+NFLMKVVEERDHEI +L++ ++ RETA SSQT VVKA DKGK  +
Subjt:  MESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATL

Query:  QENQ-TQQSIFIVTIDSQNKDEPVE-------------------------DDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKGRKKTWKPKR
        Q+NQ  QQS+ + ++  Q   + +                          D+ +  + +  R   +   +  + +  + Y G +K    +GR      K 
Subjt:  QENQ-TQQSIFIVTIDSQNKDEPVE-------------------------DDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKGRKKTWKPKR

Query:  MQEEDDDFHR-PQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPR
        M+       R   R V   +   R+F + HPEE+L+V A H  SIVEVDNN+ S+E+VDNS EI QKTSV DRIKP TTRS +FQRLS+ATK+EENQCP 
Subjt:  MQEEDDDFHR-PQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPR

Query:  STSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI
         T TRT AFKRLSIS SKKDRP+T  F RLK+T+ Q +REMK+LK KPFHEEN+DDKIHS V SRMKRKLS+
Subjt:  STSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI

A0A5D3CD55 Ty3-gypsy retrotransposon protein1.0e-7437.96Show/hide
Query:  LTKKSWEQLMESPKGRIIIRENLLFD----NSTPTSNLLEKESQLEVVSIMMADV-TAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQ
        + K  WEQ+ + PKG I+I+EN   D    +S P+S   E+     ++S+M+ +V T+E  M E+E+K+N LMKVVEERD+EIA LK+HI++ + A SS 
Subjt:  LTKKSWEQLMESPKGRIIIRENLLFD----NSTPTSNLLEKESQLEVVSIMMADV-TAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQ

Query:  TLVVKAYDKGKATLQENQTQQSIFI---------------------------------------------------------------------------
           VK  DKGKA +QE+Q+Q S  I                                                                           
Subjt:  TLVVKAYDKGKATLQENQTQQSIFI---------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------VTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKG--RKKTWKPKRMQEEDDDFHRPQRPVTLAEFLPR
                    VTI+SQNK+   +DD +GWI VTR+K  + + + +  R HQ Y  GS ++K KG   KK W PK ++ +D+DF + +R +TLAEFLPR
Subjt:  ------------VTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKG--RKKTWKPKRMQEEDDDFHRPQRPVTLAEFLPR

Query:  NFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPST
        +F +GHPEE+L+V A HA SIVEVDNN+ S ++V+NS EI Q+TSV DRIKPSTTRS VFQRLS+ATKEEENQCP    TRT  FKRLSISTSKKDRPST
Subjt:  NFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPST

Query:  LVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI
          F RLKMT+DQ +REMK+ K KPF EEN+DDKIHS V SRMKRKLS+
Subjt:  LVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI

A0A5D3DBR8 Retrotransposon gag protein3.3e-7354.33Show/hide
Query:  ERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATLQENQTQQSIF-----IVTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGS
        E D +  +  +H+    T+  S ++++  YD+ K+ +Q    +  +      I+T +SQNK+EP+ED+ + WI V  +K+ + S +  +   HQ Y  G+
Subjt:  ERDHEIASLKDHIKARETAGSSQTLVVKAYDKGKATLQENQTQQSIF-----IVTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGS

Query:  KTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPV
         +H  KGR  KK WKPK M+ +D+DF +P+R +TLA+FLPRNF + HPEE+L+V A H  SIVEVDNN+ S+E+VDNS EI Q+TSV +RIKP TTRS V
Subjt:  KTHKNKGR--KKTWKPKRMQEEDDDFHRPQRPVTLAEFLPRNFFDGHPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPV

Query:  FQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI
        FQRLS+ATKEEENQCP ST  RT A KRLSISTSKK RPST  F RLKMT+DQ +REMK+LK KPFHEEN+DDKIH R+ SR+KRK S+
Subjt:  FQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHEREMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAACAAGAACAAGGTTCCGTTCTCACAAAGAAAAGTTGGGAACAACTGATGGAATCTCCTAAAGGCAGAATCATCATCAGAGAGAATCTTTTGTTCGACAACTC
TACTCCTACTTCTAATCTATTAGAGAAAGAATCTCAACTTGAAGTAGTGTCTATCATGATGGCAGATGTAACAGCTGAGGCAGCCATGGCAGAGATGGAAAGGAAAATAA
ATTTCCTAATGAAGGTTGTCGAGGAGCGAGATCATGAAATCGCTTCCTTGAAAGATCATATAAAGGCTCGTGAAACTGCTGGGTCGAGCCAAACTCTTGTTGTTAAAGCT
TATGATAAAGGAAAAGCTACGTTGCAGGAAAACCAAACGCAACAGTCCATCTTCATCGTGACGATAGACTCCCAAAACAAAGACGAGCCTGTTGAAGATGATGACAAAGG
GTGGATCTTTGTGACTCGTCGAAAGAAAGGAAAGTTAAGTCTTGTCCATGAGAGGGTACGCTCCCACCAAAATTACAGAGGGGGAAGCAAAACTCACAAAAATAAAGGAA
GAAAGAAGACGTGGAAGCCTAAGCGCATGCAGGAAGAAGATGATGACTTCCACCGACCTCAACGACCGGTAACTTTGGCAGAATTCCTCCCAAGAAACTTCTTTGATGGT
CATCCAGAGGAAGTCTTGAAAGTCATTGCATATCATGCTATCAGCATAGTAGAAGTCGACAATAATCATGCATCTTTTGAAAAAGTCGACAATTCAAGGGAAATCATGCA
AAAGACTTCTGTCTTGGATCGTATTAAGCCTTCAACTACTCGATCTCCAGTCTTTCAAAGGTTGAGTTTGGCCACGAAAGAAGAAGAAAATCAATGTCCAAGGTCTACTT
CTACTCGAACTTTAGCTTTCAAAAGGCTAAGCATCTCCACCTCAAAGAAAGATCGACCTTCAACATTAGTTTTTTATCGTCTAAAGATGACAAGTGATCAACATGAAAGA
GAGATGAAAACTTTAAAGGTAAAACCATTTCATGAAGAAAACAATGATGATAAGATTCACAGTCGTGTCCTATCACGCATGAAGAGGAAGTTGTCTATTATACAGAAGAC
CCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAACAAGAACAAGGTTCCGTTCTCACAAAGAAAAGTTGGGAACAACTGATGGAATCTCCTAAAGGCAGAATCATCATCAGAGAGAATCTTTTGTTCGACAACTC
TACTCCTACTTCTAATCTATTAGAGAAAGAATCTCAACTTGAAGTAGTGTCTATCATGATGGCAGATGTAACAGCTGAGGCAGCCATGGCAGAGATGGAAAGGAAAATAA
ATTTCCTAATGAAGGTTGTCGAGGAGCGAGATCATGAAATCGCTTCCTTGAAAGATCATATAAAGGCTCGTGAAACTGCTGGGTCGAGCCAAACTCTTGTTGTTAAAGCT
TATGATAAAGGAAAAGCTACGTTGCAGGAAAACCAAACGCAACAGTCCATCTTCATCGTGACGATAGACTCCCAAAACAAAGACGAGCCTGTTGAAGATGATGACAAAGG
GTGGATCTTTGTGACTCGTCGAAAGAAAGGAAAGTTAAGTCTTGTCCATGAGAGGGTACGCTCCCACCAAAATTACAGAGGGGGAAGCAAAACTCACAAAAATAAAGGAA
GAAAGAAGACGTGGAAGCCTAAGCGCATGCAGGAAGAAGATGATGACTTCCACCGACCTCAACGACCGGTAACTTTGGCAGAATTCCTCCCAAGAAACTTCTTTGATGGT
CATCCAGAGGAAGTCTTGAAAGTCATTGCATATCATGCTATCAGCATAGTAGAAGTCGACAATAATCATGCATCTTTTGAAAAAGTCGACAATTCAAGGGAAATCATGCA
AAAGACTTCTGTCTTGGATCGTATTAAGCCTTCAACTACTCGATCTCCAGTCTTTCAAAGGTTGAGTTTGGCCACGAAAGAAGAAGAAAATCAATGTCCAAGGTCTACTT
CTACTCGAACTTTAGCTTTCAAAAGGCTAAGCATCTCCACCTCAAAGAAAGATCGACCTTCAACATTAGTTTTTTATCGTCTAAAGATGACAAGTGATCAACATGAAAGA
GAGATGAAAACTTTAAAGGTAAAACCATTTCATGAAGAAAACAATGATGATAAGATTCACAGTCGTGTCCTATCACGCATGAAGAGGAAGTTGTCTATTATACAGAAGAC
CCTCTGA
Protein sequenceShow/hide protein sequence
MEKQEQGSVLTKKSWEQLMESPKGRIIIRENLLFDNSTPTSNLLEKESQLEVVSIMMADVTAEAAMAEMERKINFLMKVVEERDHEIASLKDHIKARETAGSSQTLVVKA
YDKGKATLQENQTQQSIFIVTIDSQNKDEPVEDDDKGWIFVTRRKKGKLSLVHERVRSHQNYRGGSKTHKNKGRKKTWKPKRMQEEDDDFHRPQRPVTLAEFLPRNFFDG
HPEEVLKVIAYHAISIVEVDNNHASFEKVDNSREIMQKTSVLDRIKPSTTRSPVFQRLSLATKEEENQCPRSTSTRTLAFKRLSISTSKKDRPSTLVFYRLKMTSDQHER
EMKTLKVKPFHEENNDDKIHSRVLSRMKRKLSIIQKTL