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PI0018667 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018667
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:21463308..21463808
RNA-Seq ExpressionPI0018667
SyntenyPI0018667
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-6375.46Show/hide
Query:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM
        MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DLVCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV M
Subjt:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM

Query:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE
        FL+ILAHD+KNRVIQREF+RSGET+SRHFN+VLL V+RLHDELL KPQPV N CTD RWRWFE
Subjt:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE

KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-6374.85Show/hide
Query:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM
        MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DLVCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV M
Subjt:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM

Query:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE
        FL+ILAHD+KNRVIQREF+RSGET+SRHFN+VLL V+RLH+ELL KPQPV N CTD RWRWFE
Subjt:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-6375.46Show/hide
Query:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM
        MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DLVCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV M
Subjt:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM

Query:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE
        FL+ILAHD+KNRVIQREF+RSGET+SRHFN+VLL V+RLHDELL KPQPV N CTD RWRWFE
Subjt:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE

KAA0065736.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-6374.23Show/hide
Query:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM
        MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIHE+DLVCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV M
Subjt:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM

Query:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE
        FL+ILAHD+KNRVIQREF+RSGET+ RHFN++ L V+RLHDELL KPQPV N CTD RWRWFE
Subjt:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE

KAA0065893.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-6475.46Show/hide
Query:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM
        MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DLVCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV M
Subjt:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM

Query:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE
        FLYILAHD+KNRVIQREF+RSGET+SRHFN+VLL V+RLH+ELL KPQPV N CTD RWRWFE
Subjt:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein4.8e-6475.46Show/hide
Query:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM
        MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DLVCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV M
Subjt:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM

Query:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE
        FL+ILAHD+KNRVIQREF+RSGET+SRHFN+VLL V+RLHDELL KPQPV N CTD RWRWFE
Subjt:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE

A0A5A7TXW1 Retrotransposon protein4.8e-6475.46Show/hide
Query:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM
        MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DLVCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV M
Subjt:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM

Query:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE
        FL+ILAHD+KNRVIQREF+RSGET+SRHFN+VLL V+RLHDELL KPQPV N CTD RWRWFE
Subjt:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE

A0A5A7VCK9 Retrotransposon protein3.7e-6475.46Show/hide
Query:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM
        MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DLVCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV M
Subjt:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM

Query:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE
        FLYILAHD+KNRVIQREF+RSGET+SRHFN+VLL V+RLH+ELL KPQPV N CTD RWRWFE
Subjt:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE

A0A5A7VHB0 Retrotransposon protein1.4e-6374.23Show/hide
Query:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM
        MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIHE+DLVCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV M
Subjt:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM

Query:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE
        FL+ILAHD+KNRVIQREF+RSGET+ RHFN++ L V+RLHDELL KPQPV N CTD RWRWFE
Subjt:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE

A0A5D3BDX0 Retrotransposon protein1.4e-6374.85Show/hide
Query:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM
        MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DLVCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV M
Subjt:  MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTM

Query:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE
        FL+ILAHD+KNRVIQREF+RSGET+SRHFN+VLL V+RLH+ELL KPQPV N CTD RWRWFE
Subjt:  FLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein1.5e-0937.5Show/hide
Query:  FRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKP
        +R + ++   C Q +RM   CFT LC++L+T   LQ T  I +EE V MFL I  H+   R +   F R+ ETV R F  VL     L  + +  P
Subjt:  FRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKP

AT5G28730.1 unknown protein8.3e-0836.46Show/hide
Query:  IHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPV
        I+ N++ C+  +RM    FT LC +L    GLQS+  I ++E V +FL I A +   R I   F  + ET+ R F+ VL  + RL  E + +P+ V
Subjt:  IHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPV

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.1e-1239.36Show/hide
Query:  CRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACT
        C ++ RMD+  F  LC LL+T   L+ T  I +E  + +FL+I+ H+++ R +Q  F  SGET+SRHFN VL  V+ +  +     QP +N+ T
Subjt:  CRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACACACGACGACATTGCGTCCCTACATAACGTGTTCATAACATTCCAACGTCAGTTGCTATTGACGTTGAAATTGTTAATGAATGACAACAAGAGGATAGCGCA
AGTACCTTCCGACATGAGGTATAGGATTAGACAGTTGGCTTACTTTCGCATGATCCATGAAAATGACCTCGTGTGTCGTCAAAGTATGCGAATGGACAGACGATGCTTCA
CCATTTTATGTCATCTACTCCGAACTGTAGCTGGATTACAGTCCACTGAAATGATCGATGTCGAAGAAATGGTCACCATGTTCCTTTACATACTGGCGCACGACATGAAA
AATCGTGTCATTCAACGTGAGTTCGTGCGGTCCGGTGAGACTGTTTCACGTCATTTCAACCTTGTACTGCTGACTGTTTTACGCCTCCATGATGAGCTTTTGGCGAAACC
ACAACCGGTGACAAACGCTTGCACAGATGCACGGTGGAGGTGGTTCGAGGTACGGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACACACACGACGACATTGCGTCCCTACATAACGTGTTCATAACATTCCAACGTCAGTTGCTATTGACGTTGAAATTGTTAATGAATGACAACAAGAGGATAGCGCA
AGTACCTTCCGACATGAGGTATAGGATTAGACAGTTGGCTTACTTTCGCATGATCCATGAAAATGACCTCGTGTGTCGTCAAAGTATGCGAATGGACAGACGATGCTTCA
CCATTTTATGTCATCTACTCCGAACTGTAGCTGGATTACAGTCCACTGAAATGATCGATGTCGAAGAAATGGTCACCATGTTCCTTTACATACTGGCGCACGACATGAAA
AATCGTGTCATTCAACGTGAGTTCGTGCGGTCCGGTGAGACTGTTTCACGTCATTTCAACCTTGTACTGCTGACTGTTTTACGCCTCCATGATGAGCTTTTGGCGAAACC
ACAACCGGTGACAAACGCTTGCACAGATGCACGGTGGAGGTGGTTCGAGGTACGGTTGTAA
Protein sequenceShow/hide protein sequence
MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMK
NRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFEVRL