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PI0018674 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018674
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr04:26900629..26901591
RNA-Seq ExpressionPI0018674
SyntenyPI0018674
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-1838.01Show/hide
Query:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATH------------------------------------------------------------------
        +AP+L HAN+HLL GRA  SRW+DQFCVTR ATH                                                                  
Subjt:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATH------------------------------------------------------------------

Query:  ----------------------RSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV
                              RSNN RLR+V DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRV
Subjt:  ----------------------RSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV

KAA0064192.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.2e-1863.86Show/hide
Query:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV
        +AP+L HANDHLL GRA  S              RSNN RLR+V +DPQQVLDICNNNERYMEEIH MYD+PIVPP  +RG V
Subjt:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV

KAA0064245.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]3.9e-1666.67Show/hide
Query:  HDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV
        H  R   QF + ++   RSNN RLR+V DDPQQVLDICNNNERYMEEIH MYD+PIVP P++RGR+
Subjt:  HDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV

KAA0065673.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.3e-1676.79Show/hide
Query:  VTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV
        +TR    RSNN +LR+V DDPQQVLDICNNNERY+EEIH MYD+PIVPPPV+RGRV
Subjt:  VTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV

TYK02837.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.2e-1863.86Show/hide
Query:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV
        +AP+L HANDHLL GRA  S              RSNN RLR+V +DPQQVLDICNNNERYMEEIH MYD+PIVPP  +RG V
Subjt:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.9e-1938.01Show/hide
Query:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATH------------------------------------------------------------------
        +AP+L HAN+HLL GRA  SRW+DQFCVTR ATH                                                                  
Subjt:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATH------------------------------------------------------------------

Query:  ----------------------RSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV
                              RSNN RLR+V DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRV
Subjt:  ----------------------RSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV

A0A5A7V745 Serine/threonine-protein phosphatase 7 long form-like protein2.0e-1863.86Show/hide
Query:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV
        +AP+L HANDHLL GRA  S              RSNN RLR+V +DPQQVLDICNNNERYMEEIH MYD+PIVPP  +RG V
Subjt:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV

A0A5A7VBU8 GATA zinc finger domain-containing protein 10-like isoform X26.5e-1776.79Show/hide
Query:  VTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV
        +TR    RSNN +LR+V DDPQQVLDICNNNERY+EEIH MYD+PIVPPPV+RGRV
Subjt:  VTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV

A0A5A7VEC1 GATA zinc finger domain-containing protein 10-like isoform X21.9e-1666.67Show/hide
Query:  HDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV
        H  R   QF + ++   RSNN RLR+V DDPQQVLDICNNNERYMEEIH MYD+PIVP P++RGR+
Subjt:  HDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV

A0A5D3BTN9 Serine/threonine-protein phosphatase 7 long form-like protein2.0e-1863.86Show/hide
Query:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV
        +AP+L HANDHLL GRA  S              RSNN RLR+V +DPQQVLDICNNNERYMEEIH MYD+PIVPP  +RG V
Subjt:  MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCAAAACTAAGACATGCAAATGATCATCTACTACTTGGACGAGCACACGATTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATAGATCGAA
CAACAGAAGACTTCGTGAAGTTGTAGATGATCCACAACAAGTTCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTG
TACCTCCACCCGTTAACAGGGGACGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCAAAACTAAGACATGCAAATGATCATCTACTACTTGGACGAGCACACGATTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATAGATCGAA
CAACAGAAGACTTCGTGAAGTTGTAGATGATCCACAACAAGTTCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTG
TACCTCCACCCGTTAACAGGGGACGTGTTTGA
Protein sequenceShow/hide protein sequence
MAPKLRHANDHLLLGRAHDSRWRDQFCVTRSATHRSNNRRLREVVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRV