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PI0018681 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018681
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionArabinogalactan peptide 23
Genome locationchr04:10996114..10996803
RNA-Seq ExpressionPI0018681
SyntenyPI0018681
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048336.1 Arabinogalactan peptide 23 [Cucumis melo var. makuwa]6.7e-1893.33Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACA+LFAAATVSA VA+D+ALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
KAG7018086.1 hypothetical protein SDJN02_19952, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1591.38Show/hide
Query:  MKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MKKIACAVLFAAATVSAVVA DEALAPAPGPSSGAA GLPAIGS++GASLLS AAYYL
Subjt:  MKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
KGN58598.1 hypothetical protein Csa_001979 [Cucumis sativus]1.9e-1793.33Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACAVLFAAATV+AVVA DEALAPAPGPSSGA IG+PAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
XP_022983304.1 arabinogalactan peptide 23-like [Cucurbita maxima]1.3e-1691.67Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACAVLFAAATVSAVVA DEALAPAPGPSSGAA GLPAIGS +GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
XP_038905644.1 arabinogalactan protein 23-like [Benincasa hispida]5.7e-1791.67Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACAVLFAAATVSA VA DEALAPAPGPSSGAAIGLPAIGS++GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
TrEMBL top hitse value%identityAlignment
A0A0A0L9U8 Uncharacterized protein9.4e-1893.33Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACAVLFAAATV+AVVA DEALAPAPGPSSGA IG+PAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
A0A5A7U280 Arabinogalactan peptide 233.2e-1893.33Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACA+LFAAATVSA VA+D+ALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
A0A6J1HQG2 arabinogalactan peptide 23-like1.7e-1481.67Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKI CAVLFAAATV+A VAQ+EA APAPGP+S A +GLPAIGSL+GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
A0A6J1J6Y9 arabinogalactan peptide 23-like6.1e-1791.67Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACAVLFAAATVSAVVA DEALAPAPGPSSGAA GLPAIGS +GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
A0A6J1K873 arabinogalactan peptide 23-like2.0e-1583.33Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEM KI CA+LFAAATVSAVVA DEA APAPGP+SGA +GLPAIGSL+GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 231.1e-1268.33Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIAC VLFAAA+++AV+A +E  APAPGP+S A+  LPA+GSLVGASL+S  +YYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)1.7e-1167.21Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGP-SSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIAC V+FAAA+++AV+A  E  APAPGP +SGA++ +PA+GSLVGASL+S  AYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGP-SSGAAIGLPAIGSLVGASLLSFAAYYL
AT3G57690.1 arabinogalactan protein 238.2e-1468.33Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIAC VLFAAA+++AV+A +E  APAPGP+S A+  LPA+GSLVGASL+S  +YYL
Subjt:  MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGAAGAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTAGCTCAGGATGAGGCGTTGGCTCCAGCACCTGGACCAAGCAGCGGCGC
CGCCATTGGTCTGCCGGCAATTGGGTCTCTCGTCGGTGCTTCATTGCTGTCCTTCGCCGCTTACTACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATCCGCCAAAAAAAGCCCTAATTTCCCAACCACGAATCGAACTGGCTCTTCAATTTCCCTCCAAATAAGGAGGTTTCTTCTAAATATAGCCCTTTAAATTCAGCAACAAA
TTACCTTCCACCCAACATCCCTCCAGTTTCCACCTATAAAATCACACCCATTCCACCCTCATTTTCCTCAGGCAGCGATTTTCATAGCGAAGGCGTTTTTCGGTGATTTG
ATTTGATCCTTCCCTGTTCAATTCCTCTCACCGAATCAAAGGCCACAAAAAAAACAAAAATCAAAACCCCAAAAAAATCGCAATGGAGATGAAGAAGATCGCCTGCGCCG
TCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTAGCTCAGGATGAGGCGTTGGCTCCAGCACCTGGACCAAGCAGCGGCGCCGCCATTGGTCTGCCGGCAATTGGGTCT
CTCGTCGGTGCTTCATTGCTGTCCTTCGCCGCTTACTACTTGTAATGATGGAATTTGATAATGGGGATATTGAAGGAGAGGAAATGAATGATGAGAGATTTGGTTAATAT
GCTGTTGATATTTTATATGATGGGAAGAAGAATTTTCTGGGTGCTTTATTCTAAGTTTATTTATTTATTTAAGCATTGTTTTCAAAATTGGGAAAATTCGATGATCAGTA
GTAATCAATAAATAATACGTCTCATTAATT
Protein sequenceShow/hide protein sequence
MEMKKIACAVLFAAATVSAVVAQDEALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL