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PI0018739 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018739
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr05:8675457..8675852
RNA-Seq ExpressionPI0018739
SyntenyPI0018739
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049770.1 hypothetical protein E6C27_scaffold76G001230 [Cucumis melo var. makuwa]9.4e-4175.7Show/hide
Query:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA
        V+WKK+RF+F+  V+DEQFV+G L+DL SGV VEV CVYASNSN++RR+LWRRLVEITS+WS+PGVVMGDFNAIRVHSEA GGSP+ G++E+FDLAIRDA
Subjt:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA

Query:  DLVEPAV
        DL+EP+V
Subjt:  DLVEPAV
KAA0059841.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-4076.64Show/hide
Query:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA
        V+WKK+RF+F+ RVVDEQFV+G L+DL  GV VEV CVYASNSN++RR+LW RLVE TS+WSSPGVVMGDFNAIRVHSEA GGSP+ G++E+FDLAIRDA
Subjt:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA

Query:  DLVEPAV
        DLVEP+V
Subjt:  DLVEPAV
KAA0062319.1 hypothetical protein E6C27_scaffold154G00700 [Cucumis melo var. makuwa]3.0e-3974.77Show/hide
Query:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA
        V+WKK+RF+F+  V+DEQFV+G L+DL  GV VEV CVYASNSN++RR+LWRRLVEITS+WS PGVVMGDFNAIRVHSEA GGSP+ G++E+FDLAI DA
Subjt:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA

Query:  DLVEPAV
        DLVEP+V
Subjt:  DLVEPAV
KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]3.9e-3976.64Show/hide
Query:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA
        VVWKK+RF+F+  VVDEQFV+G L+DL SGV VEV CVYASNSN++RR+LWRRLVEITS WSSP VVMGDFNAIRVH EA GGSP+ G++E+FDLA RDA
Subjt:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA

Query:  DLVEPAV
        DLVEP+V
Subjt:  DLVEPAV
XP_008466769.1 PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]2.7e-4076.64Show/hide
Query:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA
        V+WKK+RF+F+ RVVDEQFV+G L+DL  GV VEV CVYASNSN++RR+LW RLVE TS+WSSPGVVMGDFNAIRVHSEA GGSP+ G++E+FDLAIRDA
Subjt:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA

Query:  DLVEPAV
        DLVEP+V
Subjt:  DLVEPAV
TrEMBL top hitse value%identityAlignment
A0A1S3CRZ6 uncharacterized protein LOC1035041001.3e-4076.64Show/hide
Query:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA
        V+WKK+RF+F+ RVVDEQFV+G L+DL  GV VEV CVYASNSN++RR+LW RLVE TS+WSSPGVVMGDFNAIRVHSEA GGSP+ G++E+FDLAIRDA
Subjt:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA

Query:  DLVEPAV
        DLVEP+V
Subjt:  DLVEPAV
A0A5A7U3C2 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein4.6e-4175.7Show/hide
Query:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA
        V+WKK+RF+F+  V+DEQFV+G L+DL SGV VEV CVYASNSN++RR+LWRRLVEITS+WS+PGVVMGDFNAIRVHSEA GGSP+ G++E+FDLAIRDA
Subjt:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA

Query:  DLVEPAV
        DL+EP+V
Subjt:  DLVEPAV
A0A5A7V275 Reverse transcriptase1.3e-4076.64Show/hide
Query:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA
        V+WKK+RF+F+ RVVDEQFV+G L+DL  GV VEV CVYASNSN++RR+LW RLVE TS+WSSPGVVMGDFNAIRVHSEA GGSP+ G++E+FDLAIRDA
Subjt:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA

Query:  DLVEPAV
        DLVEP+V
Subjt:  DLVEPAV
A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein1.9e-3976.64Show/hide
Query:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA
        VVWKK+RF+F+  VVDEQFV+G L+DL SGV VEV CVYASNSN++RR+LWRRLVEITS WSSP VVMGDFNAIRVH EA GGSP+ G++E+FDLA RDA
Subjt:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA

Query:  DLVEPAV
        DLVEP+V
Subjt:  DLVEPAV
A0A5A7V9D6 Uncharacterized protein1.5e-3974.77Show/hide
Query:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA
        V+WKK+RF+F+  V+DEQFV+G L+DL  GV VEV CVYASNSN++RR+LWRRLVEITS+WS PGVVMGDFNAIRVHSEA GGSP+ G++E+FDLAI DA
Subjt:  VVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPVTGDIEEFDLAIRDA

Query:  DLVEPAV
        DLVEP+V
Subjt:  DLVEPAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAATTTTGGTTCAATTTCTGGGAGGTTTGGGGACGCTTGGAGTTACTCTTGTAGTTATAGCAGAAGTGGTGTGGAAGAAGGATAGGTTTGCTTTTACTCCTAG
AGTGGTGGATGAGCAGTTTGTTTCAGGTGTGCTTTCTGATTTGCATTCTGGTGTAACTGTAGAGGTGTTATGTGTTTATGCCTCTAATAGTAATATGGACCGTCGTGTGC
TTTGGCGTCGGTTAGTTGAGATCACTTCTAGTTGGTCGAGTCCAGGTGTGGTTATGGGAGATTTTAATGCAATTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCCGGTT
ACTGGTGATATTGAGGAGTTTGATCTTGCTATTCGTGATGCTGACTTGGTTGAGCCAGCTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAATTTTGGTTCAATTTCTGGGAGGTTTGGGGACGCTTGGAGTTACTCTTGTAGTTATAGCAGAAGTGGTGTGGAAGAAGGATAGGTTTGCTTTTACTCCTAG
AGTGGTGGATGAGCAGTTTGTTTCAGGTGTGCTTTCTGATTTGCATTCTGGTGTAACTGTAGAGGTGTTATGTGTTTATGCCTCTAATAGTAATATGGACCGTCGTGTGC
TTTGGCGTCGGTTAGTTGAGATCACTTCTAGTTGGTCGAGTCCAGGTGTGGTTATGGGAGATTTTAATGCAATTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCCGGTT
ACTGGTGATATTGAGGAGTTTGATCTTGCTATTCGTGATGCTGACTTGGTTGAGCCAGCTGTTTAG
Protein sequenceShow/hide protein sequence
MKEILVQFLGGLGTLGVTLVVIAEVVWKKDRFAFTPRVVDEQFVSGVLSDLHSGVTVEVLCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAIRVHSEACGGSPV
TGDIEEFDLAIRDADLVEPAV