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PI0018778 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018778
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAT4g32400/F8B4_100, related
Genome locationchr03:8293421..8295046
RNA-Seq ExpressionPI0018778
SyntenyPI0018778
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CEL65752.1 TPA: AT4g32400/F8B4_100, related [Neospora caninum Liverpool]4.9e-0449.59Show/hide
Query:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLSSAAPSCLFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSAPS
        PS+   L +SS P++S  PS+PS PS PS PSS  PSC SS++PS      PS+LSCPS  SCPS+PS PS+PSCPS+PS PSS  P+  S  SC S+  
Subjt:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLSSAAPSCLFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSAPS

Query:  PVLAEPVRAELSVLAHPHRVVCS
           +    A    L HP  V  S
Subjt:  PVLAEPVRAELSVLAHPHRVVCS

XP_003881826.1 AT4g32400/F8B4_100, related [Neospora caninum Liverpool]4.9e-0449.59Show/hide
Query:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLSSAAPSCLFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSAPS
        PS+   L +SS P++S  PS+PS PS PS PSS  PSC SS++PS      PS+LSCPS  SCPS+PS PS+PSCPS+PS PSS  P+  S  SC S+  
Subjt:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLSSAAPSCLFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSAPS

Query:  PVLAEPVRAELSVLAHPHRVVCS
           +    A    L HP  V  S
Subjt:  PVLAEPVRAELSVLAHPHRVVCS

XP_032824000.1 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like [Petromyzon marinus]6.1e-0761.45Show/hide
Query:  RRPSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLSSAAPSCLFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSC
        RR S +SC S SS PS SSCPS  SCPS  SCPS +  SC S   PSC    CPS  SCPS +SCPS PSC S PSC S PSC
Subjt:  RRPSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLSSAAPSCLFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSC

XP_038281560.1 putative protein TPRXL [Canis lupus familiaris]2.9e-0446.15Show/hide
Query:  PPSVRAELSIRRPSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAA-PSCLSSAAPSCLFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAA-
        P S  A  S   PS+SS  S+SS PS+SS PS+PS PS+PS PSS++ PS  SS+APS   V  PS+ S PS+SS PS+ S PS+PS PS+PS PSS++ 
Subjt:  PPSVRAELSIRRPSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAA-PSCLSSAAPSCLFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAA-

Query:  PSCLSSPSCLSAPSPVLAEPVRAELSVLAHPHRVVCSSAVRLRRAVRPPSVRAELSVRVELSVRAELSV
        PS  S+PS  SAPS   A    +  S  + P     SSA     A   PS  +  SV    S  +  SV
Subjt:  PSCLSSPSCLSAPSPVLAEPVRAELSVLAHPHRVVCSSAVRLRRAVRPPSVRAELSVRVELSVRAELSV

XP_038840173.1 leucine-rich repeat extensin-like protein 5, partial [Salvelinus namaycush]1.4e-1162.38Show/hide
Query:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLSSAAPSCLFV-RCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSAP
        P A SC  A S+P A SCP APSCP APSCP   APSC    APSC +   CP A SCP A SCP APSCP APSCP  PSCP   APSC  +PSC  AP
Subjt:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLSSAAPSCLFV-RCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSAP

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A3B5QDD4 Uncharacterized protein2.1e-0546.43Show/hide
Query:  PPSVRAELSIRRPSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLSSAAPSCLFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPS
        P S     S   P ++SC  ++S P ++SCP + SCPSA SCP SA  SC  SA+       CP + SCPSA+SCP + SCP + SCP + SCP SA  S
Subjt:  PPSVRAELSIRRPSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLSSAAPSCLFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPS

Query:  CLSSPSCLSAPS
        C  S SC  + S
Subjt:  CLSSPSCLSAPS

A0A672FAB9 Uncharacterized protein3.6e-1364.71Show/hide
Query:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLS-SAAPSC-LFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSA
        PS SSC S  S PS SSC S PSCPS PSC  S+ PSC S S+ PSC     CPS  SCPS SSCPS PSCPS PSC S PSCPS   PSC S PSC S 
Subjt:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLS-SAAPSC-LFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSA

Query:  PS
        PS
Subjt:  PS

A0A672FAI0 Uncharacterized protein3.6e-1364.71Show/hide
Query:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLS-SAAPSC-LFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSA
        PS SSC S  S PS SSC S PSCPS PSC  S+ PSC S S+ PSC     CPS  SCPS SSCPS PSCPS PSC S PSCPS   PSC S PSC S 
Subjt:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLS-SAAPSC-LFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSA

Query:  PS
        PS
Subjt:  PS

A0A672FF28 Uncharacterized protein3.6e-1364.71Show/hide
Query:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLS-SAAPSC-LFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSA
        PS SSC S  S PS SSC S PSCPS PSC  S+ PSC S S+ PSC     CPS  SCPS SSCPS PSCPS PSC S PSCPS   PSC S PSC S 
Subjt:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLS-SAAPSC-LFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSA

Query:  PS
        PS
Subjt:  PS

A0A672FV89 Uncharacterized protein3.6e-1364.71Show/hide
Query:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLS-SAAPSC-LFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSA
        PS SSC S  S PS SSC S PSCPS PSC  S+ PSC S S+ PSC     CPS  SCPS SSCPS PSCPS PSC S PSCPS   PSC S PSC S 
Subjt:  PSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLS-SAAPSC-LFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSSAAPSCLSSPSCLSA

Query:  PS
        PS
Subjt:  PS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTCAAGCATATTGATGCTACTGATCTCCACATATTGAAAGCCTTAGGACGGTGGAGAACGGAGAACAAACAACGATGGAGAAAATCAGACTATGCGCTCAGCAA
TTTAATGTTCCCCAAGAGAAACCCTTTGAGTTCCCCTGGAAGCAATCCTCCATTGAAGAGAAACAAAAATCTCCGGCCGTCAACGTCTCCGCGCCTACAATCGTTCGCGA
GCCGTCGCGTCGAGCTGTCTGTCCTCGCCCGCGCCGAGCTGTCCGTCCTCGTCGAGCCCGTCCGCACCGAGTTGTCTATCCGCACCGAGTTGTCTATCCGCACCGAGTTG
TCTATCCTCGCCGAGCCTGTCCGCACCGAGTTGTCTGTTCGTCCGCCGTCCGTCCGCGCCGAGCTGTCCATCCGCCGTCCGTCCGCGTCGAGCTGTCTGTCCGCGTCGAG
CTATCCGTCCGCGTCGAGCTGTCCGTCCGCGCCGAGCTGTCCGTCCGCACCGAGCTGTCCGTCCTCGGCCGCACCGAGCTGTCTGTCCTCGGCCGCACCGAGCTGTCTGT
TCGTCCGCTGTCCGTCCGCGTTGAGCTGTCCGTCCGCGTCGAGCTGTCCGTCCGCGCCGAGCTGTCCGTCCGCGCCGAGCTGTCCGTCCACGCCGAGCTGTCCGTCCTCG
GCCGCACCGAGCTGTCTGTCCTCGCCGAGTTGTCTGTCCGCGCCGAGCCCCGTCCTTGCTGAGCCCGTCCGCGCCGAGCTGTCCGTCCTCGCCCATCCGCACCGAGTTGT
CTGTTCGTCCGCCGTCCGTCTGCGCCGAGCTGTCCGTCCGCCGTCCGTCCGCGCCGAGCTGTCCGTTCGCGTCGAGCTGTCCGTCCGCGCCGAGCTGTCCGTCCTTGGCC
GCACCGAGCTGTCCGTCCTCGGCCGCACCGAGCTGTCTGTCCTCGGCCGCACCGAGCTGTCTGTCCTCGGTCGCACCGAGCTGTCTGTCCTCGGTCGCACCGAGCTGTCT
GTCCTCGCCGAGTTGTCTGTCCGCACCGAGCCCCGTCCTCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTCAAGCATATTGATGCTACTGATCTCCACATATTGAAAGCCTTAGGACGGTGGAGAACGGAGAACAAACAACGATGGAGAAAATCAGACTATGCGCTCAGCAA
TTTAATGTTCCCCAAGAGAAACCCTTTGAGTTCCCCTGGAAGCAATCCTCCATTGAAGAGAAACAAAAATCTCCGGCCGTCAACGTCTCCGCGCCTACAATCGTTCGCGA
GCCGTCGCGTCGAGCTGTCTGTCCTCGCCCGCGCCGAGCTGTCCGTCCTCGTCGAGCCCGTCCGCACCGAGTTGTCTATCCGCACCGAGTTGTCTATCCGCACCGAGTTG
TCTATCCTCGCCGAGCCTGTCCGCACCGAGTTGTCTGTTCGTCCGCCGTCCGTCCGCGCCGAGCTGTCCATCCGCCGTCCGTCCGCGTCGAGCTGTCTGTCCGCGTCGAG
CTATCCGTCCGCGTCGAGCTGTCCGTCCGCGCCGAGCTGTCCGTCCGCACCGAGCTGTCCGTCCTCGGCCGCACCGAGCTGTCTGTCCTCGGCCGCACCGAGCTGTCTGT
TCGTCCGCTGTCCGTCCGCGTTGAGCTGTCCGTCCGCGTCGAGCTGTCCGTCCGCGCCGAGCTGTCCGTCCGCGCCGAGCTGTCCGTCCACGCCGAGCTGTCCGTCCTCG
GCCGCACCGAGCTGTCTGTCCTCGCCGAGTTGTCTGTCCGCGCCGAGCCCCGTCCTTGCTGAGCCCGTCCGCGCCGAGCTGTCCGTCCTCGCCCATCCGCACCGAGTTGT
CTGTTCGTCCGCCGTCCGTCTGCGCCGAGCTGTCCGTCCGCCGTCCGTCCGCGCCGAGCTGTCCGTTCGCGTCGAGCTGTCCGTCCGCGCCGAGCTGTCCGTCCTTGGCC
GCACCGAGCTGTCCGTCCTCGGCCGCACCGAGCTGTCTGTCCTCGGCCGCACCGAGCTGTCTGTCCTCGGTCGCACCGAGCTGTCTGTCCTCGGTCGCACCGAGCTGTCT
GTCCTCGCCGAGTTGTCTGTCCGCACCGAGCCCCGTCCTCGCTGA
Protein sequenceShow/hide protein sequence
MFFKHIDATDLHILKALGRWRTENKQRWRKSDYALSNLMFPKRNPLSSPGSNPPLKRNKNLRPSTSPRLQSFASRRVELSVLARAELSVLVEPVRTELSIRTELSIRTEL
SILAEPVRTELSVRPPSVRAELSIRRPSASSCLSASSYPSASSCPSAPSCPSAPSCPSSAAPSCLSSAAPSCLFVRCPSALSCPSASSCPSAPSCPSAPSCPSTPSCPSS
AAPSCLSSPSCLSAPSPVLAEPVRAELSVLAHPHRVVCSSAVRLRRAVRPPSVRAELSVRVELSVRAELSVLGRTELSVLGRTELSVLGRTELSVLGRTELSVLGRTELS
VLAELSVRTEPRPR