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PI0018787 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018787
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr09:11624962..11626743
RNA-Seq ExpressionPI0018787
SyntenyPI0018787
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025749.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]6.2e-1460.47Show/hide
Query:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIEGCS
        + AKR+EAESSN+KKNE SKE KE                +KDCV+KKVM+IRN IIDS+ ECDE++A LEEE D HDDEYIEG S
Subjt:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIEGCS

KAA0051909.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]6.0e-0946.39Show/hide
Query:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVH-DDEYIEGCSLLERMRLKLM
        +AA++VE ESSNTKK E SKEV+E                +KDC++K+VM++RN +IDSE EC+E +AQLEEE +   DDEYIE  S + ++  +++
Subjt:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVH-DDEYIEGCSLLERMRLKLM

KAA0066461.1 uncharacterized protein E6C27_scaffold21G005620 [Cucumis melo var. makuwa]4.6e-0947.42Show/hide
Query:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVH-DDEYIEGCSLLERMRLKLM
        +AA++VE ESSNTKK E+SKEV+E                +KDC++K+VM++RN +IDSE EC+E +AQLEEE +   DDEYIE  S +  +  +L+
Subjt:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVH-DDEYIEGCSLLERMRLKLM

KGN53753.1 hypothetical protein Csa_014547 [Cucumis sativus]9.3e-1057.69Show/hide
Query:  VEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIE
        +E ESSNTK N+ SKEVKE                +KD V+KKVM+IRN IIDS+ ECDE++A LEEE D HDDEYIE
Subjt:  VEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIE

TYK06180.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]9.0e-1359.3Show/hide
Query:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIEGCS
        + AKR+EAESSN+KKNE SKE KE                +KDCV+KKVM+IRN IIDS+ E DE++A LEEE D HDDEYIEG S
Subjt:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIEGCS

TrEMBL top hitse value%identityAlignment
A0A0A0KW07 Uncharacterized protein4.5e-1057.69Show/hide
Query:  VEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIE
        +E ESSNTK N+ SKEVKE                +KD V+KKVM+IRN IIDS+ ECDE++A LEEE D HDDEYIE
Subjt:  VEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIE

A0A5A7SKE7 Transposon Ty3-I Gag-Pol polyprotein3.0e-1460.47Show/hide
Query:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIEGCS
        + AKR+EAESSN+KKNE SKE KE                +KDCV+KKVM+IRN IIDS+ ECDE++A LEEE D HDDEYIEG S
Subjt:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIEGCS

A0A5A7UEI2 Transposon Ty3-I Gag-Pol polyprotein2.9e-0946.39Show/hide
Query:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVH-DDEYIEGCSLLERMRLKLM
        +AA++VE ESSNTKK E SKEV+E                +KDC++K+VM++RN +IDSE EC+E +AQLEEE +   DDEYIE  S + ++  +++
Subjt:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVH-DDEYIEGCSLLERMRLKLM

A0A5A7VLF9 CCHC-type domain-containing protein2.2e-0947.42Show/hide
Query:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVH-DDEYIEGCSLLERMRLKLM
        +AA++VE ESSNTKK E+SKEV+E                +KDC++K+VM++RN +IDSE EC+E +AQLEEE +   DDEYIE  S +  +  +L+
Subjt:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVH-DDEYIEGCSLLERMRLKLM

A0A5D3C4C3 Transposon Ty3-I Gag-Pol polyprotein4.3e-1359.3Show/hide
Query:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIEGCS
        + AKR+EAESSN+KKNE SKE KE                +KDCV+KKVM+IRN IIDS+ E DE++A LEEE D HDDEYIEG S
Subjt:  MAAKRVEAESSNTKKNETSKEVKE----------------NKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIEGCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCAAGAGAGTGGAGGCCGAGAGCTCTAACACTAAAAAGAATGAAACTTCAAAGGAGGTAAAGGAGAACAAAGATTGTGTCAGTAAAAAAGTCATGTTGATAAG
AAATAAGATAATTGATTCGGAATACGAATGTGATGAGTATAATGCACAACTTGAGGAAGAACCCGATGTACATGACGATGAGTACATTGAAGGATGTTCATTACTGGAAA
GAATGAGGTTAAAGTTGATGAAGAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCAAGAGAGTGGAGGCCGAGAGCTCTAACACTAAAAAGAATGAAACTTCAAAGGAGGTAAAGGAGAACAAAGATTGTGTCAGTAAAAAAGTCATGTTGATAAG
AAATAAGATAATTGATTCGGAATACGAATGTGATGAGTATAATGCACAACTTGAGGAAGAACCCGATGTACATGACGATGAGTACATTGAAGGATGTTCATTACTGGAAA
GAATGAGGTTAAAGTTGATGAAGAAAAGGTAA
Protein sequenceShow/hide protein sequence
MAAKRVEAESSNTKKNETSKEVKENKDCVSKKVMLIRNKIIDSEYECDEYNAQLEEEPDVHDDEYIEGCSLLERMRLKLMKKR