; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0018791 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018791
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr03:13575647..13576936
RNA-Seq ExpressionPI0018791
SyntenyPI0018791
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033247.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.6e-2066.15Show/hide
Query:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
        G  +KV KCGVCGLVGHPNDKCP ++E+ N++RKYDPH NTYN+GWRDNPNLRWG   +   + P
Subjt:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.1e-2166.15Show/hide
Query:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
        G  +KV KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNPNLRWG   +   + P
Subjt:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.2e-2164.62Show/hide
Query:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
        G  +KV KCGVCGLVGHPNDKCP+++E+ N+++KYDPH NTYN+GWRDNPNLRWG   +   + P
Subjt:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
TYK19600.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.0e-2166.15Show/hide
Query:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
        G  +KV KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNPNLRWG   +   + P
Subjt:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]9.2e-2164.62Show/hide
Query:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
        G  +KV KCGVCGLVGHPNDKCP+++E+ N+++KYDPH NTYN+GWRDNPNLRWG   +   + P
Subjt:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
TrEMBL top hitse value%identityAlignment
A0A1S4E3R2 uncharacterized protein LOC1079919104.4e-2164.62Show/hide
Query:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
        G  +KV KCGVCGLVGHPNDKCP+++E+ N+++KYDPH NTYN+GWRDNPNLRWG   +   + P
Subjt:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
A0A5A7SVA1 Retrotransposon gag protein7.6e-2166.15Show/hide
Query:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
        G  +KV KCGVCGLVGHPNDKCP ++E+ N++RKYDPH NTYN+GWRDNPNLRWG   +   + P
Subjt:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
A0A5D3CRR8 Retrotransposon gag protein1.5e-2166.15Show/hide
Query:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
        G  +KV KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNPNLRWG   +   + P
Subjt:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
A0A5D3D815 Retrotransposon gag protein3.4e-2166.15Show/hide
Query:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
        G  +KV KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNPNLRWG   +   + P
Subjt:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
A0A5D3DCG3 Retrotransposon gag protein4.4e-2164.62Show/hide
Query:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
        G  +KV KCGVCGLVGHPNDKCP+++E+ N+++KYDPH NTYN+GWRDNPNLRWG   +   + P
Subjt:  GGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGTTGCCGGGGAGCGACGGTGGATCTGTTAAAGTTGCAAAATGTGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAATGCCCTGACTTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCTCATAGTAACACTTACAATGCCGGTTGGAGAGACAACCCTAATCTAAGATGGGGAACAACAACCAAAGACCCTCGCAAGCAACCTC
TTATTCAAACAATCAAGGTACTAACTTGGAAGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCGTTGCCGGGGAGCGACGGTGGATCTGTTAAAGTTGCAAAATGTGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAATGCCCTGACTTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCTCATAGTAACACTTACAATGCCGGTTGGAGAGACAACCCTAATCTAAGATGGGGAACAACAACCAAAGACCCTCGCAAGCAACCTC
TTATTCAAACAATCAAGGTACTAACTTGGAAGATTTAG
Protein sequenceShow/hide protein sequence
MAPLPGSDGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWGTTTKDPRKQPLIQTIKVLTWKI