| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0054754.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | 2.7e-41 | 48.08 | Show/hide |
Query: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKM----------------------------GDPKLQWT
MV +QMEER+EGTEKE+LGLKE+M+++K+ ++R+AE++R++ SY+++E+SGT DGSVMKLK KM G+ W
Subjt: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKM----------------------------GDPKLQWT
Query: TR-------------RALLIGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVNDRNIP
R + + + + G++LIRI QDG+Y+ YVKKF+NY A LP +AE+VL DAF+ GLE +LQAEV SR+PQTLE CM+E QLVNDRN+
Subjt: TR-------------RALLIGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVNDRNIP
Query: LKLAEVEL
LKLA EL
Subjt: LKLAEVEL
|
|
| KAA0057464.1 retrotransposon protein [Cucumis melo var. makuwa] | 6.7e-40 | 48.33 | Show/hide |
Query: MRVVTRLMVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKMGD-------------------PKLQWTTR
+RV+TR M + +E+ +EGTE EV+GLKE+MLK+KK++DR+ E++REN SYR+RE+S TSDGSVMKLK KM + +W+
Subjt: MRVVTRLMVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKMGD-------------------PKLQWTTR
Query: RALL----------------IGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVNDRNI
R + G + G++LIRI QDG+Y++YVKK +NY L ++AE+VL DAFV LE +LQAEV SR+PQTLE CM+E QLVND N+
Subjt: RALL----------------IGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVNDRNI
Query: PLKLAEVEL
LKLA EL
Subjt: PLKLAEVEL
|
|
| KAA0063772.1 retrotransposon protein [Cucumis melo var. makuwa] | 3.0e-40 | 44.84 | Show/hide |
Query: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKMGDPKLQWTT-------------RRALLIG-------
M +QMEER++GTEKE++GLKE+ML++KKAV+R+A++++E+ SY+++E+SGTS+GSVMK+K KM + +L T + + +G
Subjt: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKMGDPKLQWTT-------------RRALLIG-------
Query: ------------------------------------AREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLE
+ G++LIRI Q+G+Y++YVKKF+ Y A LP +AE+VL+DAFV GLEPSLQAEV SR+PQTLE
Subjt: ------------------------------------AREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLE
Query: ACMREPQLVNDRNIPLKLAEVEL
CMRE QL+NDRN+ LKLA +EL
Subjt: ACMREPQLVNDRNIPLKLAEVEL
|
|
| TYK03703.1 retrotransposon protein [Cucumis melo var. makuwa] | 5.1e-40 | 46.43 | Show/hide |
Query: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSG-TSDGSVMKLKRKMGDPKL------------------------------
M +QMEER+EGTEKE+L LKE++L++KKAV+R+A++++E+ SY+++E+SG TSDGSVMKLK KM + +L
Subjt: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSG-TSDGSVMKLKRKMGDPKL------------------------------
Query: ----------QWTTRRALL----------------IGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTL
+W+ R + G + G++LIRI QDG+Y+ YVKKF+ Y A LP +AE+VL+DAFV GLEPSLQAEV SR+PQTL
Subjt: ----------QWTTRRALL----------------IGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTL
Query: EACMREPQLVNDRNIPLKLAEVEL
E CMRE QLVNDRN+ LKL ++EL
Subjt: EACMREPQLVNDRNIPLKLAEVEL
|
|
| TYK05440.1 retrotransposon protein [Cucumis melo var. makuwa] | 1.3e-40 | 47.64 | Show/hide |
Query: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKM----------------------------GDPKLQWT
M +QMEERLEGTEKEVL LKE+ML++KK++DR+A+++R+ SY+++E+SGTSDGS+MK+K KM G+ W
Subjt: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKM----------------------------GDPKLQWT
Query: TRRALLI-----------------GAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVND
R + + G + G++LIRI Q+G+YS+YVKKF+NY A LP++AE+VL DAF+ GLEP+LQAEV SR+PQTLE CM QLVND
Subjt: TRRALLI-----------------GAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVND
Query: RNIPLKLAEVEL
RN+ LKLA+ E+
Subjt: RNIPLKLAEVEL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UHY0 Transposon Ty3-G Gag-Pol polyprotein | 1.3e-41 | 48.08 | Show/hide |
Query: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKM----------------------------GDPKLQWT
MV +QMEER+EGTEKE+LGLKE+M+++K+ ++R+AE++R++ SY+++E+SGT DGSVMKLK KM G+ W
Subjt: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKM----------------------------GDPKLQWT
Query: TR-------------RALLIGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVNDRNIP
R + + + + G++LIRI QDG+Y+ YVKKF+NY A LP +AE+VL DAF+ GLE +LQAEV SR+PQTLE CM+E QLVNDRN+
Subjt: TR-------------RALLIGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVNDRNIP
Query: LKLAEVEL
LKLA EL
Subjt: LKLAEVEL
|
|
| A0A5A7UQT2 Retrotransposon protein | 3.2e-40 | 48.33 | Show/hide |
Query: MRVVTRLMVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKMGD-------------------PKLQWTTR
+RV+TR M + +E+ +EGTE EV+GLKE+MLK+KK++DR+ E++REN SYR+RE+S TSDGSVMKLK KM + +W+
Subjt: MRVVTRLMVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKMGD-------------------PKLQWTTR
Query: RALL----------------IGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVNDRNI
R + G + G++LIRI QDG+Y++YVKK +NY L ++AE+VL DAFV LE +LQAEV SR+PQTLE CM+E QLVND N+
Subjt: RALL----------------IGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVNDRNI
Query: PLKLAEVEL
LKLA EL
Subjt: PLKLAEVEL
|
|
| A0A5A7V689 Retrotransposon protein | 1.4e-40 | 44.84 | Show/hide |
Query: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKMGDPKLQWTT-------------RRALLIG-------
M +QMEER++GTEKE++GLKE+ML++KKAV+R+A++++E+ SY+++E+SGTS+GSVMK+K KM + +L T + + +G
Subjt: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKMGDPKLQWTT-------------RRALLIG-------
Query: ------------------------------------AREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLE
+ G++LIRI Q+G+Y++YVKKF+ Y A LP +AE+VL+DAFV GLEPSLQAEV SR+PQTLE
Subjt: ------------------------------------AREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLE
Query: ACMREPQLVNDRNIPLKLAEVEL
CMRE QL+NDRN+ LKLA +EL
Subjt: ACMREPQLVNDRNIPLKLAEVEL
|
|
| A0A5D3BVG6 Retrotransposon protein | 2.5e-40 | 46.43 | Show/hide |
Query: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSG-TSDGSVMKLKRKMGDPKL------------------------------
M +QMEER+EGTEKE+L LKE++L++KKAV+R+A++++E+ SY+++E+SG TSDGSVMKLK KM + +L
Subjt: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSG-TSDGSVMKLKRKMGDPKL------------------------------
Query: ----------QWTTRRALL----------------IGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTL
+W+ R + G + G++LIRI QDG+Y+ YVKKF+ Y A LP +AE+VL+DAFV GLEPSLQAEV SR+PQTL
Subjt: ----------QWTTRRALL----------------IGAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTL
Query: EACMREPQLVNDRNIPLKLAEVEL
E CMRE QLVNDRN+ LKL ++EL
Subjt: EACMREPQLVNDRNIPLKLAEVEL
|
|
| A0A5D3C259 Retrotransposon protein | 6.5e-41 | 47.64 | Show/hide |
Query: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKM----------------------------GDPKLQWT
M +QMEERLEGTEKEVL LKE+ML++KK++DR+A+++R+ SY+++E+SGTSDGS+MK+K KM G+ W
Subjt: MVNKQMEERLEGTEKEVLGLKEIMLKLKKAVDRMAEDIRENSSYRRREKSGTSDGSVMKLKRKM----------------------------GDPKLQWT
Query: TRRALLI-----------------GAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVND
R + + G + G++LIRI Q+G+YS+YVKKF+NY A LP++AE+VL DAF+ GLEP+LQAEV SR+PQTLE CM QLVND
Subjt: TRRALLI-----------------GAREFGSKLIRITQDGTYSNYVKKFLNYLALLPNIAENVLMDAFVIGLEPSLQAEVTSRYPQTLEACMREPQLVND
Query: RNIPLKLAEVEL
RN+ LKLA+ E+
Subjt: RNIPLKLAEVEL
|
|
