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PI0018855 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018855
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLeucine-rich repeat (LRR) family protein
Genome locationchr04:17444851..17445681
RNA-Seq ExpressionPI0018855
SyntenyPI0018855
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031700.1 hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa]1.1e-1441.21Show/hide
Query:  KKRVNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAE--------HK
        K  VNLG +I  SILSWM+ P+G+MPFPSTIEALC+KAV  L A    PI G + +Q  LN+ IT H +KE ER  KTL        +A          +
Subjt:  KKRVNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAE--------HK

Query:  RKSPVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQ------PPRHSS
        +K+   AS+   K K+ + D    P PL I+   + P+   PPP   K+  P       PPRH S
Subjt:  RKSPVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQ------PPRHSS

KAA0050752.1 hypothetical protein E6C27_scaffold46449G00010 [Cucumis melo var. makuwa]4.3e-1144.86Show/hide
Query:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP
        VNLG +I  SILS M+APK +MPFP TI+ALC+K V  L      PI   +C+Q+ LN+ IT H +KE +R  KTL        + E K  SP     PP
Subjt:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP

Query:  PKVKKAR
        P +K+ +
Subjt:  PKVKKAR

KAA0057279.1 hypothetical protein E6C27_scaffold280G001200 [Cucumis melo var. makuwa]7.3e-1136.98Show/hide
Query:  KKRVNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVAS
        K  VNLG +I  SILS M APK +MPFP TI+ALC+KAV  L      PI  G+C Q  LN+ I  H +KE ER  KTL        + E +      AS
Subjt:  KKRVNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVAS

Query:  TPPPKVKK------------------ARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIPSTPPSPILSPRHSPLPHILS
        +PPP +K+                  AR D+   P PL I+     P+    PP ++KS +P      SP   T P P   P H+ + H+++
Subjt:  TPPPKVKK------------------ARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIPSTPPSPILSPRHSPLPHILS

KAA0057358.1 hypothetical protein E6C27_scaffold280G002190 [Cucumis melo var. makuwa]2.8e-1043.93Show/hide
Query:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP
        VNLG +I  SILS M APK +MPFP TI+ALC+K V  L      PI   +C+Q  LN+ I  H +KE +R  KTL        + E K  SP     PP
Subjt:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP

Query:  PKVKKAR
        P +K+ +
Subjt:  PKVKKAR

TYK30047.1 hypothetical protein E5676_scaffold216G00150 [Cucumis melo var. makuwa]2.8e-1043.93Show/hide
Query:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP
        VNLG +I  SILS M APK +MPFP TI+ALC+K V  L      PI   +C+Q  LN+ I  H +KE +R  KTL        + E K  SP     PP
Subjt:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP

Query:  PKVKKAR
        P +K+ +
Subjt:  PKVKKAR

TrEMBL top hitse value%identityAlignment
A0A5A7SLS8 Uncharacterized protein5.3e-1541.21Show/hide
Query:  KKRVNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAE--------HK
        K  VNLG +I  SILSWM+ P+G+MPFPSTIEALC+KAV  L A    PI G + +Q  LN+ IT H +KE ER  KTL        +A          +
Subjt:  KKRVNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAE--------HK

Query:  RKSPVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQ------PPRHSS
        +K+   AS+   K K+ + D    P PL I+   + P+   PPP   K+  P       PPRH S
Subjt:  RKSPVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQ------PPRHSS

A0A5A7U4J2 Uncharacterized protein2.1e-1144.86Show/hide
Query:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP
        VNLG +I  SILS M+APK +MPFP TI+ALC+K V  L      PI   +C+Q+ LN+ IT H +KE +R  KTL        + E K  SP     PP
Subjt:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP

Query:  PKVKKAR
        P +K+ +
Subjt:  PKVKKAR

A0A5A7UQF9 Uncharacterized protein1.4e-1043.93Show/hide
Query:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP
        VNLG +I  SILS M APK +MPFP TI+ALC+K V  L      PI   +C+Q  LN+ I  H +KE +R  KTL        + E K  SP     PP
Subjt:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP

Query:  PKVKKAR
        P +K+ +
Subjt:  PKVKKAR

A0A5A7UUR1 Uncharacterized protein3.6e-1136.98Show/hide
Query:  KKRVNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVAS
        K  VNLG +I  SILS M APK +MPFP TI+ALC+KAV  L      PI  G+C Q  LN+ I  H +KE ER  KTL        + E +      AS
Subjt:  KKRVNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVAS

Query:  TPPPKVKK------------------ARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIPSTPPSPILSPRHSPLPHILS
        +PPP +K+                  AR D+   P PL I+     P+    PP ++KS +P      SP   T P P   P H+ + H+++
Subjt:  TPPPKVKK------------------ARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIPSTPPSPILSPRHSPLPHILS

A0A5D3E1R7 Uncharacterized protein1.4e-1043.93Show/hide
Query:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP
        VNLG +I  SILS M APK +MPFP TI+ALC+K V  L      PI   +C+Q  LN+ I  H +KE +R  KTL        + E K  SP     PP
Subjt:  VNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPP

Query:  PKVKKAR
        P +K+ +
Subjt:  PKVKKAR

SwissProt top hitse value%identityAlignment
Q9LJ64 Pollen-specific leucine-rich repeat extensin-like protein 16.3e-0542.4Show/hide
Query:  PVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIP--STPPSPILSPRHSPLPHILSPINVPNLSPRPP--SPPPT
        P V S PPP V      V   PPP   +HS   P+   PPPV     +P PP HS P P  S PP P+ SP   P   I SP   P  SP PP  SPPP 
Subjt:  PVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIP--STPPSPILSPRHSPLPHILSPINVPNLSPRPP--SPPPT

Query:  KSNSPPLPTNEPSPRRTMPHQPFRS
          +SPP P + P P    P  P  S
Subjt:  KSNSPPLPTNEPSPRRTMPHQPFRS

Arabidopsis top hitse value%identityAlignment
AT1G44191.1 ECA1 gametogenesis related family protein7.1e-0439.52Show/hide
Query:  STPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQN----KSSNPQP-PRHSSPIPSTPPSPILSPRHSPLPHILSPINVPNLSPRPPSPPPTKSN
        S PPPK         K PPP K       P K  PPP  +    K S P P P+ S P P  P SP  SP+ SP P   SP       P+P +PPPT   
Subjt:  STPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQN----KSSNPQP-PRHSSPIPSTPPSPILSPRHSPLPHILSPINVPNLSPRPPSPPPTKSN

Query:  SPP-----LPTNEPSPRRTMPHQP
        SPP      P  +PSP R  P  P
Subjt:  SPP-----LPTNEPSPRRTMPHQP

AT2G15880.1 Leucine-rich repeat (LRR) family protein1.1e-0443.44Show/hide
Query:  PVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIP-STPPSPILSPR---HSPLPHILSPINVPNLSPRPP---SP
        P V S PPP        V   PPP   +HS   P+   PPPV   S  P PP HS P P  +PP P+ SP    +SP P + SP   P  SP PP   SP
Subjt:  PVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIP-STPPSPILSPR---HSPLPHILSPINVPNLSPRPP---SP

Query:  P--PTKSNSPP--LPTNEPSPR
        P  P K +SPP   P N P PR
Subjt:  P--PTKSNSPP--LPTNEPSPR

AT3G19020.1 Leucine-rich repeat (LRR) family protein4.4e-0642.4Show/hide
Query:  PVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIP--STPPSPILSPRHSPLPHILSPINVPNLSPRPP--SPPPT
        P V S PPP V      V   PPP   +HS   P+   PPPV     +P PP HS P P  S PP P+ SP   P   I SP   P  SP PP  SPPP 
Subjt:  PVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIP--STPPSPILSPRHSPLPHILSPINVPNLSPRPP--SPPPT

Query:  KSNSPPLPTNEPSPRRTMPHQPFRS
          +SPP P + P P    P  P  S
Subjt:  KSNSPPLPTNEPSPRRTMPHQPFRS

AT4G33970.1 Leucine-rich repeat (LRR) family protein4.2e-0439.37Show/hide
Query:  KRKSPVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIP-STPPSPILSPR---HSPLPHILS-PINVPNLSPRPP
        KR+SP     PP  V      V   PPP   +HS   P+   PPP       P PP HS P P  +PP P+ SP    HSP P + S P   P  SP PP
Subjt:  KRKSPVVASTPPPKVKKARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIP-STPPSPILSPR---HSPLPHILS-PINVPNLSPRPP

Query:  ---SPPPTKSNSPPLPTNEPSPRRTMP
            PPP    SPP P   P P ++ P
Subjt:  ---SPPPTKSNSPPLPTNEPSPRRTMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGAAGCGCGTCAACCTTGGCGATCTAATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAAAGGCGTCATGCCCTTCCCTTCCACTATTGAAGCCCTTTG
CGTTAAGGCTGTGCGATTCCTATGCGCCGTCCAAGCAATTCCAATACCAGGCGGGCTGTGTAACCAAATGGCTTTAAACCGCATGATCACTTTTCATGGACACAAGGAAA
TGGAAAGGCGGGCAAAGACTTTGGGTGACACACTTGAAGGCATGGCCCAAGCAGAACACAAACGGAAGTCCCCAGTCGTCGCATCAACCCCTCCACCTAAAGTTAAAAAA
GCAAGGGTTGATGTGGCGAAGCAGCCACCACCACTAAAGATCATCCACTCCTCATCCCGCCCAATCAAGCGAGCTCCCCCACCAGTCCAAAACAAATCCAGTAACCCTCA
GCCTCCTCGCCATTCTTCGCCCATCCCATCCACACCACCTTCGCCAATCCTCTCTCCCCGCCATTCACCTCTCCCCCACATTCTTTCCCCCATCAACGTTCCTAACCTTT
CCCCACGACCGCCTTCCCCTCCGCCAACAAAATCCAATTCCCCACCCCTTCCTACAAACGAACCCTCTCCTCGGCGAACAATGCCCCACCAACCATTCAGGTCTCACCAC
TATCGCCACCACCACCTGCTTTGGATACTGCGCAAAATGTTGATGACCCACACGTTAAGGACAAAAACCCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCAT
ACCCCTACCGCCCAACCTTCCACCACACCCGGAGAAGATGAAGATTTGGGCGAATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGAAGCGCGTCAACCTTGGCGATCTAATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAAAGGCGTCATGCCCTTCCCTTCCACTATTGAAGCCCTTTG
CGTTAAGGCTGTGCGATTCCTATGCGCCGTCCAAGCAATTCCAATACCAGGCGGGCTGTGTAACCAAATGGCTTTAAACCGCATGATCACTTTTCATGGACACAAGGAAA
TGGAAAGGCGGGCAAAGACTTTGGGTGACACACTTGAAGGCATGGCCCAAGCAGAACACAAACGGAAGTCCCCAGTCGTCGCATCAACCCCTCCACCTAAAGTTAAAAAA
GCAAGGGTTGATGTGGCGAAGCAGCCACCACCACTAAAGATCATCCACTCCTCATCCCGCCCAATCAAGCGAGCTCCCCCACCAGTCCAAAACAAATCCAGTAACCCTCA
GCCTCCTCGCCATTCTTCGCCCATCCCATCCACACCACCTTCGCCAATCCTCTCTCCCCGCCATTCACCTCTCCCCCACATTCTTTCCCCCATCAACGTTCCTAACCTTT
CCCCACGACCGCCTTCCCCTCCGCCAACAAAATCCAATTCCCCACCCCTTCCTACAAACGAACCCTCTCCTCGGCGAACAATGCCCCACCAACCATTCAGGTCTCACCAC
TATCGCCACCACCACCTGCTTTGGATACTGCGCAAAATGTTGATGACCCACACGTTAAGGACAAAAACCCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCAT
ACCCCTACCGCCCAACCTTCCACCACACCCGGAGAAGATGAAGATTTGGGCGAATTATTAG
Protein sequenceShow/hide protein sequence
MMKKRVNLGDLIATSILSWMRAPKGVMPFPSTIEALCVKAVRFLCAVQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTLEGMAQAEHKRKSPVVASTPPPKVKK
ARVDVAKQPPPLKIIHSSSRPIKRAPPPVQNKSSNPQPPRHSSPIPSTPPSPILSPRHSPLPHILSPINVPNLSPRPPSPPPTKSNSPPLPTNEPSPRRTMPHQPFRSHH
YRHHHLLWILRKMLMTHTLRTKTLSLMKLARQLLRRIPLPPNLPPHPEKMKIWANY