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PI0018872 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018872
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSHSP domain-containing protein
Genome locationchr03:7884807..7885396
RNA-Seq ExpressionPI0018872
SyntenyPI0018872
Gene Ontology termsNA
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG7878849.1 unnamed protein product [Brassica rapa]7.6e-0435.63Show/hide
Query:  LFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLTVTFEKK
        L PK EWKD+       T+ LPGF+KE++++     +R I VTG++  G    +R N   T+  + L+D I     +N LT+T  K+
Subjt:  LFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLTVTFEKK

KAE8646641.1 hypothetical protein Csa_005322 [Cucumis sativus]7.8e-2561.82Show/hide
Query:  MSSKILDEDFKKAV-KSNYQLFPKDEWKD-EENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNT
        MSS+I+++D++  V + N Q FP   +++ EE NK SF+M LPGFSK+RLRINLNT+TR I+VTGQK++GLFNITRLN  VTIK+D LL+ +QAKLS++T
Subjt:  MSSKILDEDFKKAV-KSNYQLFPKDEWKD-EENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNT

Query:  LTVTFEKKNK
        L VTFEK+ K
Subjt:  LTVTFEKKNK

KAG6578833.1 Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.2e-0544.62Show/hide
Query:  MSSKILDEDFKKAVKSNYQLFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQK
        MSS+I+++D++   +S+    P  +W +EE++ +  +M LPGF K RL+I LN  TRT+ VTGQK
Subjt:  MSSKILDEDFKKAVKSNYQLFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQK

KAG7016359.1 hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-1648.11Show/hide
Query:  MSSKILDEDFKKAVKSNYQLFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLT
        MSS+I+++D++   +S+    P  +W +EE++ +  +M LPGF K RL+I LN  TRT+ VTGQK +GLFNI RLN  ++I D   LD + A+L D+TL 
Subjt:  MSSKILDEDFKKAVKSNYQLFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLT

Query:  VTFEKK
        VTF KK
Subjt:  VTFEKK

XP_022939359.1 uncharacterized protein LOC111445297 [Cucurbita moschata]5.6e-1547.17Show/hide
Query:  MSSKILDEDFKKAVKSNYQLFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLT
        MSS+I+++D+    +S+    P  +W +EE++ +  +M LPGF K +L+I LN  TRT+ VTGQK +GLFNI RLN  ++I D   LD + A+L D TL 
Subjt:  MSSKILDEDFKKAVKSNYQLFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLT

Query:  VTFEKK
        VTF KK
Subjt:  VTFEKK

TrEMBL top hitse value%identityAlignment
A0A078FA59 BnaA03g01510D protein3.7e-0435.63Show/hide
Query:  LFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLTVTFEKK
        L PK EWKD+       T+ LPGF+KE++++     +R I VTG++  G    +R N   T+  + L+D I     +N LT+T  K+
Subjt:  LFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLTVTFEKK

A0A0A0KB53 SHSP domain-containing protein3.8e-2561.82Show/hide
Query:  MSSKILDEDFKKAV-KSNYQLFPKDEWKD-EENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNT
        MSS+I+++D++  V + N Q FP   +++ EE NK SF+M LPGFSK+RLRINLNT+TR I+VTGQK++GLFNITRLN  VTIK+D LL+ +QAKLS++T
Subjt:  MSSKILDEDFKKAV-KSNYQLFPKDEWKD-EENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNT

Query:  LTVTFEKKNK
        L VTFEK+ K
Subjt:  LTVTFEKKNK

A0A6J0MTF1 inactive protein RESTRICTED TEV MOVEMENT 2-like3.7e-0436.47Show/hide
Query:  PKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLTVTFEKK
        PK EWKD+       T+ LPGF+KE++++     +R I VTG++  G    +R N   T+  + L+D I   L +N LT+T  K+
Subjt:  PKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLTVTFEKK

A0A6J1FGX8 uncharacterized protein LOC1114452972.7e-1547.17Show/hide
Query:  MSSKILDEDFKKAVKSNYQLFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLT
        MSS+I+++D+    +S+    P  +W +EE++ +  +M LPGF K +L+I LN  TRT+ VTGQK +GLFNI RLN  ++I D   LD + A+L D TL 
Subjt:  MSSKILDEDFKKAVKSNYQLFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLT

Query:  VTFEKK
        VTF KK
Subjt:  VTFEKK

M4CNN8 SHSP domain-containing protein3.7e-0435.63Show/hide
Query:  LFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLTVTFEKK
        L PK EWKD+       T+ LPGF+KE++++     +R I VTG++  G    +R N   T+  + L+D I     +N LT+T  K+
Subjt:  LFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLTVTFEKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCAAGATATTGGATGAAGATTTCAAAAAGGCAGTCAAATCAAATTATCAGTTGTTTCCAAAAGATGAATGGAAAGACGAAGAAAACAACAAAAAGTCATTTAC
CATGTCACTCCCAGGTTTTTCAAAGGAACGACTTCGAATCAACTTGAATACAAAAACAAGGACTATTATCGTTACAGGACAAAAAACAAATGGCTTATTCAATATTACTC
GTTTGAATGTACCTGTAACAATTAAAGACGACTACTTGTTAGACACAATACAAGCAAAGTTGTCCGATAACACTCTTACTGTCACATTTGAGAAGAAAAATAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGCAAGATATTGGATGAAGATTTCAAAAAGGCAGTCAAATCAAATTATCAGTTGTTTCCAAAAGATGAATGGAAAGACGAAGAAAACAACAAAAAGTCATTTAC
CATGTCACTCCCAGGTTTTTCAAAGGAACGACTTCGAATCAACTTGAATACAAAAACAAGGACTATTATCGTTACAGGACAAAAAACAAATGGCTTATTCAATATTACTC
GTTTGAATGTACCTGTAACAATTAAAGACGACTACTTGTTAGACACAATACAAGCAAAGTTGTCCGATAACACTCTTACTGTCACATTTGAGAAGAAAAATAAGTAA
Protein sequenceShow/hide protein sequence
MSSKILDEDFKKAVKSNYQLFPKDEWKDEENNKKSFTMSLPGFSKERLRINLNTKTRTIIVTGQKTNGLFNITRLNVPVTIKDDYLLDTIQAKLSDNTLTVTFEKKNK