; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0018884 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018884
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRHOMBOID-like protein 12
Genome locationchr12:826384..827955
RNA-Seq ExpressionPI0018884
SyntenyPI0018884
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019987.1 RHOMBOID-like protein 12, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-0445.83Show/hide
Query:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQI-------GS-------ELKLAFDHQWGG
        +S S  SH SF +KI+GFFS P   KRFI N SNT+F+ S+K +       GS       +LK  FDH+W G
Subjt:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQI-------GS-------ELKLAFDHQWGG

KGN64066.1 hypothetical protein Csa_013348 [Cucumis sativus]2.1e-7369.37Show/hide
Query:  MNKLFSLSRSLASSLSNSLST-----------FSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGSELKLAFDHQWGGSLQTKNNCYAGYYWK
        MN+LFSLSR LAS LSNS  T            SHPSFA+KIYGF SVPAA KRFIFNTSNT+FRKSL+QI SELKLAFDHQWGGSLQTKNNC   YYWK
Subjt:  MNKLFSLSRSLASSLSNSLST-----------FSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGSELKLAFDHQWGGSLQTKNNCYAGYYWK

Query:  WHEENVKLLTWSNQFSHFNFF-----WSRKCSHIASYILLPK-----------------------HRDSQFTMKNPERVLVGSLHGSFIFGMDMLRLLEN
        WHEE VKLLTW +QFSHFNFF     WSRKCSHIASYILLPK                       H+DSQFTMKNPERVL G + GSFI G+DMLRL EN
Subjt:  WHEENVKLLTWSNQFSHFNFF-----WSRKCSHIASYILLPK-----------------------HRDSQFTMKNPERVLVGSLHGSFIFGMDMLRLLEN

Query:  DNRISRSIHLWGIAFPASICAL
        DN+ISRSIHLWG AFPASI AL
Subjt:  DNRISRSIHLWGIAFPASICAL

XP_004137444.1 RHOMBOID-like protein 12, mitochondrial [Cucumis sativus]1.1e-0547.95Show/hide
Query:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGS---------------ELKLAFDHQWGG
        +S S  SH SFAQKI+GFFSVP   KRFI N SNT F+ S+K +                 +LK  F HQWGG
Subjt:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGS---------------ELKLAFDHQWGG

XP_022923619.1 RHOMBOID-like protein 12, mitochondrial [Cucurbita moschata]1.2e-0445.83Show/hide
Query:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQI-------GS-------ELKLAFDHQWGG
        +S S  SH SF +KI+GFFS P   KRFI N SNT+F+ S+K +       GS       +LK  FDH+W G
Subjt:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQI-------GS-------ELKLAFDHQWGG

XP_023519071.1 RHOMBOID-like protein 12, mitochondrial [Cucurbita pepo subsp. pepo]1.2e-0445.83Show/hide
Query:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQI-------GS-------ELKLAFDHQWGG
        +S S  SH SF +KI+GFFS P   KRFI N SNT+F+ S+K +       GS       +LK  FDH+W G
Subjt:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQI-------GS-------ELKLAFDHQWGG

TrEMBL top hitse value%identityAlignment
A0A0A0LTI7 Rhomboid domain-containing protein5.3e-0647.95Show/hide
Query:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGS---------------ELKLAFDHQWGG
        +S S  SH SFAQKI+GFFSVP   KRFI N SNT F+ S+K +                 +LK  F HQWGG
Subjt:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGS---------------ELKLAFDHQWGG

A0A0A0LVM8 Uncharacterized protein1.0e-7369.37Show/hide
Query:  MNKLFSLSRSLASSLSNSLST-----------FSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGSELKLAFDHQWGGSLQTKNNCYAGYYWK
        MN+LFSLSR LAS LSNS  T            SHPSFA+KIYGF SVPAA KRFIFNTSNT+FRKSL+QI SELKLAFDHQWGGSLQTKNNC   YYWK
Subjt:  MNKLFSLSRSLASSLSNSLST-----------FSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGSELKLAFDHQWGGSLQTKNNCYAGYYWK

Query:  WHEENVKLLTWSNQFSHFNFF-----WSRKCSHIASYILLPK-----------------------HRDSQFTMKNPERVLVGSLHGSFIFGMDMLRLLEN
        WHEE VKLLTW +QFSHFNFF     WSRKCSHIASYILLPK                       H+DSQFTMKNPERVL G + GSFI G+DMLRL EN
Subjt:  WHEENVKLLTWSNQFSHFNFF-----WSRKCSHIASYILLPK-----------------------HRDSQFTMKNPERVLVGSLHGSFIFGMDMLRLLEN

Query:  DNRISRSIHLWGIAFPASICAL
        DN+ISRSIHLWG AFPASI AL
Subjt:  DNRISRSIHLWGIAFPASICAL

A0A1S3BSX2 RHOMBOID-like protein 12, mitochondrial2.9e-0443.84Show/hide
Query:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGS---------------ELKLAFDHQWGG
        +S S  SH SF QKI+GFFSVP   KR + N SNT F+ S+K +                 +LK  F HQWGG
Subjt:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGS---------------ELKLAFDHQWGG

A0A5D3BLA0 RHOMBOID-like protein 122.9e-0443.84Show/hide
Query:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGS---------------ELKLAFDHQWGG
        +S S  SH SF QKI+GFFSVP   KR + N SNT F+ S+K +                 +LK  F HQWGG
Subjt:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGS---------------ELKLAFDHQWGG

A0A6J1E6X7 RHOMBOID-like protein 12, mitochondrial5.8e-0545.83Show/hide
Query:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQI-------GS-------ELKLAFDHQWGG
        +S S  SH SF +KI+GFFS P   KRFI N SNT+F+ S+K +       GS       +LK  FDH+W G
Subjt:  NSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQI-------GS-------ELKLAFDHQWGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGCTCTTCTCTCTTTCTCGCAGCCTTGCATCAAGTCTTTCGAATTCACTCTCTACGTTTTCTCATCCAAGTTTTGCCCAGAAAATTTATGGATTTTTCTCAGT
TCCGGCGGCCGAAAAGCGATTCATCTTCAATACTTCAAATACCATTTTCCGGAAGAGTCTAAAACAAATTGGGTCTGAGTTGAAACTAGCTTTTGATCATCAATGGGGAG
GCAGTTTGCAAACGAAGAACAATTGTTATGCTGGTTACTACTGGAAATGGCATGAGGAAAATGTGAAACTTCTAACTTGGTCAAATCAGTTCAGCCACTTCAATTTCTTT
TGGAGCCGTAAATGCTCTCATATTGCTTCATATATTCTTCTTCCCAAACACAGAGATTCACAGTTCACTATGAAAAATCCTGAAAGAGTCCTTGTTGGTTCATTGCACGG
CAGTTTTATCTTTGGAATGGACATGTTGAGGCTACTAGAGAATGACAACCGAATTTCAAGATCTATCCACCTGTGGGGTATTGCATTTCCAGCCTCAATCTGTGCCCTTT
TCATTACATGCATGATTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGCTCTTCTCTCTTTCTCGCAGCCTTGCATCAAGTCTTTCGAATTCACTCTCTACGTTTTCTCATCCAAGTTTTGCCCAGAAAATTTATGGATTTTTCTCAGT
TCCGGCGGCCGAAAAGCGATTCATCTTCAATACTTCAAATACCATTTTCCGGAAGAGTCTAAAACAAATTGGGTCTGAGTTGAAACTAGCTTTTGATCATCAATGGGGAG
GCAGTTTGCAAACGAAGAACAATTGTTATGCTGGTTACTACTGGAAATGGCATGAGGAAAATGTGAAACTTCTAACTTGGTCAAATCAGTTCAGCCACTTCAATTTCTTT
TGGAGCCGTAAATGCTCTCATATTGCTTCATATATTCTTCTTCCCAAACACAGAGATTCACAGTTCACTATGAAAAATCCTGAAAGAGTCCTTGTTGGTTCATTGCACGG
CAGTTTTATCTTTGGAATGGACATGTTGAGGCTACTAGAGAATGACAACCGAATTTCAAGATCTATCCACCTGTGGGGTATTGCATTTCCAGCCTCAATCTGTGCCCTTT
TCATTACATGCATGATTTGTTGA
Protein sequenceShow/hide protein sequence
MNKLFSLSRSLASSLSNSLSTFSHPSFAQKIYGFFSVPAAEKRFIFNTSNTIFRKSLKQIGSELKLAFDHQWGGSLQTKNNCYAGYYWKWHEENVKLLTWSNQFSHFNFF
WSRKCSHIASYILLPKHRDSQFTMKNPERVLVGSLHGSFIFGMDMLRLLENDNRISRSIHLWGIAFPASICALFITCMIC