; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0018924 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018924
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr05:6299054..6299425
RNA-Seq ExpressionPI0018924
SyntenyPI0018924
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.9e-2550.42Show/hide
Query:  SNPHNRTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLH
        S PH   E NVEE + +R +QR+   +       +KK+ IERLKALGAT F GTT+PVDAE+WLTL+EKCF+V  C E++KV+LA FLLQ   EDWW + 
Subjt:  SNPHNRTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLH

Query:  VAKAGGMSFVSWREFRKTF
         ++      + W EF+K F
Subjt:  VAKAGGMSFVSWREFRKTF

KAA0035024.1 hypothetical protein E6C27_scaffold57G00740 [Cucumis melo var. makuwa]4.5e-2963.06Show/hide
Query:  SNPHNRTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLH
        SNPH+   +N EESMF RFSQR+  H   T   V+K+F IERLKALGAT FEGTT+P + EKWL+L+EK F VM+C  E+ VKLAT LLQGSVEDWWT H
Subjt:  SNPHNRTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLH

Query:  VAKAGGMSFVS
         A+  GM  VS
Subjt:  VAKAGGMSFVS

KAA0047616.1 uncharacterized protein E6C27_scaffold115G00890 [Cucumis melo var. makuwa]5.2e-2551.79Show/hide
Query:  EKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAGGM
        E NVEE + +R +Q + + + S    ++K F IERLKALGAT F GTT+  DAE WLTL+EKCF+VM CLE++KV+L  FLL+   EDWW L  ++    
Subjt:  EKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAGGM

Query:  SFVSWREFRKTF
          +SW EF+KTF
Subjt:  SFVSWREFRKTF

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]2.3e-2550.88Show/hide
Query:  RTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAG
        R E+NVEE + +R +QR+ + + S     +KK+  ERLKALGAT F GTT+P D E WLTL+EKCFRV   LE++KV+LA FLLQ   EDWW +  ++  
Subjt:  RTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAG

Query:  GMSFVSWREFRKTF
            +SW EF+K F
Subjt:  GMSFVSWREFRKTF

XP_038896366.1 uncharacterized protein LOC120084630 [Benincasa hispida]8.9e-2552.68Show/hide
Query:  EKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAGGM
        EK+ EE   N+F+QR+   L +  P + KK+ IERLKALGATNFEGT DP +AE W+  +EK F VM C + +KV LATFLLQ   EDWW L   + G  
Subjt:  EKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAGGM

Query:  SFVSWREFRKTF
          + W EFRK F
Subjt:  SFVSWREFRKTF

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein4.3e-2550.42Show/hide
Query:  SNPHNRTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLH
        S PH   E NVEE + +R +QR+   +       +KK+ IERLKALGAT F GTT+PVDAE+WLTL+EKCF+V  C E++KV+LA FLLQ   EDWW + 
Subjt:  SNPHNRTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLH

Query:  VAKAGGMSFVSWREFRKTF
         ++      + W EF+K F
Subjt:  VAKAGGMSFVSWREFRKTF

A0A5A7U067 Retrotrans_gag domain-containing protein2.5e-2551.79Show/hide
Query:  EKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAGGM
        E NVEE + +R +Q + + + S    ++K F IERLKALGAT F GTT+  DAE WLTL+EKCF+VM CLE++KV+L  FLL+   EDWW L  ++    
Subjt:  EKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAGGM

Query:  SFVSWREFRKTF
          +SW EF+KTF
Subjt:  SFVSWREFRKTF

A0A5D3BB91 Reverse transcriptase1.1e-2550.88Show/hide
Query:  RTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAG
        R E+NVEE + +R +QR+ + + S     +KK+  ERLKALGAT F GTT+P D E WLTL+EKCFRV   LE++KV+LA FLLQ   EDWW +  ++  
Subjt:  RTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAG

Query:  GMSFVSWREFRKTF
            +SW EF+K F
Subjt:  GMSFVSWREFRKTF

A0A5D3BTQ7 Uncharacterized protein2.2e-2963.06Show/hide
Query:  SNPHNRTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLH
        SNPH+   +N EESMF RFSQR+  H   T   V+K+F IERLKALGAT FEGTT+P + EKWL+L+EK F VM+C  E+ VKLAT LLQGSVEDWWT H
Subjt:  SNPHNRTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLH

Query:  VAKAGGMSFVS
         A+  GM  VS
Subjt:  VAKAGGMSFVS

A0A5D3BWX9 Retrotrans_gag domain-containing protein1.4e-2358.89Show/hide
Query:  MSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAGGMSFVSWREFRK
        MS+NP       I+RLKALG  +FEG T+P D ++WL+L+  CF V+EC EEKKVKLATFLLQ   +DWWT HVA+ GG  +V W EFRK
Subjt:  MSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAGGMSFVSWREFRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATGTCTGAGTAATCCTCATAACAGAACTGAGAAAAACGTGGAAGAAAGTATGTTCAACCGTTTTTCCCAAAGAGTTGCAAATCACCTTATGTCTACAAACCCTAC
AGTAGATAAGAAGTTTATCATTGAAAGGTTGAAGGCATTGGGAGCAACAAATTTCGAAGGGACCACTGATCCAGTCGATGCGGAGAAATGGTTGACCTTGGTTGAGAAGT
GTTTTAGGGTGATGGAGTGCCTCGAAGAAAAGAAAGTGAAATTAGCAACATTTTTATTGCAAGGAAGCGTCGAAGATTGGTGGACTCTCCACGTGGCAAAAGCGGGCGGA
ATGAGCTTTGTTTCTTGGAGAGAGTTTCGAAAGACGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATGTCTGAGTAATCCTCATAACAGAACTGAGAAAAACGTGGAAGAAAGTATGTTCAACCGTTTTTCCCAAAGAGTTGCAAATCACCTTATGTCTACAAACCCTAC
AGTAGATAAGAAGTTTATCATTGAAAGGTTGAAGGCATTGGGAGCAACAAATTTCGAAGGGACCACTGATCCAGTCGATGCGGAGAAATGGTTGACCTTGGTTGAGAAGT
GTTTTAGGGTGATGGAGTGCCTCGAAGAAAAGAAAGTGAAATTAGCAACATTTTTATTGCAAGGAAGCGTCGAAGATTGGTGGACTCTCCACGTGGCAAAAGCGGGCGGA
ATGAGCTTTGTTTCTTGGAGAGAGTTTCGAAAGACGTTTTAG
Protein sequenceShow/hide protein sequence
MKCLSNPHNRTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAGG
MSFVSWREFRKTF