; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0018937 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018937
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:11086974..11091273
RNA-Seq ExpressionPI0018937
SyntenyPI0018937
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.4e-5569.28Show/hide
Query:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE
        QFD+DVT EYI+WY NI++LYIT+  A + HL         RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVP PVQRRR  VQ+PD+LEE
Subjt:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE

Query:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY
        V+QH +EVPPM QTQS    VSP+MMMP FGT YYDS VGQSSDFG  YYN +AG SS++FGQ YY
Subjt:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.9e-5670.48Show/hide
Query:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE
        QFD+DVT EYINWY NI++LYIT+  A + HL         RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVP PVQRRR  VQ+PD+LEE
Subjt:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE

Query:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY
        V+QH +EVPPM QTQS    VSP+MMMP FGT YYDS VGQSSDFG  YYN EAG SS++FGQ YY
Subjt:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.4e-5569.28Show/hide
Query:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE
        QFD+DVT EYI+WY NI++LYIT+  A + HL         RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVP PVQRRR  VQ+PD+LEE
Subjt:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE

Query:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY
        V+QH +EVPPM QTQS    VSP+MMMP FGT YYDS VGQSSDFG  YYN +AG SS++FGQ YY
Subjt:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-3171.43Show/hide
Query:  MVHLYVTVSRIDLGIDLNVESRPVEEYVDVDPESDAQPVCSEEEMVANNEYRDFRKETDDEFEEMEFDGREHEFLSNTFTELDMNAVDNVHEHDPIIVLV
        MVHLYVTVS +D  I+LNVE R VEEYVDV+PESDA PVC EEEMVA NEY +FR ETDDEFEEM+FDG E+E  SNTFT+LDMNAVD + EHDPIIV +
Subjt:  MVHLYVTVSRIDLGIDLNVESRPVEEYVDVDPESDAQPVCSEEEMVANNEYRDFRKETDDEFEEMEFDGREHEFLSNTFTELDMNAVDNVHEHDPIIVLV

Query:  WLHN--FYTSMI
           N   YT MI
Subjt:  WLHN--FYTSMI

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.3e-5470.48Show/hide
Query:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE
        QFD+DVT EYI+WY NITRLYIT+  A VGHL         RSNNSRLR+VA++PQQ+L+ICN+NE+YMENIHYMYDVPI   PVQRR A VQKPD+LEE
Subjt:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE

Query:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY
        V+QHV+E+P M QTQS    VSP+MMM  FGT YYD  VGQSSDFGT YYN EA PSSSNFGQ YY
Subjt:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY

TYK01570.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.2e-9160Show/hide
Query:  MVHLYVTVSRIDLGIDLNVESRPVEEYVDVDPESDAQPVCSEEEMVANNEYRDFRKETDDEFEEMEFDGREHEFLSNTFTELDMNAVDNVHEHDPIIVLV
        MVHLYVTVS +D  I+LNVE R VEEYVDV+PESDA PVC EEEMVA NEY +FR ETDDEFEEM+FDG E+E  SNTFT+LDMNAVD + EHDPIIV +
Subjt:  MVHLYVTVSRIDLGIDLNVESRPVEEYVDVDPESDAQPVCSEEEMVANNEYRDFRKETDDEFEEMEFDGREHEFLSNTFTELDMNAVDNVHEHDPIIVLV

Query:  WLHNFYTSMIINYTDELMVRVSQY--RYMFDLLQPDQSCSFGDAMTKSQKIYCYETFFGQFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQ
           N  T +  +++D +   V ++  R  F    P                        QFD+DVT EY +WY NI++LYIT+L A + HL         
Subjt:  WLHNFYTSMIINYTDELMVRVSQY--RYMFDLLQPDQSCSFGDAMTKSQKIYCYETFFGQFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQ

Query:  RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEEVEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQ
        RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVP PVQRRR  VQ+PD+LEEV+QH +EVPPM +TQS    VSP+MMMP F T YYDS VGQ
Subjt:  RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEEVEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQ

Query:  SSDFGTRYYNLEAGPSSSNFGQGYY
        S DFG  YYN EAG SS++FGQ YY
Subjt:  SSDFGTRYYNLEAGPSSSNFGQGYY

TrEMBL top hitse value%identityAlignment
A0A5A7U558 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.1e-5570.48Show/hide
Query:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE
        QFD+DVT EYI+WY NITRLYIT+  A VGHL         RSNNSRLR+VA++PQQ+L+ICN+NE+YMENIHYMYDVPI   PVQRR A VQKPD+LEE
Subjt:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE

Query:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY
        V+QHV+E+P M QTQS    VSP+MMM  FGT YYD  VGQSSDFGT YYN EA PSSSNFGQ YY
Subjt:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-5670.48Show/hide
Query:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE
        QFD+DVT EYINWY NI++LYIT+  A + HL         RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVP PVQRRR  VQ+PD+LEE
Subjt:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE

Query:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY
        V+QH +EVPPM QTQS    VSP+MMMP FGT YYDS VGQSSDFG  YYN EAG SS++FGQ YY
Subjt:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein3.6e-5569.28Show/hide
Query:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE
        QFD+DVT EYI+WY NI++LYIT+  A + HL         RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVP PVQRRR  VQ+PD+LEE
Subjt:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE

Query:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY
        V+QH +EVPPM QTQS    VSP+MMMP FGT YYDS VGQSSDFG  YYN +AG SS++FGQ YY
Subjt:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein7.3e-3271.43Show/hide
Query:  MVHLYVTVSRIDLGIDLNVESRPVEEYVDVDPESDAQPVCSEEEMVANNEYRDFRKETDDEFEEMEFDGREHEFLSNTFTELDMNAVDNVHEHDPIIVLV
        MVHLYVTVS +D  I+LNVE R VEEYVDV+PESDA PVC EEEMVA NEY +FR ETDDEFEEM+FDG E+E  SNTFT+LDMNAVD + EHDPIIV +
Subjt:  MVHLYVTVSRIDLGIDLNVESRPVEEYVDVDPESDAQPVCSEEEMVANNEYRDFRKETDDEFEEMEFDGREHEFLSNTFTELDMNAVDNVHEHDPIIVLV

Query:  WLHN--FYTSMI
           N   YT MI
Subjt:  WLHN--FYTSMI

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein3.6e-5569.28Show/hide
Query:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE
        QFD+DVT EYI+WY NI++LYIT+  A + HL         RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVP PVQRRR  VQ+PD+LEE
Subjt:  QFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEE

Query:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY
        V+QH +EVPPM QTQS    VSP+MMMP FGT YYDS VGQSSDFG  YYN +AG SS++FGQ YY
Subjt:  VEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYY

A0A5D3BR52 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-9160Show/hide
Query:  MVHLYVTVSRIDLGIDLNVESRPVEEYVDVDPESDAQPVCSEEEMVANNEYRDFRKETDDEFEEMEFDGREHEFLSNTFTELDMNAVDNVHEHDPIIVLV
        MVHLYVTVS +D  I+LNVE R VEEYVDV+PESDA PVC EEEMVA NEY +FR ETDDEFEEM+FDG E+E  SNTFT+LDMNAVD + EHDPIIV +
Subjt:  MVHLYVTVSRIDLGIDLNVESRPVEEYVDVDPESDAQPVCSEEEMVANNEYRDFRKETDDEFEEMEFDGREHEFLSNTFTELDMNAVDNVHEHDPIIVLV

Query:  WLHNFYTSMIINYTDELMVRVSQY--RYMFDLLQPDQSCSFGDAMTKSQKIYCYETFFGQFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQ
           N  T +  +++D +   V ++  R  F    P                        QFD+DVT EY +WY NI++LYIT+L A + HL         
Subjt:  WLHNFYTSMIINYTDELMVRVSQY--RYMFDLLQPDQSCSFGDAMTKSQKIYCYETFFGQFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQ

Query:  RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEEVEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQ
        RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVP PVQRRR  VQ+PD+LEEV+QH +EVPPM +TQS    VSP+MMMP F T YYDS VGQ
Subjt:  RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEEVEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQ

Query:  SSDFGTRYYNLEAGPSSSNFGQGYY
        S DFG  YYN EAG SS++FGQ YY
Subjt:  SSDFGTRYYNLEAGPSSSNFGQGYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCATTTGTACGTGACTGTGAGTAGGATAGATTTGGGCATCGACTTAAATGTAGAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCGGAGTCAGATGCACA
ACCAGTGTGCAGTGAAGAAGAAATGGTAGCTAATAATGAGTATAGAGACTTTAGAAAAGAAACTGATGATGAATTCGAAGAGATGGAATTTGATGGGCGTGAACATGAAT
TTCTCTCAAATACATTCACTGAGTTGGACATGAATGCAGTAGATAACGTTCATGAGCACGATCCAATTATAGTCCTAGTGTGGCTCCACAACTTCTACACCTCAATGATC
ATCAATTACACGGACGAGCTTATGGTTCGAGTCTCTCAGTATAGGTACATGTTTGATCTTCTTCAACCTGATCAGAGTTGCTCATTTGGTGATGCGATGACTAAATCGCA
GAAGATTTATTGCTACGAGACTTTCTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACATAAATATTACCAGACTCTATATCACTCGATTGAGAG
CTCCTGTAGGTCATCTGTTTCTAATTAATTTTAATATTTCACAAAGGTCGAATAATAGTAGACTTCGGGATGTTGCAGATGATCCACAACAAGTCCTAGATATATGCAAC
AATAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTATACCAGTTCAAAGGAGACGTGCTCGAGTGCAAAAGCCTGATGAATTGGAAGA
AGTTGAACAACACGTGCAAGAAGTGCCTCCTATGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGCCGATATTTGGAACGAGATATTATGATT
CAAGAGTCGGTCAATCGTCAGACTTCGGGACAAGATATTATAATTTAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATACTACATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGCATTTGTACGTGACTGTGAGTAGGATAGATTTGGGCATCGACTTAAATGTAGAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCGGAGTCAGATGCACA
ACCAGTGTGCAGTGAAGAAGAAATGGTAGCTAATAATGAGTATAGAGACTTTAGAAAAGAAACTGATGATGAATTCGAAGAGATGGAATTTGATGGGCGTGAACATGAAT
TTCTCTCAAATACATTCACTGAGTTGGACATGAATGCAGTAGATAACGTTCATGAGCACGATCCAATTATAGTCCTAGTGTGGCTCCACAACTTCTACACCTCAATGATC
ATCAATTACACGGACGAGCTTATGGTTCGAGTCTCTCAGTATAGGTACATGTTTGATCTTCTTCAACCTGATCAGAGTTGCTCATTTGGTGATGCGATGACTAAATCGCA
GAAGATTTATTGCTACGAGACTTTCTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACATAAATATTACCAGACTCTATATCACTCGATTGAGAG
CTCCTGTAGGTCATCTGTTTCTAATTAATTTTAATATTTCACAAAGGTCGAATAATAGTAGACTTCGGGATGTTGCAGATGATCCACAACAAGTCCTAGATATATGCAAC
AATAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTATACCAGTTCAAAGGAGACGTGCTCGAGTGCAAAAGCCTGATGAATTGGAAGA
AGTTGAACAACACGTGCAAGAAGTGCCTCCTATGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGCCGATATTTGGAACGAGATATTATGATT
CAAGAGTCGGTCAATCGTCAGACTTCGGGACAAGATATTATAATTTAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATACTACATTTAG
Protein sequenceShow/hide protein sequence
MVHLYVTVSRIDLGIDLNVESRPVEEYVDVDPESDAQPVCSEEEMVANNEYRDFRKETDDEFEEMEFDGREHEFLSNTFTELDMNAVDNVHEHDPIIVLVWLHNFYTSMI
INYTDELMVRVSQYRYMFDLLQPDQSCSFGDAMTKSQKIYCYETFFGQFDVDVTPEYINWYINITRLYITRLRAPVGHLFLINFNISQRSNNSRLRDVADDPQQVLDICN
NNERYMENIHYMYDVPIVPIPVQRRRARVQKPDELEEVEQHVQEVPPMRQTQSGTGDVSPMMMMPIFGTRYYDSRVGQSSDFGTRYYNLEAGPSSSNFGQGYYI