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PI0018961 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018961
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:12360050..12360214
RNA-Seq ExpressionPI0018961
SyntenyPI0018961
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.0e-1472.22Show/hide
Query:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
        MTN +I D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF+DWELRNQ
Subjt:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
KAA0060101.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.8e-1474.07Show/hide
Query:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
        MTN NI D++DE DST+ATT G++IHYIETSN W+ WRDEL E MFSDWELRNQ
Subjt:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-1474.07Show/hide
Query:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
        MTN +I D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MFSDWELRNQ
Subjt:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.1e-1474.07Show/hide
Query:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
        MTN +I D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MFSDWELRNQ
Subjt:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
XP_008442271.1 PREDICTED: uncharacterized protein LOC103486178 [Cucumis melo]1.8e-1474.07Show/hide
Query:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
        MTN NI D++DE DST+ATT G++IHYIETSN W+ WRDEL E MFSDWELRNQ
Subjt:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A1S3B5B3 uncharacterized protein LOC1034861788.8e-1574.07Show/hide
Query:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
        MTN NI D++DE DST+ATT G++IHYIETSN W+ WRDEL E MFSDWELRNQ
Subjt:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
A0A5A7UIM7 Putative nuclease HARBI12.0e-1472.22Show/hide
Query:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
        MTN +I D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF+DWELRNQ
Subjt:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
A0A5A7VJX3 Retrotransposon protein1.5e-1474.07Show/hide
Query:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
        MTN +I D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MFSDWELRNQ
Subjt:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
A0A5D3BL48 Putative nuclease HARBI11.5e-1474.07Show/hide
Query:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
        MTN +I D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MFSDWELRNQ
Subjt:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
A0A5D3CA52 Putative nuclease HARBI18.8e-1574.07Show/hide
Query:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
        MTN NI D++DE DST+ATT G++IHYIETSN W+ WRDEL E MFSDWELRNQ
Subjt:  MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACACTAACATACCGGACGAAGTTGATGAGGGTGACTCCACGTACGCCACCACTGGCGGTGAGGAAATTCACTACATAGAGACGTCCAATGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACACTAACATACCGGACGAAGTTGATGAGGGTGACTCCACGTACGCCACCACTGGCGGTGAGGAAATTCACTACATAGAGACGTCCAATGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNTNIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFSDWELRNQ