; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019004 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019004
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein LOW PSII ACCUMULATION 3, chloroplastic
Genome locationchr06:30081179..30086909
RNA-Seq ExpressionPI0019004
SyntenyPI0019004
Gene Ontology termsNA
InterPro domainsIPR018962 - Domain of unknown function DUF1995
IPR044687 - Protein LOW PSII ACCUMULATION 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650015.1 hypothetical protein Csa_009730 [Cucumis sativus]2.0e-17796.01Show/hide
Query:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHF N+NFASS TI+TA+LPLPSPKLACFRISHR+THR  VSSSMFEFMPRR+LRVL PNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAAL DNK
Subjt:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NKFVCVHQQEEMPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

XP_008448608.1 PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Cucumis melo]5.5e-17592.88Show/hide
Query:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHF N+NFASS TISTA+LPL SP+LACFRISHRKTHR FVSSSMFEFMPRRNLRVL P+LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
Subjt:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV           FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE

Query:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCY
        KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR Y
Subjt:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCY

Query:  PGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS
        PGPWKVLRKVRNK  CVHQQEEMPSLKEVALNILPSS
Subjt:  PGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS

XP_008448609.1 PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Cucumis melo]1.6e-17796.01Show/hide
Query:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHF N+NFASS TISTA+LPL SP+LACFRISHRKTHR FVSSSMFEFMPRRNLRVL P+LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
Subjt:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NK  CVHQQEEMPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

XP_031738157.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus]5.5e-17593.15Show/hide
Query:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHF N+NFASS TI+TA+LPLPSPKLACFRISHR+THR  VSSSMFEFMPRR+LRVL PNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAAL DNK
Subjt:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEK
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV          FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEK
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEK

Query:  VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYP
        VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFR YP
Subjt:  VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYP

Query:  GPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS
        GPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS
Subjt:  GPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS

XP_038877167.1 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Benincasa hispida]5.2e-17394.48Show/hide
Query:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHF N+NFASS  I TAILPLPSP LACFRISHRKTHR F+ SS+FEF  RRNLRV   N SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
Subjt:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGG EMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NKFVCVHQQE+MPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

TrEMBL top hitse value%identityAlignment
A0A0A0L151 DUF1995 domain-containing protein9.8e-17896.01Show/hide
Query:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHF N+NFASS TI+TA+LPLPSPKLACFRISHR+THR  VSSSMFEFMPRR+LRVL PNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAAL DNK
Subjt:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NKFVCVHQQEEMPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

A0A1S3BK29 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X12.7e-17592.88Show/hide
Query:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHF N+NFASS TISTA+LPL SP+LACFRISHRKTHR FVSSSMFEFMPRRNLRVL P+LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
Subjt:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV           FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE

Query:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCY
        KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR Y
Subjt:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCY

Query:  PGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS
        PGPWKVLRKVRNK  CVHQQEEMPSLKEVALNILPSS
Subjt:  PGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS

A0A1S3BKQ4 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X27.5e-17896.01Show/hide
Query:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHF N+NFASS TISTA+LPL SP+LACFRISHRKTHR FVSSSMFEFMPRRNLRVL P+LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
Subjt:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NK  CVHQQEEMPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

A0A6J1E988 protein LOW PSII ACCUMULATION 3, chloroplastic4.7e-16489.26Show/hide
Query:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        M+F N+NF SS TI  A+LPLPS   ACFR+SHRK HR  +SSS+ EFM  RNLRV L N SNR+SS+ STD DVPFPRDY DLL+QAKKATEAALRDNK
Subjt:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEG SFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAV NT RKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NKFVCVHQQ++MPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

A0A6J1HNL5 protein LOW PSII ACCUMULATION 3, chloroplastic1.2e-16288.65Show/hide
Query:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        M+F N+ F SS TI  A+LPLPS   ACFR+ HRK HR  +SSS+ EFM  RNLRV L N SNR+SS+ STD DVPFPRDY DLL+QAKKATEAALRDNK
Subjt:  MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEG SFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NK VCVHQQ++MPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

SwissProt top hitse value%identityAlignment
Q8H0W0 Protein LPA33.5e-0725Show/hide
Query:  SSNASTDLDVPF--PRDYSDLLNQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVK
        SSN+     VP   P+ Y  L   A  +   AL+D+K  +EI+FP   + + S  G  +  I+  +  ++ ++R+     +     TR  + FP+  E +
Subjt:  SSNASTDLDVPF--PRDYSDLLNQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVK

Query:  FARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDR
         A         + +G+S   LD +   S   FF       DF F ++ +     +P++   L  +   +  E+  +E+  +    +T    ++FN ELD 
Subjt:  FARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDR

Query:  IRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQK-----------GGVLFRCYPGPWKV-LRKVRNKFVCVHQQEEMPSLKEVALNIL
        +R+      F PK   L      +   V+YI   +  K            G LFR YPGPW+V L++    F CV +     +L E    +L
Subjt:  IRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQK-----------GGVLFRCYPGPWKV-LRKVRNKFVCVHQQEEMPSLKEVALNIL

Arabidopsis top hitse value%identityAlignment
AT1G73060.1 Low PSII Accumulation 32.5e-0825Show/hide
Query:  SSNASTDLDVPF--PRDYSDLLNQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVK
        SSN+     VP   P+ Y  L   A  +   AL+D+K  +EI+FP   + + S  G  +  I+  +  ++ ++R+     +     TR  + FP+  E +
Subjt:  SSNASTDLDVPF--PRDYSDLLNQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVK

Query:  FARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDR
         A         + +G+S   LD +   S   FF       DF F ++ +     +P++   L  +   +  E+  +E+  +    +T    ++FN ELD 
Subjt:  FARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDR

Query:  IRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQK-----------GGVLFRCYPGPWKV-LRKVRNKFVCVHQQEEMPSLKEVALNIL
        +R+      F PK   L      +   V+YI   +  K            G LFR YPGPW+V L++    F CV +     +L E    +L
Subjt:  IRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQK-----------GGVLFRCYPGPWKV-LRKVRNKFVCVHQQEEMPSLKEVALNIL

AT5G27560.1 Domain of unknown function (DUF1995)6.2e-0723.75Show/hide
Query:  FFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRD--NK
        FF+ + +  F+ ST        K   F+          VSSS        ++   LP    +       D D   P D    + Q+ +A  A +    N+
Subjt:  FFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRD--NK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADR--VK
         ++E+  P   L+ +  +G       E   L R F +  I      R +  FP+A            G +  L Y  K +    FGF     ++DR  V+
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADR--VK

Query:  PEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGEL--DRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKV
         EDE+ ++  P + + E   VE++      +  R LI++N  L  + +  G+        +  L +       TVY   + +    G +FRCYPG WKV
Subjt:  PEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGEL--DRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKV

AT5G48790.1 Domain of unknown function (DUF1995)4.0e-12370.35Show/hide
Query:  SFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEF-MPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPT
        SF+I+T + P     LA    S+ K   C + S   +     RNL+    ++S   ++N S D +VPFPRDY +L+NQAK+A E AL+D KQLMEIEFPT
Subjt:  SFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEF-MPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPT

Query:  AGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYP
        +GL SVPGDGEG  EMTES+ +IR+FCD  + P KA  TR+FFPEANEVKFA+ T F G  FKLDYLTKPS FEDFGF E+VKMADRVKPEDELFLVAYP
Subjt:  AGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYP

Query:  YFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVRNKFVCVHQQ
        YFNVNEMLVVEELYKEAV NT RKLIIFNGELDRIRSGYYP FFYPKLAAL KTL PKMETVYYIHNFKGQKGGVLFRCYPGPW+VLR+ RNK++CVHQQ
Subjt:  YFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVRNKFVCVHQQ

Query:  EEMPSLKEVALNILPSS
        E MPSLKEVAL+IL S+
Subjt:  EEMPSLKEVALNILPSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTCTTCAACTCCAATTTTGCTTCTTCCTTTACCATTTCCACTGCGATTCTTCCACTTCCTTCTCCAAAGCTTGCTTGTTTCAGGATTTCGCACCGGAAAACTCA
TCGGTGTTTCGTTTCCAGTTCAATGTTTGAGTTTATGCCGCGTAGAAATCTTAGAGTTTTGCTGCCGAATTTGAGTAATCGTCAGAGTAGCAATGCATCGACTGATTTAG
ACGTTCCGTTTCCTCGCGATTATTCTGATCTTCTCAATCAGGCGAAAAAAGCAACTGAAGCCGCTTTAAGAGACAACAAACAGTTGATGGAGATTGAATTTCCAACTGCT
GGTCTTGAATCAGTTCCAGGTGATGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAATTGATTCGCCAATTTTGTGATTGCTTCATAGATCCACTGAAAGCAACTCG
GACCAGAGTATTCTTTCCAGAGGCCAACGAAGTTAAATTTGCAAGAAACACAGCATTTGAAGGAGTTTCATTCAAGTTGGACTACCTCACGAAACCATCATTTTTTGAGG
ATTTTGGTTTTGTTGAGAAAGTGAAAATGGCCGACCGTGTGAAACCAGAAGATGAGCTTTTTCTGGTTGCATATCCATATTTCAATGTCAATGAAATGCTTGTGGTTGAA
GAGCTCTACAAGGAAGCTGTCCAAAACACTACACGAAAACTCATAATATTTAACGGAGAGCTCGACCGCATTAGATCCGGCTACTATCCGCCATTTTTCTATCCAAAGCT
GGCGGCTCTCATGAAGACTCTCTTCCCCAAGATGGAGACTGTATATTACATTCATAACTTCAAGGGCCAGAAAGGAGGAGTTCTTTTCAGGTGCTACCCAGGTCCTTGGA
AAGTGCTTAGAAAAGTGAGAAACAAATTCGTCTGCGTACATCAGCAAGAAGAAATGCCTTCTCTCAAGGAAGTTGCTTTAAACATTCTTCCATCGTCTTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTCTCTCTCTCTCTCTTGCTTTCAATTTTCACTTCGAAGTTCAGCAAAAATGCATTTCTTCAACTCCAATTTTGCTTCTTCCTTTACCATTTCCACTGCGATT
CTTCCACTTCCTTCTCCAAAGCTTGCTTGTTTCAGGATTTCGCACCGGAAAACTCATCGGTGTTTCGTTTCCAGTTCAATGTTTGAGTTTATGCCGCGTAGAAATCTTAG
AGTTTTGCTGCCGAATTTGAGTAATCGTCAGAGTAGCAATGCATCGACTGATTTAGACGTTCCGTTTCCTCGCGATTATTCTGATCTTCTCAATCAGGCGAAAAAAGCAA
CTGAAGCCGCTTTAAGAGACAACAAACAGTTGATGGAGATTGAATTTCCAACTGCTGGTCTTGAATCAGTTCCAGGTGATGGCGAAGGAGGAATTGAAATGACTGAGAGT
ATGCAATTGATTCGCCAATTTTGTGATTGCTTCATAGATCCACTGAAAGCAACTCGGACCAGAGTATTCTTTCCAGAGGCCAACGAAGTTAAATTTGCAAGAAACACAGC
ATTTGAAGGAGTTTCATTCAAGTTGGACTACCTCACGAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCCGACCGTGTGAAACCAGAAGATG
AGCTTTTTCTGGTTGCATATCCATATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTCTACAAGGAAGCTGTCCAAAACACTACACGAAAACTCATAATATTTAAC
GGAGAGCTCGACCGCATTAGATCCGGCTACTATCCGCCATTTTTCTATCCAAAGCTGGCGGCTCTCATGAAGACTCTCTTCCCCAAGATGGAGACTGTATATTACATTCA
TAACTTCAAGGGCCAGAAAGGAGGAGTTCTTTTCAGGTGCTACCCAGGTCCTTGGAAAGTGCTTAGAAAAGTGAGAAACAAATTCGTCTGCGTACATCAGCAAGAAGAAA
TGCCTTCTCTCAAGGAAGTTGCTTTAAACATTCTTCCATCGTCTTGAGGGTCAATTATATTAGTCAATATCACCGTTCATTGTCATGTGAAGAGGATGCTTTGTTCCTTC
ACATCAAAGTCTCTTCTCTGGTAAATGCTACATCAATATAATCTGTATATTCTTACTAAATATTTGACGTCCATAAAATTGATGAAATGTCTAAAAACTGACATATTTAG
AAACCCCTTTCTTCACTTTACTTCAAGACCAAATTCAACTCATTTCGACGTGTTTTCCACTA
Protein sequenceShow/hide protein sequence
MHFFNSNFASSFTISTAILPLPSPKLACFRISHRKTHRCFVSSSMFEFMPRRNLRVLLPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTA
GLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVE
ELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS