; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019013 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019013
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic
Genome locationchr01:24996567..24998506
RNA-Seq ExpressionPI0019013
SyntenyPI0019013
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003425 - CCB3/YggT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136016.2 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X1 [Cucumis sativus]1.3e-8684.83Show/hide
Query:  MAATAACSSLSSIR-------------------RGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAA
        MAAT ACSSLSSIR                   RGF YHPQRNPN KFQAIKC SSLLGSFTSSK  LSLAYVIPPLKPAAAYEAARTIPF LQDAS+AA
Subjt:  MAATAACSSLSSIR-------------------RGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAA

Query:  SDFVNNMTLADLDPGTAKLAISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQ
        SDFVN+MTLADLDPGTAKLAISFLGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGL+SFLNEILLGPQ
Subjt:  SDFVNNMTLADLDPGTAKLAISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQ

Query:  GLLVLLSQQVS
        GLLVLLSQQVS
Subjt:  GLLVLLSQQVS

XP_004136017.2 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X3 [Cucumis sativus]4.2e-9093.23Show/hide
Query:  MAATAACSSLSSIRRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKL
        MAAT ACSSLSSIRRGF YHPQRNPN KFQAIKC SSLLGSFTSSK  LSLAYVIPPLKPAAAYEAARTIPF LQDAS+AASDFVN+MTLADLDPGTAKL
Subjt:  MAATAACSSLSSIRRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKL

Query:  AISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        AISFLGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGL+SFLNEILLGPQGLLVLLSQQVS
Subjt:  AISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

XP_008451549.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic [Cucumis melo]1.8e-9395.83Show/hide
Query:  MAATAACSSLSSIRRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKL
        MAATAACSSLSSIRRGF YHPQRNPNYKFQAIKC SSLLGSFTSSKI  SLAYVIPPLKPAAAYEAARTIPFALQDAS+AASDFVN+MTLADLDPGTAKL
Subjt:  MAATAACSSLSSIRRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKL

Query:  AISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        AISFLGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  AISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

XP_031745003.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X2 [Cucumis sativus]8.8e-8892.23Show/hide
Query:  MAATAACSSLSSIR-RGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAK
        MAAT ACSSLSSIR  GF YHPQRNPN KFQAIKC SSLLGSFTSSK  LSLAYVIPPLKPAAAYEAARTIPF LQDAS+AASDFVN+MTLADLDPGTAK
Subjt:  MAATAACSSLSSIR-RGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAK

Query:  LAISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        LAISFLGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGL+SFLNEILLGPQGLLVLLSQQVS
Subjt:  LAISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

XP_038896183.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X2 [Benincasa hispida]1.7e-8689.36Show/hide
Query:  AACSSLSSIRRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKLAISF
        AACSSLS IRRGF YHPQRNPN +FQA KC SS+L SFT+SK+HLSLAY   PLKPAAAYEAARTIPFALQDAS++ASDF+NN+ LADLDPG AKLAI F
Subjt:  AACSSLSSIRRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKLAISF

Query:  LGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        LGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  LGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

TrEMBL top hitse value%identityAlignment
A0A0A0K9A7 Uncharacterized protein6.2e-8784.83Show/hide
Query:  MAATAACSSLSSIR-------------------RGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAA
        MAAT ACSSLSSIR                   RGF YHPQRNPN KFQAIKC SSLLGSFTSSK  LSLAYVIPPLKPAAAYEAARTIPF LQDAS+AA
Subjt:  MAATAACSSLSSIR-------------------RGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAA

Query:  SDFVNNMTLADLDPGTAKLAISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQ
        SDFVN+MTLADLDPGTAKLAISFLGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGL+SFLNEILLGPQ
Subjt:  SDFVNNMTLADLDPGTAKLAISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQ

Query:  GLLVLLSQQVS
        GLLVLLSQQVS
Subjt:  GLLVLLSQQVS

A0A1S3BSI7 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic8.9e-9495.83Show/hide
Query:  MAATAACSSLSSIRRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKL
        MAATAACSSLSSIRRGF YHPQRNPNYKFQAIKC SSLLGSFTSSKI  SLAYVIPPLKPAAAYEAARTIPFALQDAS+AASDFVN+MTLADLDPGTAKL
Subjt:  MAATAACSSLSSIRRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKL

Query:  AISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        AISFLGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  AISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

A0A5A7VQJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB31.1e-8694.97Show/hide
Query:  RRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKLAISFLGPFLSAFS
        +RGF YHPQRNPNYKFQAIKC SSLLGSFTSSKI  SLAYVIPPLKPAAAYEAARTIPFALQDAS+AASDFVN+MTLADLDPGTAKLAISFLGP LS FS
Subjt:  RRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKLAISFLGPFLSAFS

Query:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

A0A5D3D3A7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB33.1e-8694.41Show/hide
Query:  RRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKLAISFLGPFLSAFS
        +RGF YHPQRNPNYKFQAIKC SSLLGSFTSSKI  SLAYVIPPLKPAAAYEAARTIPFAL+DAS+AASDFVN+MTLADLDPGTAKLAISFLGP LS FS
Subjt:  RRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKLAISFLGPFLSAFS

Query:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  FLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

A0A6J1GQG0 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic8.9e-8689.06Show/hide
Query:  MAATAACSSLSSIRRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKL
        MAAT ACSSLS+IRRGFNYHPQ NPN +FQA KC SSLLGSFTSSKIHL L Y  PPLKP     AARTIPFALQDAS+AASDF+NN++LADLDPGTAKL
Subjt:  MAATAACSSLSSIRRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKL

Query:  AISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        AI FLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  AISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

SwissProt top hitse value%identityAlignment
Q8RWM7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic5.6e-4576.19Show/hide
Query:  EAARTIPFALQDASIAASDFVNNMTLADLDPGTAKLAISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV
        EAA T     Q  SI  S+ + N++LADLDPGTAKLAI  LGP LSAF FLFI RIVMSWYPKLPV KFPYV+AYAPTEP+L+ TRKVIPPL GVDVTPV
Subjt:  EAARTIPFALQDASIAASDFVNNMTLADLDPGTAKLAISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV

Query:  VWFGLVSFLNEILLGPQGLLVLLSQQ
        VWFGLVSFL+EIL+GPQGLLVL+SQQ
Subjt:  VWFGLVSFLNEILLGPQGLLVLLSQQ

Arabidopsis top hitse value%identityAlignment
AT4G27990.1 YGGT family protein8.4e-0429.11Show/hide
Query:  LGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG
        L  +L  +S + + R+++SW+P +P  + P        +P L   R +IPP+   +DV+P++ F ++  L  IL   +G
Subjt:  LGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG

AT5G36120.1 cofactor assembly, complex C (B6F)4.0e-4676.19Show/hide
Query:  EAARTIPFALQDASIAASDFVNNMTLADLDPGTAKLAISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV
        EAA T     Q  SI  S+ + N++LADLDPGTAKLAI  LGP LSAF FLFI RIVMSWYPKLPV KFPYV+AYAPTEP+L+ TRKVIPPL GVDVTPV
Subjt:  EAARTIPFALQDASIAASDFVNNMTLADLDPGTAKLAISFLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV

Query:  VWFGLVSFLNEILLGPQGLLVLLSQQ
        VWFGLVSFL+EIL+GPQGLLVL+SQQ
Subjt:  VWFGLVSFLNEILLGPQGLLVLLSQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCACCGCCGCCTGCTCCTCTCTCAGCTCCATTCGAAGAGGCTTCAATTACCATCCTCAAAGAAATCCAAACTACAAATTCCAAGCAATCAAATGTTGCTCATC
TTTGTTGGGTTCTTTTACCTCTTCCAAGATTCATCTGTCACTGGCCTATGTCATCCCTCCATTAAAGCCAGCTGCTGCTTACGAAGCTGCAAGGACTATCCCCTTTGCCT
TGCAAGATGCATCAATAGCTGCATCTGATTTTGTGAACAACATGACCTTGGCCGACCTCGACCCAGGAACAGCAAAGCTTGCGATCAGCTTTCTGGGGCCGTTTCTCTCA
GCGTTTTCGTTTTTGTTTATTGCTAGAATAGTAATGTCTTGGTATCCCAAGTTGCCCGTGGGGAAGTTTCCATATGTTATAGCTTATGCCCCCACTGAACCACTTCTAAT
TGCAACAAGGAAGGTGATCCCTCCTCTCGGCGGAGTTGACGTAACACCAGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGGCTGC
TTGTCCTCCTTTCTCAACAAGTCAGCTAA
mRNA sequenceShow/hide mRNA sequence
CTATTGATGATAAAGGGATAGCCTTCTCATTCTTCCTCTACCGGAGCTCCTCTGTGAAACCCATGGCCGCCACCGCCGCCTGCTCCTCTCTCAGCTCCATTCGAAGAGGC
TTCAATTACCATCCTCAAAGAAATCCAAACTACAAATTCCAAGCAATCAAATGTTGCTCATCTTTGTTGGGTTCTTTTACCTCTTCCAAGATTCATCTGTCACTGGCCTA
TGTCATCCCTCCATTAAAGCCAGCTGCTGCTTACGAAGCTGCAAGGACTATCCCCTTTGCCTTGCAAGATGCATCAATAGCTGCATCTGATTTTGTGAACAACATGACCT
TGGCCGACCTCGACCCAGGAACAGCAAAGCTTGCGATCAGCTTTCTGGGGCCGTTTCTCTCAGCGTTTTCGTTTTTGTTTATTGCTAGAATAGTAATGTCTTGGTATCCC
AAGTTGCCCGTGGGGAAGTTTCCATATGTTATAGCTTATGCCCCCACTGAACCACTTCTAATTGCAACAAGGAAGGTGATCCCTCCTCTCGGCGGAGTTGACGTAACACC
AGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGGCTGCTTGTCCTCCTTTCTCAACAAGTCAGCTAAATGTTGATGAGAATGCGTC
AGAGAAACATTTTTTTTTGTTTTTTTATTCTGTATATGTAACTGATCTTCTTAGCTGAGCCTCTCTCGTTCCAAAAGACAAAGAATGTGAGAACTTGAAATTCCTAATGA
AAGAAAAATTTTCCCATTCTAGAGAGTGTAATCGGTTCAGCTTCGGATTGGTTTTGACCTAAAACTGACTTGACCTCGTGTCATTTTGTTGTTTGAAAATTTGATCTTTC
AAGTTCCGAGCTAATCAAACTTCCTTGATAAAAATGGTGATTGAGATTACATTGCAATTGGCTTGAAGATGGTCTTATTCCAAACAATACAAAGCTTCTAACTTTCAAAT
TG
Protein sequenceShow/hide protein sequence
MAATAACSSLSSIRRGFNYHPQRNPNYKFQAIKCCSSLLGSFTSSKIHLSLAYVIPPLKPAAAYEAARTIPFALQDASIAASDFVNNMTLADLDPGTAKLAISFLGPFLS
AFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS