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PI0019019 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019019
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:5779817..5780059
RNA-Seq ExpressionPI0019019
SyntenyPI0019019
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033059.1 uncharacterized protein E6C27_scaffold269G001710 [Cucumis melo var. makuwa]6.2e-1973.68Show/hide
Query:  MSQGERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF
        MSQGE VPQ+QDP M +LQ +QG++E+M ED+QERR Q Q EERALQEDE+V+DLVEQERQVG  GN+RGRGRNNF
Subjt:  MSQGERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF

KAA0051908.1 putative gag protein [Cucumis melo var. makuwa]3.7e-1670.83Show/hide
Query:  GERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNN
        GE VP+V DPN+ ILQ +QGM+E+MRE+RQERR QQQRE R  QEDE + DL   ERQ+GGRGNVRGRGRNN
Subjt:  GERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNN

XP_022153198.1 uncharacterized protein LOC111020753 [Momordica charantia]4.4e-1781.69Show/hide
Query:  VPQV-QDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF
        VPQV QDPNM ILQ +QGMMEMM EDRQERR QQQREERALQED+   DL EQERQVGGR N RGRGRNNF
Subjt:  VPQV-QDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF

XP_022158838.1 uncharacterized protein LOC111025303 [Momordica charantia]2.2e-1680.28Show/hide
Query:  VPQV-QDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF
        VPQV QDPN  ILQ +QGMMEMM EDRQERR QQQREERALQED+   DL EQERQVGGR N RGRGRNNF
Subjt:  VPQV-QDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF

XP_038902315.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120088948 [Benincasa hispida]1.8e-1877.33Show/hide
Query:  MSQGERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNN
        MSQGE VPQVQD NM ILQ +QGMMEMMREDRQERR QQQ   R  QEDE VIDLVEQERQ+ G+GN+RG+GRNN
Subjt:  MSQGERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNN

TrEMBL top hitse value%identityAlignment
A0A5A7VII0 Uncharacterized protein1.8e-1670.83Show/hide
Query:  GERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNN
        GE VP+V DPN+ ILQ +QGM+E+MRE+RQERR QQQRE R  QEDE + DL   ERQ+GGRGNVRGRGRNN
Subjt:  GERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNN

A0A5D3BUV3 Uncharacterized protein3.0e-1973.68Show/hide
Query:  MSQGERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF
        MSQGE VPQ+QDP M +LQ +QG++E+M ED+QERR Q Q EERALQEDE+V+DLVEQERQVG  GN+RGRGRNNF
Subjt:  MSQGERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF

A0A5D3DRJ1 F15O4.131.8e-1670.83Show/hide
Query:  GERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNN
        GE VP+V DPN+ ILQ +QGM+E+MRE+RQERR QQQRE R  QEDE + DL   ERQ+GGRGNVRGRGRNN
Subjt:  GERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNN

A0A6J1DGU9 uncharacterized protein LOC1110207532.1e-1781.69Show/hide
Query:  VPQV-QDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF
        VPQV QDPNM ILQ +QGMMEMM EDRQERR QQQREERALQED+   DL EQERQVGGR N RGRGRNNF
Subjt:  VPQV-QDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF

A0A6J1DX75 uncharacterized protein LOC1110253031.1e-1680.28Show/hide
Query:  VPQV-QDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF
        VPQV QDPN  ILQ +QGMMEMM EDRQERR QQQREERALQED+   DL EQERQVGGR N RGRGRNNF
Subjt:  VPQV-QDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACAGGGTGAAAGAGTACCACAAGTACAAGATCCTAATATGACCATTCTTCAAGTCCTTCAAGGAATGATGGAAATGATGAGGGAAGATAGGCAAGAAAGAAGGAC
ACAACAACAAAGAGAAGAACGAGCTTTACAAGAAGATGAGCGAGTGATTGATTTAGTTGAACAAGAAAGACAAGTTGGAGGAAGAGGAAATGTGAGAGGAAGAGGAAGAA
ATAATTTTTTTGCAACGTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACAGGGTGAAAGAGTACCACAAGTACAAGATCCTAATATGACCATTCTTCAAGTCCTTCAAGGAATGATGGAAATGATGAGGGAAGATAGGCAAGAAAGAAGGAC
ACAACAACAAAGAGAAGAACGAGCTTTACAAGAAGATGAGCGAGTGATTGATTTAGTTGAACAAGAAAGACAAGTTGGAGGAAGAGGAAATGTGAGAGGAAGAGGAAGAA
ATAATTTTTTTGCAACGTCGTAA
Protein sequenceShow/hide protein sequence
MSQGERVPQVQDPNMTILQVLQGMMEMMREDRQERRTQQQREERALQEDERVIDLVEQERQVGGRGNVRGRGRNNFFATS