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PI0019054 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019054
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:13603286..13604182
RNA-Seq ExpressionPI0019054
SyntenyPI0019054
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046608.1 uncharacterized protein E6C27_scaffold114G001540 [Cucumis melo var. makuwa]1.1e-2533.56Show/hide
Query:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------
        MVGSA TNFSDVI IGERIEFGVKNG I+DPASETRR+MTPKKKEG+VHELSSTQRVAT VSS  VG                                 
Subjt:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMI
                                         FN+ D KK  C + +QCLFHPE  DHSIED  EFK+EVQKLM++K+L++GQMSMQE EV+MI
Subjt:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMI

KAA0055146.1 uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa]5.1e-2634.68Show/hide
Query:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------
        MVGSA TNFSDVITIGERIEFGVKNG I+DPASE RRMMTPKKKE ++HELSSTQRV  HVSS  VG                                 
Subjt:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD
                                         FN+ + +KF CA+ KQCLFHPEI DH IED  EFK+EVQKLMDAK+L+VGQMSMQE EVDMI+D
Subjt:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD

KAA0063019.1 uncharacterized protein E6C27_scaffold468G001210 [Cucumis melo var. makuwa]1.7e-2939.06Show/hide
Query:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------
        MVGSA TNFSDVIT+GE+IEFGVKNG I+DPASE RRMMTPKKKE ++HELSSTQRV  HVSS TVG                                 
Subjt:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------

Query:  --------------------------------------------------------------------------------------------FNSYDEKK
                                                                                                    FN+   +K
Subjt:  --------------------------------------------------------------------------------------------FNSYDEKK

Query:  FACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD
          C + KQCLFHPEI DH IED  EFK+EVQKLMDAK+L+VGQMSMQE EVDMI+D
Subjt:  FACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]1.8e-2633.9Show/hide
Query:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------
        MVGSA TNFSDVITIGERIEFGVKNG I+DPASETRR+MTPKKKEG+VHELSSTQRVAT VSS  VG                                 
Subjt:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMI
                                         FN+ D +K  C + +QCLFHPE  DHSIED  EFK+EVQKLMD+K+L++GQMSMQE EV+MI
Subjt:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMI

XP_016903339.1 PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]1.5e-2536.33Show/hide
Query:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------
        MVGSA TNFSDVITIGE IEFGVKNG I DP+SE RRMMTPKKKE ++HELSST++V  HVSS TVG                                 
Subjt:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD
           FN+ +  KF CA+ KQCLFHPEI DH IED  E K+EVQKLMDAK+L+VGQ+S+QE EVDMI+D
Subjt:  ---FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD

TrEMBL top hitse value%identityAlignment
A0A5A7T401 Retrotrans_gag domain-containing protein7.2e-2636.33Show/hide
Query:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------
        MVGSA TNFSDVITIGE IEFGVKNG I DP+SE RRMMTPKKKE ++HELSST++V  HVSS TVG                                 
Subjt:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD
           FN+ +  KF CA+ KQCLFHPEI DH IED  E K+EVQKLMDAK+L+VGQ+S+QE EVDMI+D
Subjt:  ---FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD

A0A5A7TUT4 Uncharacterized protein5.5e-2633.56Show/hide
Query:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------
        MVGSA TNFSDVI IGERIEFGVKNG I+DPASETRR+MTPKKKEG+VHELSSTQRVAT VSS  VG                                 
Subjt:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMI
                                         FN+ D KK  C + +QCLFHPE  DHSIED  EFK+EVQKLM++K+L++GQMSMQE EV+MI
Subjt:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMI

A0A5A7ULI2 Retrotrans_gag domain-containing protein2.5e-2634.68Show/hide
Query:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------
        MVGSA TNFSDVITIGERIEFGVKNG I+DPASE RRMMTPKKKE ++HELSSTQRV  HVSS  VG                                 
Subjt:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD
                                         FN+ + +KF CA+ KQCLFHPEI DH IED  EFK+EVQKLMDAK+L+VGQMSMQE EVDMI+D
Subjt:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD

A0A5A7VAU5 Uncharacterized protein8.5e-2733.9Show/hide
Query:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------
        MVGSA TNFSDVITIGERIEFGVKNG I+DPASETRR+MTPKKKEG+VHELSSTQRVAT VSS  VG                                 
Subjt:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMI
                                         FN+ D +K  C + +QCLFHPE  DHSIED  EFK+EVQKLMD+K+L++GQMSMQE EV+MI
Subjt:  ---------------------------------FNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMI

A0A5A7VBN6 Retrotrans_gag domain-containing protein8.2e-3039.06Show/hide
Query:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------
        MVGSA TNFSDVIT+GE+IEFGVKNG I+DPASE RRMMTPKKKE ++HELSSTQRV  HVSS TVG                                 
Subjt:  MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVG---------------------------------

Query:  --------------------------------------------------------------------------------------------FNSYDEKK
                                                                                                    FN+   +K
Subjt:  --------------------------------------------------------------------------------------------FNSYDEKK

Query:  FACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD
          C + KQCLFHPEI DH IED  EFK+EVQKLMDAK+L+VGQMSMQE EVDMI+D
Subjt:  FACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMDAKVLMVGQMSMQEAEVDMIMD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAAGTGCCTTGACTAATTTCTCGGACGTCATAACAATTGGGGAGAGGATCGAATTTGGAGTGAAGAATGGAATTATCACTGATCCTGCTTCAGAGACAAGAAG
GATGATGACCCCAAAGAAAAAAGAGGGAAAAGTACACGAGTTAAGCTCGACTCAAAGAGTAGCGACACATGTATCCTCATCAACTGTGGGGTTTAACAGTTATGACGAGA
AGAAGTTTGCATGCGCCAGTGGGAAGCAATGTTTATTTCACCCTGAGATAGTTGACCATTCCATTGAGGATTACTTGGAGTTTAAGAGTGAGGTACAAAAGCTGATGGAT
GCAAAGGTTCTAATGGTAGGACAGATGAGCATGCAAGAAGCCGAGGTTGACATGATTATGGATACTTTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAAGTGCCTTGACTAATTTCTCGGACGTCATAACAATTGGGGAGAGGATCGAATTTGGAGTGAAGAATGGAATTATCACTGATCCTGCTTCAGAGACAAGAAG
GATGATGACCCCAAAGAAAAAAGAGGGAAAAGTACACGAGTTAAGCTCGACTCAAAGAGTAGCGACACATGTATCCTCATCAACTGTGGGGTTTAACAGTTATGACGAGA
AGAAGTTTGCATGCGCCAGTGGGAAGCAATGTTTATTTCACCCTGAGATAGTTGACCATTCCATTGAGGATTACTTGGAGTTTAAGAGTGAGGTACAAAAGCTGATGGAT
GCAAAGGTTCTAATGGTAGGACAGATGAGCATGCAAGAAGCCGAGGTTGACATGATTATGGATACTTTTTTCTAG
Protein sequenceShow/hide protein sequence
MVGSALTNFSDVITIGERIEFGVKNGIITDPASETRRMMTPKKKEGKVHELSSTQRVATHVSSSTVGFNSYDEKKFACASGKQCLFHPEIVDHSIEDYLEFKSEVQKLMD
AKVLMVGQMSMQEAEVDMIMDTFF