CuGenDBv2

Gene ID	PI0019056
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	30S ribosomal protein S8, chloroplastic
Genome location	chr04:24558260..24558577
RNA-Seq Expression	PI0019056
Synteny	PI0019056
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR000630 - Ribosomal protein S8 IPR035987 - Ribosomal protein S8 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

YP_004841819.1 ribosomal protein S8 [Cucumis melo subsp. melo]

4.7e-43

95.79

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFI NVRKHRESNKDFWVLTLRHRRNRKGPYKTI NLK+ISRPGLRIYSNY+K
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

YP_009525221.1 ribosomal protein S8 [Hodgsonia macrocarpa]

1.1e-42

94.74

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFI NVRKHRESNKDFWVLTLRHRRNRKGPYKTI NLK+ISRPGLRIYSNY++
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

YP_009752278.1 ribosomal protein S8 [Trichosanthes baviensis]

1.1e-42

94.74

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFI NVRKHRESNKDFWVLTLRHRRNRKGPYKTI NLK+ISRPGLRIYSNY++
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

YP_009752701.1 ribosomal protein S8 [Ampelosycios humblotii]

1.1e-42

94.74

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFI NVRKHRESNKDFWVLTLRHRRNRKGPYKTI NLK+ISRPGLRIYSNY++
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

YP_009945451.1 ribosomal protein S8 [Sechium edule]

8.0e-43

94.74

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIANIITSIRNADMNRKGMVRIPSTNI ENIVKILLREGFI NVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLK+ISRPGLRIYSNY++
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU50 30S ribosomal protein S8, chloroplastic

2.3e-43

95.79

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFI NVRKHRESNKDFWVLTLRHRRNRKGPYKTI NLK+ISRPGLRIYSNY+K
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

A0A249RXN0 30S ribosomal protein S8, chloroplastic

2.3e-43

95.79

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFI NVRKHRESNKDFWVLTLRHRRNRKGPYKTI NLK+ISRPGLRIYSNY+K
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

A0A249RZ88 30S ribosomal protein S8, chloroplastic

2.3e-43

95.79

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFI NVRKHRESNKDFWVLTLRHRRNRKGPYKTI NLK+ISRPGLRIYSNY+K
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

A0A286NFR6 30S ribosomal protein S8, chloroplastic

2.3e-43

95.79

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFI NVRKHRESNKDFWVLTLRHRRNRKGPYKTI NLK+ISRPGLRIYSNY+K
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

A0A2Z2CM14 30S ribosomal protein S8, chloroplastic

2.3e-43

95.79

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFI NVRKHRESNKDFWVLTLRHRRNRKGPYKTI NLK+ISRPGLRIYSNY+K
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

SwissProt top hits

e value

%identity

Alignment

A0ZZ70 30S ribosomal protein S8, chloroplastic

8.1e-38

82.11

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIA+IITSIRNADMNRKG ++I STNITENIV+ILLREGFI NVRKHRE NK F VLTLRHRRNRKGP++TI NL++ISRPGLRIYSNY++
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

A7Y3I5 30S ribosomal protein S8, chloroplastic

6.2e-38

82.11

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MG+DTIA IITSIRNADM+RK +VRI STNITENIV+ILLREGFI NVRKHRE NK+F+VLTLRHRRNRK PY+ IFNLK+ISRPGLRIYSNY++
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

Q2L942 30S ribosomal protein S8, chloroplastic

2.8e-38

83.16

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIA+IITSIRNADMNRKG ++I STNITENIVKILLREGFI NVRKHRE NK F VLTLRHRRNRKGP++TI NL++ISRPGLRIYSNY++
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

Q49KW3 30S ribosomal protein S8, chloroplastic

9.6e-39

83.16

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MG+DTIA+IITSIRNADMNRKG ++I STNITENIVKILLREGFI NVRKH+E+NK F VLTLRHRRNRKGPY+TI NLK+ISRPGLRIYSNY++
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

Q4VZK0 30S ribosomal protein S8, chloroplastic

1.4e-45

94.74

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIANIITSIRNADMNRKGMVRIP+TNITENIVKILLREGFI NVRKHRESNKDFWVLTLRHRRNRKGPYKTI NLK+ISRPGLRIYSNY+K
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

Arabidopsis top hits

e value

%identity

Alignment

ATCG00770.1 ribosomal protein S8

4.1e-37

81.05

Show/hide

Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK
        MGKDTIA+IITSIRNADMNRKG VRI STNITE+IVKILLREGFI NVRKHRE+N+ F +LTLRHRRN+K  YKTI NLK+ISRPGLRIYSN ++
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKK

Sequences

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CDS sequence

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ATGGGTAAGGACACTATTGCTAACATAATAACCTCTATTCGCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTGAA
AATACTTTTACGAGAAGGTTTTATTGGAAACGTAAGGAAACATCGGGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATA
AAACGATTTTCAATTTAAAACAGATCAGTCGACCTGGTCTCCGAATATATTCTAACTATAAAAAATTCCTAGAATTTTCGGCGGAATGGGCATTGTAA

mRNA sequence

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Protein sequence

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MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIGNVRKHRESNKDFWVLTLRHRRNRKGPYKTIFNLKQISRPGLRIYSNYKKFLEFSAEWAL

PI0019056 (gene) of Melon (PI 482460) v1 genome