; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019093 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019093
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:12777533..12778231
RNA-Seq ExpressionPI0019093
SyntenyPI0019093
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046928.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-5862.23Show/hide
Query:  AAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSGSKRKRGGQALE
        AAKGLLNK F HYD++SYVFG+DRATGGRAEIFAD+GSN P G+D F A    DT+FP  YS GL+MS D++M T++ R+SE R  SSGSKRKR G A +
Subjt:  AAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSGSKRKRGGQALE

Query:  AAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN
        + +I+R+A+EY N+ L  IA+WP  QRQDA+ TR E+VR L+ IPEL+ +DR R MRI++RNVDDMKAFL++PD +K  YCT+ILQ+N
Subjt:  AAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN

KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-6162.31Show/hide
Query:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG
        EV    V+S  AAKGLLNK F HYD++SYVFG+DRATGGRAE FAD+GSN PAGYD F A D +DT+F  MYS GL+MS D++M T++ R+SE R  SSG
Subjt:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG

Query:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN
        SKRKR G A ++ +I+R+AMEY N+ L  IA+WP  QRQDA+ TR E+VRQL+ IPEL+ +DR R MRI++RNVDDMKAFL++PD +K  YC++ILQ+N
Subjt:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]3.3e-5960.3Show/hide
Query:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG
        EV    V+S  AAKGLLNK FPHYD++SYVF +D ATGGRAE FADVGSN P GYD F A   +DT+F  MYS+GL+MS D +MGT++ R+SEGR  SSG
Subjt:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG

Query:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN
        SK+KRGG  +++ +I+R+A+EY N+ L  IA+W   QRQDA+ TR EVVRQL+ IPEL+ +DR R MRI+I NV+DMKAFL++PD +K  YC++IL++N
Subjt:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN

KAA0050216.1 retrotransposon protein [Cucumis melo var. makuwa]9.5e-5960.62Show/hide
Query:  VQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSGSKRKRG
        V+S  AAKGLLNK F HYD++SYVFG+DRATGGR E FAD+G N PA YD F A    DT+FP MYSQGL+MS D++MGT++ R+SE R   SGSKRKR 
Subjt:  VQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSGSKRKRG

Query:  GQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN
        G A ++ +I+R+A+EY N+ +  IA+WP  QRQDAS TR E+VRQL+ IPEL+ +DR R M I++RNVDDMKAFL++PD +K  Y  +ILQ+N
Subjt:  GQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN

KAA0050782.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-5961.31Show/hide
Query:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG
        EV    V+S  AAKGLLNK F HYD++SYVFG+DRATGGRAE FAD+GSN PAGYD F A    DT+FP MYS GL+MS D++M T++ R+SE R  SSG
Subjt:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG

Query:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN
        SK KR G A ++ +I+R+A+EY N+ L  IA+WP  QRQDA+ TR E+VRQL+ IPEL+ +DR R MRI++RNVDDMKAFL +PD +K  YC++ILQ+N
Subjt:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN

TrEMBL top hitse value%identityAlignment
A0A5A7TVM3 Retrotransposon protein6.0e-5962.23Show/hide
Query:  AAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSGSKRKRGGQALE
        AAKGLLNK F HYD++SYVFG+DRATGGRAEIFAD+GSN P G+D F A    DT+FP  YS GL+MS D++M T++ R+SE R  SSGSKRKR G A +
Subjt:  AAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSGSKRKRGGQALE

Query:  AAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN
        + +I+R+A+EY N+ L  IA+WP  QRQDA+ TR E+VR L+ IPEL+ +DR R MRI++RNVDDMKAFL++PD +K  YCT+ILQ+N
Subjt:  AAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN

A0A5A7TYQ6 Retrotransposon protein9.9e-6262.31Show/hide
Query:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG
        EV    V+S  AAKGLLNK F HYD++SYVFG+DRATGGRAE FAD+GSN PAGYD F A D +DT+F  MYS GL+MS D++M T++ R+SE R  SSG
Subjt:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG

Query:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN
        SKRKR G A ++ +I+R+AMEY N+ L  IA+WP  QRQDA+ TR E+VRQL+ IPEL+ +DR R MRI++RNVDDMKAFL++PD +K  YC++ILQ+N
Subjt:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN

A0A5A7TZA5 Retrotransposon protein1.6e-5960.3Show/hide
Query:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG
        EV    V+S  AAKGLLNK FPHYD++SYVF +D ATGGRAE FADVGSN P GYD F A   +DT+F  MYS+GL+MS D +MGT++ R+SEGR  SSG
Subjt:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG

Query:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN
        SK+KRGG  +++ +I+R+A+EY N+ L  IA+W   QRQDA+ TR EVVRQL+ IPEL+ +DR R MRI+I NV+DMKAFL++PD +K  YC++IL++N
Subjt:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN

A0A5A7U4M2 Retrotransposon protein5.4e-6061.31Show/hide
Query:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG
        EV    V+S  AAKGLLNK F HYD++SYVFG+DRATGGRAE FAD+GSN PAGYD F A    DT+FP MYS GL+MS D++M T++ R+SE R  SSG
Subjt:  EVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSG

Query:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN
        SK KR G A ++ +I+R+A+EY N+ L  IA+WP  QRQDA+ TR E+VRQL+ IPEL+ +DR R MRI++RNVDDMKAFL +PD +K  YC++ILQ+N
Subjt:  SKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN

A0A5A7U7R0 Retrotransposon protein4.6e-5960.62Show/hide
Query:  VQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSGSKRKRG
        V+S  AAKGLLNK F HYD++SYVFG+DRATGGR E FAD+G N PA YD F A    DT+FP MYSQGL+MS D++MGT++ R+SE R   SGSKRKR 
Subjt:  VQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTGSSGSKRKRG

Query:  GQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN
        G A ++ +I+R+A+EY N+ +  IA+WP  QRQDAS TR E+VRQL+ IPEL+ +DR R M I++RNVDDMKAFL++PD +K  Y  +ILQ+N
Subjt:  GQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCATTGCCTAGAAAGACTTGTACGACAATTGGGTGAAGTTCCTACAACACTTGTACAGAGTCCTTCAGCCGCGAAGGGCCTCCTAAACAAACTTTTTCCCCATTA
CGACGACATTTCCTACGTCTTTGGAAGAGATCGTGCAACAGGAGGTCGGGCTGAAATCTTTGCCGATGTTGGGTCGAACGTGCCTGCAGGATACGATGAATTTCTCGCTT
ATGATGGGAACGATACGGAGTTCCCGACGATGTACAGTCAGGGACTGGACATGTCACTTGACAACATAATGGGTACACAATCCGATCGGTTGTCTGAGGGTAGGACTGGT
TCGAGTGGTTCGAAGAGGAAACGGGGAGGGCAGGCGTTGGAGGCGGCAGAAATTATTCGCAGTGCCATGGAATATGCTAATGACCACTTGAAGGCCATTGCAAAATGGCC
CAAAGAACAACGGCAAGATGCAAGCGTGACACGTGCGGAAGTCGTTAGACAACTGCAGGGAATCCCAGAGCTGAGTAGACTGGATAGGATTCGTTGTATGCGTATAATGA
TACGCAATGTGGATGACATGAAAGCATTTCTAGACATCCCGGACGAGCTTAAATTGGATTACTGCACGGTCATTCTCCAAGATAACGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCATTGCCTAGAAAGACTTGTACGACAATTGGGTGAAGTTCCTACAACACTTGTACAGAGTCCTTCAGCCGCGAAGGGCCTCCTAAACAAACTTTTTCCCCATTA
CGACGACATTTCCTACGTCTTTGGAAGAGATCGTGCAACAGGAGGTCGGGCTGAAATCTTTGCCGATGTTGGGTCGAACGTGCCTGCAGGATACGATGAATTTCTCGCTT
ATGATGGGAACGATACGGAGTTCCCGACGATGTACAGTCAGGGACTGGACATGTCACTTGACAACATAATGGGTACACAATCCGATCGGTTGTCTGAGGGTAGGACTGGT
TCGAGTGGTTCGAAGAGGAAACGGGGAGGGCAGGCGTTGGAGGCGGCAGAAATTATTCGCAGTGCCATGGAATATGCTAATGACCACTTGAAGGCCATTGCAAAATGGCC
CAAAGAACAACGGCAAGATGCAAGCGTGACACGTGCGGAAGTCGTTAGACAACTGCAGGGAATCCCAGAGCTGAGTAGACTGGATAGGATTCGTTGTATGCGTATAATGA
TACGCAATGTGGATGACATGAAAGCATTTCTAGACATCCCGGACGAGCTTAAATTGGATTACTGCACGGTCATTCTCCAAGATAACGTTTGA
Protein sequenceShow/hide protein sequence
MHHCLERLVRQLGEVPTTLVQSPSAAKGLLNKLFPHYDDISYVFGRDRATGGRAEIFADVGSNVPAGYDEFLAYDGNDTEFPTMYSQGLDMSLDNIMGTQSDRLSEGRTG
SSGSKRKRGGQALEAAEIIRSAMEYANDHLKAIAKWPKEQRQDASVTRAEVVRQLQGIPELSRLDRIRCMRIMIRNVDDMKAFLDIPDELKLDYCTVILQDNV