; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019108 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019108
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReplication protein A 32 kDa subunit B-like
Genome locationchr02:21621522..21625196
RNA-Seq ExpressionPI0019108
SyntenyPI0019108
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453602.1 PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis melo]3.5e-15498.92Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTN+SNTP+KGYQAPIAN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

XP_011656845.1 replication protein A 32 kDa subunit B [Cucumis sativus]3.9e-15398.56Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTN+SNTPMK YQAPIAN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

XP_022988280.1 replication protein A 32 kDa subunit B [Cucurbita maxima]4.9e-14893.86Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMT QPQM N+SNTP++GYQ P++N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGD WK+LEQMVLDFLQLPSCD+ERGAHRDVIAQ LKVPLEKL+PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

XP_023516911.1 replication protein A 32 kDa subunit B-like isoform X1 [Cucurbita pepo subsp. pepo]6.4e-14893.86Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMT QPQM N+SNTP++GYQ PI+N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QY+GQAGGD WK+LEQMVLDFLQLPSCD+ERGAHRDVIAQ LKVPLEKL+PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

XP_038880298.1 replication protein A 32 kDa subunit B [Benincasa hispida]3.4e-14996.39Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTG ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQ SS+ TQPQM N+SNTPMKGYQAP++N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGD WKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

TrEMBL top hitse value%identityAlignment
A0A1S4DZE3 replication protein A 32 kDa subunit B-like1.7e-15498.92Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTN+SNTP+KGYQAPIAN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

A0A5D3CIS3 Replication protein A 32 kDa subunit B-like1.7e-15498.92Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTN+SNTP+KGYQAPIAN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

A0A6J1E235 replication protein A 32 kDa subunit B-like isoform X21.1e-14593.14Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLR QQSSSMT QPQM N+SNTP++GYQ PI+N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGD WK+LEQMVLDFLQLPSCD+ERGAHRDVIAQ L VPLEKL+PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

A0A6J1E347 replication protein A 32 kDa subunit B-like isoform X11.2e-14793.5Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMT QPQM N+SNTP++GYQ PI+N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGD WK+LEQMVLDFLQLPSCD+ERGAHRDVIAQ L VPLEKL+PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

A0A6J1JJ51 replication protein A 32 kDa subunit B2.4e-14893.86Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMT QPQM N+SNTP++GYQ P++N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGD WK+LEQMVLDFLQLPSCD+ERGAHRDVIAQ LKVPLEKL+PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

SwissProt top hitse value%identityAlignment
Q6H7J5 Replication protein A 32 kDa subunit B7.6e-5137.5Show/hide
Query:  GSQFDG-----NAAFSGGGFMPSQTTQAPDHSFSPA----KNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALD
        G  +DG     ++ F GGGFMPSQ T A + +        K+R+ QALLPLTVKQI DA  ++DDKSNF ++G++V+ V+LVG + N+  R+TDV+F LD
Subjt:  GSQFDG-----NAAFSGGGFMPSQTTQAPDHSFSPA----KNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKG
        DGTGR+  ++W N++ D+ E+  I +G YV V+G LK FQGKR +  +S+R +T++N++T+HF+  ++VH   TR + Q +++  T      +    M  
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKG

Query:  YQAPIANQ---YTGQAGGDSWKSLEQMVLDFLQLPS-CDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
         Q+P+ NQ   ++      +  ++  +VL+    P+  + + G   D ++++L +P E +   + +  + G +Y+T DD+H+KST NG
Subjt:  YQAPIANQ---YTGQAGGDSWKSLEQMVLDFLQLPS-CDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

Q6K9U2 Replication protein A 32 kDa subunit A1.5e-4339.43Show/hide
Query:  AFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDA---FLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNE
        AFS   F  SQ   A   S +P+K+R   + +PLTVKQI++A    ++ +  + FV+DGV+  NV+LVG+V  +  R TDV+F +DDGTGR+D  +WVN+
Subjt:  AFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDA---FLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNE

Query:  AADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR---------KQQSSSMTTQPQMTNISNTPMKGYQAPI
         ADS E   + +GMYV V G LK  Q ++    F+IRPVTDYNE+T HFI+ + +H  NT+ +            SSS     +MT  + T +K   AP+
Subjt:  AADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR---------KQQSSSMTTQPQMTNISNTPMKGYQAPI

Query:  ANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN
         +   G     S   L   VL+  + P + +SE G H D I ++ ++P  K+  A+  L + G IYST D+ H+KS  N
Subjt:  ANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN

Q8LFJ8 Replication protein A 32 kDa subunit B1.9e-7050.71Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYG  FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +     RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMTTQPQMT-NISNTPMKGYQAP
        C +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI +HF E +YVH YNT+LR       + T +PQM  +   TP K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMTTQPQMT-NISNTPMKGYQAP

Query:  IANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN
         +NQ+  Q   DS   ++Q VL++L  P    SE G H D+IA++L++PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  IANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN

Q92373 Replication factor A protein 26.0e-2431.96Show/hide
Query:  YGSQFDGNAAFS-----GGGFMPSQTTQAPDHSFSPAKNRDVQA---LLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALD
        YG  F  N+AFS     G GF         D S  P+ +R   A   L P+T+KQI +A     D + F IDGV+V  V  VG++RN   + T+ T+ ++
Subjt:  YGSQFDGNAAFS-----GGGFMPSQTTQAPDHSFSPAKNRDVQA---LLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKG
        DGTG I+   W +  A S     +    YVRV+G++K F GK  +    IR + D+NE+  HF+E+I VH +            T +    N +N P  G
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKG

Query:  YQAPIANQYTGQAGGDSWKSLEQMVLDFLQLP-----------SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKS
        Y    A  Y   +   +  SLEQ + ++   P           + ++  G H   +AQ +   ++ L      L++EG+IY+T D+ HFKS
Subjt:  YQAPIANQYTGQAGGDSWKSLEQMVLDFLQLP-----------SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKS

Q9ZQ19 Replication protein A 32 kDa subunit A3.4e-6748.72Show/hide
Query:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS +KS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NISNTPMKGYQAPIAN
        +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IE I+ +  N+  ++QQ   +T     T    SNT       P+ +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFK
               G+  K+L+ M+LD+L+ P+C + ++G H D IAQQLK+P  KL   +++LE +GLIYST D+YHFK
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A22.4e-6848.72Show/hide
Query:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS +KS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NISNTPMKGYQAPIAN
        +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IE I+ +  N+  ++QQ   +T     T    SNT       P+ +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFK
               G+  K+L+ M+LD+L+ P+C + ++G H D IAQQLK+P  KL   +++LE +GLIYST D+YHFK
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFK

AT2G24490.2 replicon protein A22.4e-6848.72Show/hide
Query:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS +KS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NISNTPMKGYQAPIAN
        +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IE I+ +  N+  ++QQ   +T     T    SNT       P+ +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NISNTPMKGYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFK
               G+  K+L+ M+LD+L+ P+C + ++G H D IAQQLK+P  KL   +++LE +GLIYST D+YHFK
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFK

AT3G02920.1 Replication protein A, subunit RPA321.4e-7150.71Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYG  FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +     RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMTTQPQMT-NISNTPMKGYQAP
        C +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI +HF E +YVH YNT+LR       + T +PQM  +   TP K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMTTQPQMT-NISNTPMKGYQAP

Query:  IANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN
         +NQ+  Q   DS   ++Q VL++L  P    SE G H D+IA++L++PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  IANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN

AT3G02920.2 Replication protein A, subunit RPA322.4e-6848Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQ-TTQAPDHSF-------------------SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRN
        MYG  FDGNAAF+GGGFMPSQ TTQA + S                    S  +NRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +  
Subjt:  MYGSQFDGNAAFSGGGFMPSQ-TTQAPDHSF-------------------SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRN

Query:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMT
           RIT V F +DDGTG +DC +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI +HF E +YVH YNT+LR       + T
Subjt:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMT

Query:  TQPQMT-NISNTPMKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN
         +PQM  +   TP K YQ   +NQ+  Q   DS   ++Q VL++L  P    SE G H D+IA++L++PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  TQPQMT-NISNTPMKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGAAGTCAATTCGACGGCAACGCTGCCTTCTCTGGTGGTGGATTTATGCCATCTCAGACCACCCAGGCCCCTGATCATTCATTCTCTCCGGCGAAAAATCGGGA
TGTCCAGGCATTGCTTCCATTAACTGTGAAACAGATAAACGACGCATTTCTGTCTAGTGATGATAAATCAAATTTTGTTATTGATGGTGTTGATGTTAACAATGTTAAGC
TTGTAGGAATGGTGCGTAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCACTGGACGATGGCACTGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCTGCAGAT
TCAAATGAAGTTGAGGGAATATTGGATGGCATGTATGTCCGGGTCCACGGCCACTTAAAGAGCTTCCAGGGTAAAAGAACTTTAAATGTCTTTTCTATCAGGCCAGTGAC
GGATTATAACGAGATCACAAATCACTTCATCGAATCCATATATGTTCATTTTTACAACACCAGATTGCGGAAACAACAAAGTAGTAGTATGACCACTCAGCCACAGATGA
CAAATATATCTAATACGCCCATGAAAGGATATCAAGCTCCCATTGCAAATCAATACACTGGTCAAGCGGGTGGTGATAGTTGGAAGAGCCTTGAGCAGATGGTCTTAGAT
TTTCTGCAACTTCCTTCATGCGATTCTGAGAGGGGCGCACACCGTGATGTCATTGCTCAACAGCTCAAAGTTCCACTAGAGAAGCTCATTCCGGCGATGAAAAATCTAGA
AGAGGAAGGCCTAATCTACTCAACAACTGATGATTACCACTTCAAATCAACCGCCAACGGTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAATGGCGGGAGGGAAGCTGAAGTGGGATTTCTAGGTTTTACCAAAACAAAATTTCATTTCTCAAACTGCTCTTCAAACTTCGCTCGATCAGTAACGATGTATGGAA
GTCAATTCGACGGCAACGCTGCCTTCTCTGGTGGTGGATTTATGCCATCTCAGACCACCCAGGCCCCTGATCATTCATTCTCTCCGGCGAAAAATCGGGATGTCCAGGCA
TTGCTTCCATTAACTGTGAAACAGATAAACGACGCATTTCTGTCTAGTGATGATAAATCAAATTTTGTTATTGATGGTGTTGATGTTAACAATGTTAAGCTTGTAGGAAT
GGTGCGTAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCACTGGACGATGGCACTGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCTGCAGATTCAAATGAAG
TTGAGGGAATATTGGATGGCATGTATGTCCGGGTCCACGGCCACTTAAAGAGCTTCCAGGGTAAAAGAACTTTAAATGTCTTTTCTATCAGGCCAGTGACGGATTATAAC
GAGATCACAAATCACTTCATCGAATCCATATATGTTCATTTTTACAACACCAGATTGCGGAAACAACAAAGTAGTAGTATGACCACTCAGCCACAGATGACAAATATATC
TAATACGCCCATGAAAGGATATCAAGCTCCCATTGCAAATCAATACACTGGTCAAGCGGGTGGTGATAGTTGGAAGAGCCTTGAGCAGATGGTCTTAGATTTTCTGCAAC
TTCCTTCATGCGATTCTGAGAGGGGCGCACACCGTGATGTCATTGCTCAACAGCTCAAAGTTCCACTAGAGAAGCTCATTCCGGCGATGAAAAATCTAGAAGAGGAAGGC
CTAATCTACTCAACAACTGATGATTACCACTTCAAATCAACCGCCAACGGTTGACGTTTCTATTATGGTAACTAATGAATTGAAGGGAAGTTTTTTTCCTGCCGTTGTTT
CGTTTCATCTATAGTTTAAGTTTGGGTAAATCACTGTAGTCAAAACATGACCCTGAAACATCTGTTTTAGCCTCTATAACAGCGATCCAAAAGCCCACATGTCTATTGCT
TGTTGATAGTTGATGCTTTTATTGTGATGTTTGTTTGTATTGTTCAACATATTTGGAGTGTGGTAATACAGCACAGGGTGCCAGCAGCCTGGAGAGGTTGATTTGGCCGA
TTCCAGAACTGCTTTCCAATCCGCAAACAGTAACTTACTTTTTCCCTTGCGAAGTTAGAGGATAGAACACTGTTCATTTCTTTTACATGCATCGCCAACTAACTCAAAAC
TTTTAAACCAATAGG
Protein sequenceShow/hide protein sequence
MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAAD
SNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNISNTPMKGYQAPIANQYTGQAGGDSWKSLEQMVLD
FLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG