CuGenDBv2

Gene ID	PI0019113
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	30S ribosomal protein S15, chloroplastic
Genome location	tig00003741:90887..91159
RNA-Seq Expression	PI0019113
Synteny	PI0019113
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR000589 - Ribosomal protein S15 IPR005290 - Ribosomal protein S15, bacterial-type IPR009068 - S15/NS1, RNA-binding

Homology

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GenBank top hits

e value

%identity

Alignment

ABI98802.1 ribosomal protein S15 [Cucumis sativus]

1.1e-37

98.89

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLR+ILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

QHB76022.1 ribosomal protein S15 [Cucumis melo subsp. melo]

3.9e-38

100

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

YP_004841842.1 ribosomal protein S15 [Cucumis melo subsp. melo]

1.1e-37

98.89

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLR+ILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

YP_009560892.1 ribosomal protein S15 [Trichosanthes kirilowii]

2.5e-37

97.78

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVV+FTNKIRRLTSHLELHKKDYLSQRGLR+ILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

YP_009752722.1 ribosomal protein S15 [Ampelosycios humblotii]

4.3e-37

97.78

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQV SFTNKIRRLTSHLELHKKDYLSQRGLR+ILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU67 30S ribosomal protein S15, chloroplastic

5.5e-38

98.89

Show/hide

Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLR+ILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

A0A1X9Q1Q7 30S ribosomal protein S15, chloroplastic

5.5e-38

98.89

Show/hide

Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLR+ILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

A0A218KG95 30S ribosomal protein S15, chloroplastic

5.5e-38

98.89

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLR+ILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

A0A249RZG6 30S ribosomal protein S15, chloroplastic

5.5e-38

98.89

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLR+ILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

A0A6B9M323 30S ribosomal protein S15, chloroplastic

1.9e-38

100

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

SwissProt top hits

e value

%identity

Alignment

A4GYX3 30S ribosomal protein S15, chloroplastic

3.6e-34

84.44

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVK+SF S+ISQE+KKEN GSVEFQ+VSFTNKIRRLTSHLELH+KDYLSQRGLR+ILGKRQRLLSYL+KKN +RYKELI+QL+IRESKT+
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

B1NWK6 30S ribosomal protein S15, chloroplastic

1.2e-34

85.56

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSF SVISQEEK EN GSVEFQ+VSFTNKIRRLTSH ELH+KDYLSQRGLR+ILGKRQRLLSYL+KKN++RYKELI++LDIRESKT+
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

Q14FA1 30S ribosomal protein S15, chloroplastic

3.6e-34

84.44

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVK+SF S+ISQE+KKEN GSVEFQ+VSFTNKIRRLTSHLELH+KDYLSQRGLR+ILGKRQRLLSYL+KKN +RYKELI+QL+IRESKT+
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

Q49KU1 30S ribosomal protein S15, chloroplastic

1.4e-33

85.71

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Query:  MVKNSFSSVISQ-EEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSF SVISQ EEK+EN GS+EFQV  FTNKIRRLTSHLELH+KDYLSQRGLR+ILGKRQRLLSYLSKKN++RYKELI+QLDIRESKT+
Subjt:  MVKNSFSSVISQ-EEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

Q4VZL1 30S ribosomal protein S15, chloroplastic

1.5e-40

98.89

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLR+ILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G15810.1 S15/NS1, RNA-binding protein

2.3e-04

38.24

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Query:  GSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRES
        GS   QV   T KI+ L+S   LHKKD  S++GL  ++ KR++LL YL + +   Y  ++++L +R++
Subjt:  GSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRES

ATCG01120.1 chloroplast ribosomal protein S15

5.5e-30

76.67

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        M+KN   S   +E+K+E+ GSVEFQV SFTNKIRRLTSHLELH+KDYLSQRGLR+ILGKRQRLL+YLSKKN++RYKELINQL+IRE KT+
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTAAAAAATTCATTCAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCTGTTGAATTTCAAGTAGTCAGTTTCACCAATAAGATACGAAGACTTAC
GTCACATTTGGAATTGCACAAAAAAGACTATTTATCTCAAAGAGGTCTACGTCAAATTCTCGGAAAGCGCCAACGATTACTTTCTTATTTATCAAAGAAAAATAAAATGC
GTTATAAAGAATTAATTAATCAATTGGATATTCGGGAGTCAAAAACTCAGTAA

mRNA sequence

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Protein sequence

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MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

PI0019113 (gene) of Melon (PI 482460) v1 genome