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PI0019147 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019147
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRAB6-interacting golgin
Genome locationchr12:18556551..18560208
RNA-Seq ExpressionPI0019147
SyntenyPI0019147
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139478.1 uncharacterized protein LOC101203874 [Cucumis sativus]1.4e-7998.86Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNG-IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNG IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREK+EARLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNG-IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

XP_008461743.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo]3.3e-8198.29Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREK+EARLGRAEEATKRLAEIREELEGMTDPMRKEV
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH
        SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH

XP_022142637.1 uncharacterized protein LOC111012700 [Momordica charantia]5.2e-7188.83Show/hide
Query:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPM
        MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+K+EARLGRAEEATKRLAEIREELE M DPM
Subjt:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQLV+KLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH

XP_022970344.1 uncharacterized protein LOC111469338 [Cucurbita maxima]2.3e-6685.14Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        MTTQKQSWEAQQ Q       +   V   IGSP +EDQEEE+SRSALALFRAKEEEIERKKMEMREK+E RLGRAEEATKRLAEIREELEGMTDPMRKEV
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH
        S IRKKIDLVNKELKPLG+TCQKKEREYKEVL+L NEKNKEKSQLV+KLMELVNESEKLRMKKLEELS NIDILH
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH

XP_038893849.1 uncharacterized protein LOC120082661 [Benincasa hispida]1.7e-7493.85Show/hide
Query:  MTTQKQSWEA---QQMQRVKNSG-MISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPM
        MTT KQSWEA   QQMQRVKNSG MISSNV N IGSP+KEDQEEEISRSALA+FRAKEEEIERKKMEMREK+EARLGRAEEATKRLAEIREELEGMTDPM
Subjt:  MTTQKQSWEA---QQMQRVKNSG-MISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLV+KLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH

TrEMBL top hitse value%identityAlignment
A0A0A0LY59 RAB6-interacting golgin6.6e-8098.86Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNG-IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNG IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREK+EARLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNG-IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

A0A1S3CFV6 RAB6-interacting golgin1.6e-8198.29Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREK+EARLGRAEEATKRLAEIREELEGMTDPMRKEV
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH
        SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH

A0A5D3CH78 RAB6-interacting golgin1.6e-8198.29Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREK+EARLGRAEEATKRLAEIREELEGMTDPMRKEV
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH
        SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH

A0A6J1CNF1 RAB6-interacting golgin2.5e-7188.83Show/hide
Query:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPM
        MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+K+EARLGRAEEATKRLAEIREELE M DPM
Subjt:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQLV+KLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH

A0A6J1I589 RAB6-interacting golgin1.1e-6685.14Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        MTTQKQSWEAQQ Q       +   V   IGSP +EDQEEE+SRSALALFRAKEEEIERKKMEMREK+E RLGRAEEATKRLAEIREELEGMTDPMRKEV
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH
        S IRKKIDLVNKELKPLG+TCQKKEREYKEVL+L NEKNKEKSQLV+KLMELVNESEKLRMKKLEELS NIDILH
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)7.1e-5062.5Show/hide
Query:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMR
        M T +Q  E  Q   +QR+K+SG IS N     GSP+ +++EEE+S+SA ALF+AKE+EIER+KME++++++ +LG AEEAT+RLAEIREELE +TDPMR
Subjt:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDI
        KE+S IRK++D +N+ELKPLG +CQ+KERE+KE L+ +NEKNKEK+  VSKL+ELV ESEKLRM KLEELSK+I+I
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDI

AT2G36410.2 Family of unknown function (DUF662)5.3e-4562.72Show/hide
Query:  QKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFI
        Q QS    Q Q+  N  ++ +   +      +ED  EE++RSAL+ FRAKE+EIE+++ME+RE+++A+LGR E+ TKRL+ IREELE M DPMRKEVS +
Subjt:  QKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFI

Query:  RKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID
        RKKID VNKELKPLG T QKKEREYKE LD FNEKN+EK QL++KLMELV ESEKLRM KLEELSK+I+
Subjt:  RKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID

AT3G09980.1 Family of unknown function (DUF662)7.8e-4974.64Show/hide
Query:  QEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE
        ++EE+SR+AL+ FRAKEEEIE+KKME+RE+++A+LGR EE TKRLA IREELEG+ DPMRKEV+ +RKKID VNKELKPLG T QKKEREYKE L+ FNE
Subjt:  QEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE

Query:  KNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH
        KN+EK QL+++LMELV ESEK+RMKKLEELSKNID +H
Subjt:  KNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH

AT3G52920.1 Family of unknown function (DUF662)1.5e-4471.01Show/hide
Query:  QEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE
        ++EE++RSAL+ FRAKE+EIE++KME+RE+++A+LGR EE T+RLA IREELE M DPMRKEV+++RKKID VNKELKPLG T QKKEREYKE LD FNE
Subjt:  QEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE

Query:  KNKEKSQLVSKLME---LVNESEKLRMKKLEELSKNID
        KN+EK QL++KLME   LV ESEKLR+KKL+ELS++ID
Subjt:  KNKEKSQLVSKLME---LVNESEKLRMKKLEELSKNID

AT3G52920.2 Family of unknown function (DUF662)3.6e-4672.59Show/hide
Query:  QEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE
        ++EE++RSAL+ FRAKE+EIE++KME+RE+++A+LGR EE T+RLA IREELE M DPMRKEV+++RKKID VNKELKPLG T QKKEREYKE LD FNE
Subjt:  QEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE

Query:  KNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID
        KN+EK QL++KLMELV ESEKLR+KKL+ELS++ID
Subjt:  KNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGAATTGGGAGTCCGTTGAAGGAGGA
TCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATCGAGAGGAAGAAGATGGAGATGAGGGAGAAGTTGGAAGCTCGCCTTGGAC
GAGCTGAAGAAGCTACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGATTTGGTG
AACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTGTTGGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAACTGGTATC
CAAACTAATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGAATTGGGAGTCCGTTGAAGGAGGA
TCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATCGAGAGGAAGAAGATGGAGATGAGGGAGAAGTTGGAAGCTCGCCTTGGAC
GAGCTGAAGAAGCTACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGATTTGGTG
AACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTGTTGGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAACTGGTATC
CAAACTAATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTTCATTAA
Protein sequenceShow/hide protein sequence
MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKLEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLV
NKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILH