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PI0019149 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019149
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr01:12945314..12945854
RNA-Seq ExpressionPI0019149
SyntenyPI0019149
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019557 - Aminotransferase-like, plant mobile domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052363.1 hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]1.0e-6679.87Show/hide
Query:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF
        SI    RNDR   SKNDSQ+TIGSWISFWYLG KSYDKPTT+KQKKA RSKS QNP+GS+I++REWS RE+M F ELGIRD  KDETYLAAFLSCWLC+F
Subjt:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF

Query:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
        VFPQKGSFL PGVF++ASLM  GTIYSLAVP+LANIYHGLGLIT+ASNPI RM+FHFPM
Subjt:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]3.8e-6679.87Show/hide
Query:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF
        SI    RNDR   SKNDSQ+TIGSWISFWYLG KSYDKPTT+KQKKA RSKS QNPDGS+I++REWS RE+M F ELGIRD  KDETYLAAFLSCWLC+F
Subjt:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF

Query:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
        VFPQKGSFL  GVF++ASLM  GTIYSLAVP+LANIYHGLGLIT+ASNPI RM+FHFPM
Subjt:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]3.2e-6578.62Show/hide
Query:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF
        SI    RNDR   SKNDSQ+TIGSWISFWYLG KSYDKP T+KQKKA RSKS QNPDGS+I++REWS RE+M F ELGIRD  KDETYLAAFLSCWLC+F
Subjt:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF

Query:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
        VFP+KGSFL P VF++ASLM  GTIYSLAVP+LANIYHGLGLIT+ASNPI RM+FHFPM
Subjt:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]3.8e-6679.25Show/hide
Query:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF
        SI    RNDR T SKNDSQ+TIGSWISFWYLG +SYDKPTT+KQK A RSKS QNPDGS+I++REWS RE+M F ELGI+D  KDETYLAAFLSCWLC+F
Subjt:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF

Query:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
        VFPQKGSFL PGVF+ ASLMT GTIYSLAVP+LANIYHGLGLIT+ASNP  RM+FHFPM
Subjt:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]2.6e-6780.5Show/hide
Query:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF
        SI    RNDR   SKNDSQ+TIGSWISFWYLG KSYDKPTT+KQKKA RSKS QNPDGS+I++REWS RE+M F ELGIRD  KDETYLAAFLSCWLC+F
Subjt:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF

Query:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
        VFPQKGSFL PGVF++ASLM  GTIYSLAVP+LANIYHGLGLIT+ASNPI RM+FHFPM
Subjt:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
TrEMBL top hitse value%identityAlignment
A0A5A7U8X8 PMD domain-containing protein4.8e-6779.87Show/hide
Query:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF
        SI    RNDR   SKNDSQ+TIGSWISFWYLG KSYDKPTT+KQKKA RSKS QNP+GS+I++REWS RE+M F ELGIRD  KDETYLAAFLSCWLC+F
Subjt:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF

Query:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
        VFPQKGSFL PGVF++ASLM  GTIYSLAVP+LANIYHGLGLIT+ASNPI RM+FHFPM
Subjt:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
A0A5A7UGW6 PMD domain-containing protein1.8e-6679.87Show/hide
Query:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF
        SI    RNDR   SKNDSQ+TIGSWISFWYLG KSYDKPTT+KQKKA RSKS QNPDGS+I++REWS RE+M F ELGIRD  KDETYLAAFLSCWLC+F
Subjt:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF

Query:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
        VFPQKGSFL  GVF++ASLM  GTIYSLAVP+LANIYHGLGLIT+ASNPI RM+FHFPM
Subjt:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
A0A5A7UVI5 PMD domain-containing protein1.6e-6578.62Show/hide
Query:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF
        SI    RNDR   SKNDSQ+TIGSWISFWYLG KSYDKP T+KQKKA RSKS QNPDGS+I++REWS RE+M F ELGIRD  KDETYLAAFLSCWLC+F
Subjt:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF

Query:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
        VFP+KGSFL P VF++ASLM  GTIYSLAVP+LANIYHGLGLIT+ASNPI RM+FHFPM
Subjt:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
A0A5A7VHW8 PMD domain-containing protein1.8e-6679.25Show/hide
Query:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF
        SI    RNDR T SKNDSQ+TIGSWISFWYLG +SYDKPTT+KQK A RSKS QNPDGS+I++REWS RE+M F ELGI+D  KDETYLAAFLSCWLC+F
Subjt:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF

Query:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
        VFPQKGSFL PGVF+ ASLMT GTIYSLAVP+LANIYHGLGLIT+ASNP  RM+FHFPM
Subjt:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
A0A5D3DCE5 PMD domain-containing protein1.3e-6780.5Show/hide
Query:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF
        SI    RNDR   SKNDSQ+TIGSWISFWYLG KSYDKPTT+KQKKA RSKS QNPDGS+I++REWS RE+M F ELGIRD  KDETYLAAFLSCWLC+F
Subjt:  SISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIF

Query:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
        VFPQKGSFL PGVF++ASLM  GTIYSLAVP+LANIYHGLGLIT+ASNPI RM+FHFPM
Subjt:  VFPQKGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCCGACGACATGTCAATATCTATTCCAGGCAGGAATGACCGCATGACACTGTCGAAGAATGACTCTCAAATCACTATTGGTTCCTGGATTTCATTCTGGTATCT
TGGGCCTAAAAGCTATGATAAGCCAACTACAAAAAAGCAGAAGAAGGCGCCACGTTCCAAATCCATCCAAAATCCTGATGGTTCGAGGATTGAGTCTCGAGAATGGTCTA
TCAGAGAAAACATGTTCTTTGAAGAACTCGGGATAAGGGATGGTTCGAAAGATGAAACATATTTAGCTGCTTTTCTATCTTGTTGGTTGTGCATTTTCGTGTTTCCGCAA
AAGGGCTCATTTCTTTGTCCTGGGGTTTTCAAGATCGCAAGCTTAATGACCGATGGGACTATCTATAGTCTTGCAGTCCCAATTTTAGCAAATATATATCATGGACTAGG
TTTGATAACTGAAGCCTCGAATCCAATTAGACGCATGAATTTTCATTTTCCCATGCTAACGTCCATGGCTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCCGACGACATGTCAATATCTATTCCAGGCAGGAATGACCGCATGACACTGTCGAAGAATGACTCTCAAATCACTATTGGTTCCTGGATTTCATTCTGGTATCT
TGGGCCTAAAAGCTATGATAAGCCAACTACAAAAAAGCAGAAGAAGGCGCCACGTTCCAAATCCATCCAAAATCCTGATGGTTCGAGGATTGAGTCTCGAGAATGGTCTA
TCAGAGAAAACATGTTCTTTGAAGAACTCGGGATAAGGGATGGTTCGAAAGATGAAACATATTTAGCTGCTTTTCTATCTTGTTGGTTGTGCATTTTCGTGTTTCCGCAA
AAGGGCTCATTTCTTTGTCCTGGGGTTTTCAAGATCGCAAGCTTAATGACCGATGGGACTATCTATAGTCTTGCAGTCCCAATTTTAGCAAATATATATCATGGACTAGG
TTTGATAACTGAAGCCTCGAATCCAATTAGACGCATGAATTTTCATTTTCCCATGCTAACGTCCATGGCTGGTTAG
Protein sequenceShow/hide protein sequence
MSPDDMSISIPGRNDRMTLSKNDSQITIGSWISFWYLGPKSYDKPTTKKQKKAPRSKSIQNPDGSRIESREWSIRENMFFEELGIRDGSKDETYLAAFLSCWLCIFVFPQ
KGSFLCPGVFKIASLMTDGTIYSLAVPILANIYHGLGLITEASNPIRRMNFHFPMLTSMAG