; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019208 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019208
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr02:16135113..16137834
RNA-Seq ExpressionPI0019208
SyntenyPI0019208
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.1e-5452.24Show/hide
Query:  TLRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ-
        TL++FGEL  L ANL K ++FV G   E A+ LA ++GF LG LPVRYL +PL++GRLR SDCAPLIQRITSR  SW+ARVLS+ GR QLVRSV RS Q 
Subjt:  TLRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ-

Query:  -------------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDG
                                                               VE YILK +SL  VDSGV RSW LRAILR RD  + HV +EVGDG
Subjt:  -------------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDG

Query:  RRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE
          CR+WLDPWL G  I+ Q+GERV+Y+AAS REARLSEFIG DGE
Subjt:  RRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE

KAA0057642.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-5352.1Show/hide
Query:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---
        ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+DC PLIQRITSR  S SARVLS+ GRLQLV SVL S Q   
Subjt:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---

Query:  ------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWL
                                                        VE Y+LKGRSL  VDS VGRSW LRAILR ++  ++HV M+VG+G RCR+WL
Subjt:  ------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWL

Query:  DPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE
        DPWL  GAI+ Q+GERV+Y+AAS REA LS FIG DGE
Subjt:  DPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE

TYK19523.1 reverse transcriptase [Cucumis melo var. makuwa]3.7e-5351.68Show/hide
Query:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---
        ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+DC PLIQRITSR  S SARVLS+ GRLQLV SVL S Q   
Subjt:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---

Query:  ------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWL
                                                        VE Y+LKGRSL  VDS VGRSW LRAILR ++  ++HV M+VG+G RCR+WL
Subjt:  ------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWL

Query:  DPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE
        DPWL  GAI+ ++GERV+Y+AAS REA LS FIG DGE
Subjt:  DPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE

XP_008452126.1 PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo]2.8e-5351.9Show/hide
Query:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---
        ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+DC PLIQRITSR  S SARVLS+ GRLQLV SVL S Q   
Subjt:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---

Query:  -----------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLD
                                                       VE Y+LKGRSL  VDS VGRSW LRAILR ++  ++HV M+VG+G RCR+WLD
Subjt:  -----------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLD

Query:  PWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE
        PWL  GAI+ ++GERV+Y+AAS REA LS FIG DGE
Subjt:  PWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE

XP_031740402.1 uncharacterized protein LOC116403409 [Cucumis sativus]1.1e-5245.62Show/hide
Query:  KCTLRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSF
        K T+++FGELS L ANL KS +F+ GV+   A+ LA ++GF++G LPVRYLG+PL+S RLRSSDC PLIQRITSR  SWSARVLS+ GRLQLVRSVLRS 
Subjt:  KCTLRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSF

Query:  Q-----------------------------------------------------------------------------------VEFYILKGRSLGFVDS
        Q                                                                                   VE YILKGRSL  +D+
Subjt:  Q-----------------------------------------------------------------------------------VEFYILKGRSLGFVDS

Query:  GVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE
        GV RSW  R ILR RDI ++HV MEVG+GR+CR+WL PW+ GG II Q GERV+Y+A S  +ARL +F+G DG+
Subjt:  GVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE

TrEMBL top hitse value%identityAlignment
A0A1S3BSI8 uncharacterized protein LOC1034932251.4e-5351.9Show/hide
Query:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---
        ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+DC PLIQRITSR  S SARVLS+ GRLQLV SVL S Q   
Subjt:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---

Query:  -----------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLD
                                                       VE Y+LKGRSL  VDS VGRSW LRAILR ++  ++HV M+VG+G RCR+WLD
Subjt:  -----------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLD

Query:  PWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE
        PWL  GAI+ ++GERV+Y+AAS REA LS FIG DGE
Subjt:  PWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE

A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein5.6e-5552.24Show/hide
Query:  TLRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ-
        TL++FGEL  L ANL K ++FV G   E A+ LA ++GF LG LPVRYL +PL++GRLR SDCAPLIQRITSR  SW+ARVLS+ GR QLVRSV RS Q 
Subjt:  TLRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ-

Query:  -------------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDG
                                                               VE YILK +SL  VDSGV RSW LRAILR RD  + HV +EVGDG
Subjt:  -------------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDG

Query:  RRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE
          CR+WLDPWL G  I+ Q+GERV+Y+AAS REARLSEFIG DGE
Subjt:  RRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE

A0A5A7UP65 Reverse transcriptase6.1e-5452.1Show/hide
Query:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---
        ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+DC PLIQRITSR  S SARVLS+ GRLQLV SVL S Q   
Subjt:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---

Query:  ------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWL
                                                        VE Y+LKGRSL  VDS VGRSW LRAILR ++  ++HV M+VG+G RCR+WL
Subjt:  ------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWL

Query:  DPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE
        DPWL  GAI+ Q+GERV+Y+AAS REA LS FIG DGE
Subjt:  DPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE

A0A5A7V3Z0 Reverse transcriptase domain-containing protein1.7e-4845.76Show/hide
Query:  LRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ--
        L++FGELS L AN  KS++FV GV+ E A+ LA  +GF  G L VRYLG+PL++GRLRS+D APLIQRITSR  SW+ARVLS+ GRLQLV SVLRSFQ  
Subjt:  LRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ--

Query:  ---------------------------------------------------------------------------------VEFYILKGRSLGFVDSGVG
                                                                                         VE YILKGRSL  VDS VG
Subjt:  ---------------------------------------------------------------------------------VEFYILKGRSLGFVDSGVG

Query:  RSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE
        +SW LRAILR R+  +  V M+VG+G   R+WLDPWL  GAI+ Q+GERV+Y+AAS R+ARLS+FI  DGE
Subjt:  RSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE

A0A5D3D7P6 Reverse transcriptase1.8e-5351.68Show/hide
Query:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---
        ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+DC PLIQRITSR  S SARVLS+ GRLQLV SVL S Q   
Subjt:  RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---

Query:  ------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWL
                                                        VE Y+LKGRSL  VDS VGRSW LRAILR ++  ++HV M+VG+G RCR+WL
Subjt:  ------------------------------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWL

Query:  DPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE
        DPWL  GAI+ ++GERV+Y+AAS REA LS FIG DGE
Subjt:  DPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.4e-1244.74Show/hide
Query:  VTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRS
        + GV       +  S  FA G LPVRYLG+PL++ ++ +SD  PL+++I  R   W+AR LS+ GRLQL+ SV+ S
Subjt:  VTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTGTAGCCTTGGAACAACTCACTCAACAATTAAACCTGAGAAAGACATCATACCCAAAAAGATATCCACCAAAGTTTACACAACAACAACAACTAAAGCTTACAC
AAACTATACTTTTCTAAATCTTACAAGACATATACAACAAAACAAAACAGACTATAAGTACAACACCAACCACGTACTGGCAATTGATCTGGGAGCTTCCATTACCCTAA
GACAGTCTATCAGGCACCAAGAGCTCGGTCTCTATCTGGGAAGTGGAAAACATTTTGAAAGGTGGAGAAGAAGATGGAAAGAAAACAAATGCACTCTTCGTCAGTTTGGG
GAGTTATCGTGGTTGATTGCTAATTTGGAGAAGAGCACTATGTTTGTGACAGGGGTTGACATTGAGGCTGCTACTGTGTTGGCGGATAGTATAGGGTTTGCGCTGGGTAC
TCTGCCTGTTCGTTACTTGGGTGTTCCCTTAATCTCTGGTCGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGTTTTGGTCTTGGTCGGCTA
GAGTTTTATCCTACGTTGGTAGACTTCAGCTTGTGCGTTCGGTGTTGCGGAGTTTTCAGGTGGAGTTCTATATTCTAAAGGGGCGATCGTTGGGGTTTGTGGATAGTGGG
GTCGGTCGGTCTTGGAGTCTTCGTGCTATTCTGAGGCATCGTGATATCTTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGAAGGCGGTGTCGTATTTGGCTTGACCC
TTGGCTGCATGGAGGCGCGATCATTTGGCAAATGGGTGAAAGGGTGGTGTATAATGCTGCGAGTAGTAGGGAGGCTAGGTTATCTGAGTTCATTGGCTCGGATGGTGAGT
AG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTGTAGCCTTGGAACAACTCACTCAACAATTAAACCTGAGAAAGACATCATACCCAAAAAGATATCCACCAAAGTTTACACAACAACAACAACTAAAGCTTACAC
AAACTATACTTTTCTAAATCTTACAAGACATATACAACAAAACAAAACAGACTATAAGTACAACACCAACCACGTACTGGCAATTGATCTGGGAGCTTCCATTACCCTAA
GACAGTCTATCAGGCACCAAGAGCTCGGTCTCTATCTGGGAAGTGGAAAACATTTTGAAAGGTGGAGAAGAAGATGGAAAGAAAACAAATGCACTCTTCGTCAGTTTGGG
GAGTTATCGTGGTTGATTGCTAATTTGGAGAAGAGCACTATGTTTGTGACAGGGGTTGACATTGAGGCTGCTACTGTGTTGGCGGATAGTATAGGGTTTGCGCTGGGTAC
TCTGCCTGTTCGTTACTTGGGTGTTCCCTTAATCTCTGGTCGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGTTTTGGTCTTGGTCGGCTA
GAGTTTTATCCTACGTTGGTAGACTTCAGCTTGTGCGTTCGGTGTTGCGGAGTTTTCAGGTGGAGTTCTATATTCTAAAGGGGCGATCGTTGGGGTTTGTGGATAGTGGG
GTCGGTCGGTCTTGGAGTCTTCGTGCTATTCTGAGGCATCGTGATATCTTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGAAGGCGGTGTCGTATTTGGCTTGACCC
TTGGCTGCATGGAGGCGCGATCATTTGGCAAATGGGTGAAAGGGTGGTGTATAATGCTGCGAGTAGTAGGGAGGCTAGGTTATCTGAGTTCATTGGCTCGGATGGTGAGT
AG
Protein sequenceShow/hide protein sequence
MKCSLGTTHSTIKPEKDIIPKKISTKVYTTTTTKAYTNYTFLNLTRHIQQNKTDYKYNTNHVLAIDLGASITLRQSIRHQELGLYLGSGKHFERWRRRWKENKCTLRQFG
ELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQVEFYILKGRSLGFVDSG
VGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE