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PI0019231 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019231
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAlba domain-containing protein
Genome locationchr05:1185159..1186772
RNA-Seq ExpressionPI0019231
SyntenyPI0019231
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139317.1 uncharacterized protein At2g34160 [Cucumis sativus]3.4e-5996.95Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVN+INLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLA+EKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGDADEQS
        EILLGKTENFDELMAAAAEERGEIG+ADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGDADEQS

XP_008457716.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo]5.3e-6098.47Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVN+INLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGDADEQS
        EILLGKTENFDELMAAAAEERGEIGDADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGDADEQS

XP_022143001.1 uncharacterized protein At2g34160-like [Momordica charantia]7.9e-5691.6Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVN++NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH EVELSALGMAIATVVTVAEILKNNGL VEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGDADEQS
        EILLGKTENFDELMAAAAEERG+ GD DEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGDADEQS

XP_023547053.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo]4.6e-5693.13Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV++INL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGLAVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGDADEQS
        EILLGKTENFDELMAAAAEER E GDADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGDADEQS

XP_038890892.1 uncharacterized protein At2g34160-like [Benincasa hispida]4.2e-5793.28Show/hide
Query:  MEEIVEGVNTINLSS---DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQK
        MEEIVEGVN++NLSS   DS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLA+EKKIATSTVDIKDDSRGRPVQK
Subjt:  MEEIVEGVNTINLSS---DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQK

Query:  AKIEILLGKTENFDELMAAAAEERGEIGDADEQS
        AKIEILLGKT+NFDELMAAAAEERGEIGDADEQS
Subjt:  AKIEILLGKTENFDELMAAAAEERGEIGDADEQS

TrEMBL top hitse value%identityAlignment
A0A1S3C651 uncharacterized protein At2g34160-like2.6e-6098.47Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVN+INLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGDADEQS
        EILLGKTENFDELMAAAAEERGEIGDADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGDADEQS

A0A5D3BH52 DNA/RNA-binding protein Alba-like protein2.6e-6098.47Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVN+INLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGDADEQS
        EILLGKTENFDELMAAAAEERGEIGDADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGDADEQS

A0A6J1CNW3 uncharacterized protein At2g34160-like3.8e-5691.6Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVN++NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH EVELSALGMAIATVVTVAEILKNNGL VEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGDADEQS
        EILLGKTENFDELMAAAAEERG+ GD DEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGDADEQS

A0A6J1G312 uncharacterized protein At2g34160-like5.0e-5692.37Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+++NL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGLAVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGDADEQS
        EILLGKTENFDELMAAAAEER E GDADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGDADEQS

A0A6J1KJN4 uncharacterized protein At2g34160-like1.5e-5591.6Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+++NL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGLAVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGDADEQS
        EI LGKTENFDELMAAAAEER E GDADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGDADEQS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341601.4e-4783.47Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI +GVN +NL++DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTV EILKNNG AVEKKI TSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEER
        EI L K+E FDELMAAA EE+
Subjt:  EILLGKTENFDELMAAAAEER

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein5.3e-5081.68Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI EGVN +NL+ D+ KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTVAEILKNNG AVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGDADEQS
        EI L K+E FDELMAAA EE+ E  +A EQ+
Subjt:  EILLGKTENFDELMAAAAEERGEIGDADEQS

AT2G34160.1 Alba DNA/RNA-binding protein1.0e-4883.47Show/hide
Query:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI +GVN +NL++DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTV EILKNNG AVEKKI TSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEER
        EI L K+E FDELMAAA EE+
Subjt:  EILLGKTENFDELMAAAAEER

AT3G04620.1 Alba DNA/RNA-binding protein5.1e-3768.47Show/hide
Query:  IVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEIL
        +     T   + ++ KKNRIQVSNTKKPLFFYVNLAKRY+QQH EVELSALGMAI TVVT++EILKNNGLA EKK+ TSTV +KD+++G+ VQKAKIEI+
Subjt:  IVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEIL

Query:  LGKTENFDELM
        LGK++ FD L+
Subjt:  LGKTENFDELM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAATTGTAGAAGGCGTCAACACCATCAACTTGAGTTCCGATTCGTTTAAGAAGAATCGGATTCAAGTCTCCAACACCAAGAAACCCTTGTTCTTCTATGTCAA
TCTCGCTAAGAGGTACATGCAGCAGCATGAAGAGGTTGAACTTTCTGCTCTGGGAATGGCAATTGCCACAGTTGTTACAGTTGCTGAAATTTTGAAAAACAATGGATTGG
CTGTTGAGAAGAAGATTGCAACCTCAACTGTTGATATCAAGGATGACTCAAGAGGAAGACCTGTCCAGAAGGCTAAGATTGAGATATTGCTGGGTAAAACCGAAAACTTT
GATGAATTGATGGCTGCTGCTGCTGAGGAAAGGGGGGAGATAGGCGATGCAGACGAGCAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAATTGTAGAAGGCGTCAACACCATCAACTTGAGTTCCGATTCGTTTAAGAAGAATCGGATTCAAGTCTCCAACACCAAGAAACCCTTGTTCTTCTATGTCAA
TCTCGCTAAGAGGTACATGCAGCAGCATGAAGAGGTTGAACTTTCTGCTCTGGGAATGGCAATTGCCACAGTTGTTACAGTTGCTGAAATTTTGAAAAACAATGGATTGG
CTGTTGAGAAGAAGATTGCAACCTCAACTGTTGATATCAAGGATGACTCAAGAGGAAGACCTGTCCAGAAGGCTAAGATTGAGATATTGCTGGGTAAAACCGAAAACTTT
GATGAATTGATGGCTGCTGCTGCTGAGGAAAGGGGGGAGATAGGCGATGCAGACGAGCAGAGTTAA
Protein sequenceShow/hide protein sequence
MEEIVEGVNTINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENF
DELMAAAAEERGEIGDADEQS