; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019243 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019243
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionnuclear transport factor 2
Genome locationchr12:4116668..4118111
RNA-Seq ExpressionPI0019243
SyntenyPI0019243
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
InterPro domainsIPR002075 - Nuclear transport factor 2
IPR018222 - Nuclear transport factor 2, eukaryote
IPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153658.1 nuclear transport factor 2B [Cucumis sativus]2.1e-6196Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS
        MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGV DIS+KLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIE+PEEEH LRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS

Query:  QMFHLVPSPQGNLFVQNDIFRLNYG
        QMFHLVPSP+GNLFVQNDIFRLNYG
Subjt:  QMFHLVPSPQGNLFVQNDIFRLNYG

XP_008441397.1 PREDICTED: nuclear transport factor 2 [Cucumis melo]2.5e-5994.35Show/hide
Query:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQ
        EE+GDIIGKAFVEHYY LFDNERASLSSLYQPDSMLTFEGQQILGV+DISTKLQQLPFERCRHVVSTIDTQPSSV GSILIFVSGSIE+PEEEH LR+SQ
Subjt:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQ

Query:  MFHLVPSPQGNLFVQNDIFRLNYG
        MFHLVPSPQGNLFVQNDIFRLNYG
Subjt:  MFHLVPSPQGNLFVQNDIFRLNYG

XP_022933198.1 nuclear transport factor 2B [Cucurbita moschata]2.6e-5687.2Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS
        MEEE DI+GKAFVEHYYQLFDNER SLS+LYQPDSMLTFEGQQILGVDDIS++LQQLPFERCRHVVST+DTQPS+V GSILIFVSGS+E+P+EEH LRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS

Query:  QMFHLVPSPQGNLFVQNDIFRLNYG
        QMFHLVP+ QGNL VQNDIFRLNYG
Subjt:  QMFHLVPSPQGNLFVQNDIFRLNYG

XP_023519037.1 nuclear transport factor 2B [Cucurbita pepo subsp. pepo]2.0e-5688Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS
        MEEE DI+GKAFVEHYYQLFDNER SLS+LYQPDSMLTFEGQQILGVDDIS++LQQLPFERCRHVVST+DTQPS+V GSILIFVSGS+E+PEEEH LRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS

Query:  QMFHLVPSPQGNLFVQNDIFRLNYG
        QMFHLVP+ QGNL VQNDIFRLNYG
Subjt:  QMFHLVPSPQGNLFVQNDIFRLNYG

XP_038895004.1 nuclear transport factor 2B [Benincasa hispida]5.6e-5992.8Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS
        MEEE DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDIS+KLQQLPFER RH+VSTIDTQPSSV GS LIFVSGS+E+PEEEHQLRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS

Query:  QMFHLVPSPQGNLFVQNDIFRLNYG
        QMFHLVPSPQGNLFVQN+IFRLNYG
Subjt:  QMFHLVPSPQGNLFVQNDIFRLNYG

TrEMBL top hitse value%identityAlignment
A0A0A0LUU9 NTF2 domain-containing protein9.9e-6296Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS
        MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGV DIS+KLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIE+PEEEH LRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS

Query:  QMFHLVPSPQGNLFVQNDIFRLNYG
        QMFHLVPSP+GNLFVQNDIFRLNYG
Subjt:  QMFHLVPSPQGNLFVQNDIFRLNYG

A0A1S3B3B7 nuclear transport factor 21.2e-5994.35Show/hide
Query:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQ
        EE+GDIIGKAFVEHYY LFDNERASLSSLYQPDSMLTFEGQQILGV+DISTKLQQLPFERCRHVVSTIDTQPSSV GSILIFVSGSIE+PEEEH LR+SQ
Subjt:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQ

Query:  MFHLVPSPQGNLFVQNDIFRLNYG
        MFHLVPSPQGNLFVQNDIFRLNYG
Subjt:  MFHLVPSPQGNLFVQNDIFRLNYG

A0A6J1CEC9 nuclear transport factor 29.0e-5583.2Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS
        MEEE +++G+AFVEHYYQLFDNERAS+SSLYQP+SMLTFEGQ+ILGVDDIS++LQQLPFERCRHVVST+DTQPS+  GS+LIFVSGS+E+P EEHQLRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS

Query:  QMFHLVPSPQGNLFVQNDIFRLNYG
        QMFHLVP+ QG+LFVQNDIFRLNYG
Subjt:  QMFHLVPSPQGNLFVQNDIFRLNYG

A0A6J1F427 nuclear transport factor 2B1.3e-5687.2Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS
        MEEE DI+GKAFVEHYYQLFDNER SLS+LYQPDSMLTFEGQQILGVDDIS++LQQLPFERCRHVVST+DTQPS+V GSILIFVSGS+E+P+EEH LRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS

Query:  QMFHLVPSPQGNLFVQNDIFRLNYG
        QMFHLVP+ QGNL VQNDIFRLNYG
Subjt:  QMFHLVPSPQGNLFVQNDIFRLNYG

A0A6J1KQ62 nuclear transport factor 2B4.8e-5686.4Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS
        MEEE DI+GKAFVEHYYQLFDNER SLS+LYQPDSMLTFEGQQILGV DIS++LQQLPFERCRHVVST+DTQPS+V GSILIFVSGS+E+PEEEH LRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS

Query:  QMFHLVPSPQGNLFVQNDIFRLNYG
        QMFHLVP+ QGNL +QNDIFRLNYG
Subjt:  QMFHLVPSPQGNLFVQNDIFRLNYG

SwissProt top hitse value%identityAlignment
Q10100 Nuclear transport factor 24.5e-2750Show/hide
Query:  FVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHLVPSPQG
        F + YYQ FD++R+ LSSLY+ +SML+FEG Q+ G   I  KL  LPF+R +H +ST+D QP+   GS+++ V+G + + EE+   R+SQ+FHLV +  G
Subjt:  FVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHLVPSPQG

Query:  NLFVQNDIFRLNYG
        N +V ND+FRLNYG
Subjt:  NLFVQNDIFRLNYG

Q9C7F5 Nuclear transport factor 2B6.3e-3758.82Show/hide
Query:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHL
        D + KAFVEHYY  FD  R  L+ LYQ  SMLTFEGQ+I GV  I  KL  LPF++C+H +ST+D QPS     +L+FVSG++++  EEH L+FSQMFHL
Subjt:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHL

Query:  VPSPQGNLFVQNDIFRLNY
        +P+PQG+ +V NDIFRLNY
Subjt:  VPSPQGNLFVQNDIFRLNY

Q9FZK4 Nuclear transport factor 2A8.4e-3457.98Show/hide
Query:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHL
        D + KAFVEHYY  FD  R  L SLYQ  SMLTFEGQ+I G  +I  KL  LPF++C+H ++T+D QPS   G +L+FVSG++++  E+H L+FSQMFHL
Subjt:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHL

Query:  VPSPQGNLFVQNDIFRLNY
        + S QGN +V NDIFRLNY
Subjt:  VPSPQGNLFVQNDIFRLNY

Q9P926 Nuclear transport factor 25.0e-2645.16Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS
        M  + + +   F   YY  FD++R+ L +LY+ +SMLTFE  Q+ G  DI  KL  LPF++  H +ST+D QP+S +G IL+ V+G + + EE++  R+S
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFS

Query:  QMFHLVPSPQGNLFVQNDIFRLNY
        Q+FHL+P   G+ +V NDIFRLNY
Subjt:  QMFHLVPSPQGNLFVQNDIFRLNY

Q9XJ54 Nuclear transport factor 21.3e-3457.38Show/hide
Query:  EGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMF
        + D + KAFVEHYY+ FD  R +L SLYQ  SMLTFEGQQ LG   I+ KL  LPF +C H ++T+D QPS   G +L+FVSGS+    +EH L+FSQMF
Subjt:  EGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMF

Query:  HLVPSPQGNLFVQNDIFRLNYG
         L+P+  GN +VQND+FRLNYG
Subjt:  HLVPSPQGNLFVQNDIFRLNYG

Arabidopsis top hitse value%identityAlignment
AT1G11570.1 NTF2-like8.1e-3261.11Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVH---GSILIFVSGSIEMPEEEHQL
        +EEE   +  AFV HYY LFDN+R+SLSSLY P S+LTFEGQ I GVD+IS KL+QLPF++C H++ST+D+QPSS+    G IL+FVSGSI++  E+H L
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVH---GSILIFVSGSIEMPEEEHQL

Query:  RFSQMFHL
        RFSQ++ L
Subjt:  RFSQMFHL

AT1G11570.2 NTF2-like5.1e-4263.28Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVH---GSILIFVSGSIEMPEEEHQL
        +EEE   +  AFV HYY LFDN+R+SLSSLY P S+LTFEGQ I GVD+IS KL+QLPF++C H++ST+D+QPSS+    G IL+FVSGSI++  E+H L
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVH---GSILIFVSGSIEMPEEEHQL

Query:  RFSQMFHLVPSPQGNLFVQNDIFRLNYG
        RFSQ FHL+P  QG+ FVQN++FRLNYG
Subjt:  RFSQMFHLVPSPQGNLFVQNDIFRLNYG

AT1G27310.1 nuclear transport factor 2A6.0e-3557.98Show/hide
Query:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHL
        D + KAFVEHYY  FD  R  L SLYQ  SMLTFEGQ+I G  +I  KL  LPF++C+H ++T+D QPS   G +L+FVSG++++  E+H L+FSQMFHL
Subjt:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHL

Query:  VPSPQGNLFVQNDIFRLNY
        + S QGN +V NDIFRLNY
Subjt:  VPSPQGNLFVQNDIFRLNY

AT1G27970.1 nuclear transport factor 2B4.4e-3858.82Show/hide
Query:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHL
        D + KAFVEHYY  FD  R  L+ LYQ  SMLTFEGQ+I GV  I  KL  LPF++C+H +ST+D QPS     +L+FVSG++++  EEH L+FSQMFHL
Subjt:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHL

Query:  VPSPQGNLFVQNDIFRLNY
        +P+PQG+ +V NDIFRLNY
Subjt:  VPSPQGNLFVQNDIFRLNY

AT1G27970.2 nuclear transport factor 2B1.6e-3557.39Show/hide
Query:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHL
        D + KAFVEHYY  FD  R  L+ LYQ  SMLTFEGQ+I GV  I  KL  LPF++C+H +ST+D QPS     +L+FVSG++++  EEH L+FSQMFHL
Subjt:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHL

Query:  VPSPQGNLFVQNDIF
        +P+PQG+ +V NDIF
Subjt:  VPSPQGNLFVQNDIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAGGGTGATATAATTGGGAAGGCTTTTGTGGAACATTATTACCAATTGTTTGATAATGAAAGAGCTTCTCTTTCATCTTTGTATCAACCTGACTCAATGCT
CACTTTTGAAGGGCAACAAATTTTAGGTGTTGATGACATCTCCACAAAGCTTCAGCAATTGCCATTTGAGCGTTGTCGACATGTCGTTAGCACCATCGACACGCAGCCCT
CCTCCGTCCATGGCTCCATCCTCATCTTCGTCAGCGGTAGCATTGAGATGCCTGAAGAAGAACACCAACTCAGATTCAGCCAGATGTTTCACTTAGTACCTTCACCACAA
GGCAACCTTTTTGTTCAGAATGACATTTTTCGCCTCAATTATGGTTAG
mRNA sequenceShow/hide mRNA sequence
AATTACATCTCTTCCTACATGCACTTCAAAAAAAAAAAAAAACAAACAACCAACATTATTATATAATCACTAGTAGAGAAAAAAAAAAGGGTTTATATTATTGTTGGTTT
TGTTGAAGAGAATTAGAGAGATGGAAGAAGAGGGTGATATAATTGGGAAGGCTTTTGTGGAACATTATTACCAATTGTTTGATAATGAAAGAGCTTCTCTTTCATCTTTG
TATCAACCTGACTCAATGCTCACTTTTGAAGGGCAACAAATTTTAGGTGTTGATGACATCTCCACAAAGCTTCAGCAATTGCCATTTGAGCGTTGTCGACATGTCGTTAG
CACCATCGACACGCAGCCCTCCTCCGTCCATGGCTCCATCCTCATCTTCGTCAGCGGTAGCATTGAGATGCCTGAAGAAGAACACCAACTCAGATTCAGCCAGATGTTTC
ACTTAGTACCTTCACCACAAGGCAACCTTTTTGTTCAGAATGACATTTTTCGCCTCAATTATGGTTAGTTCGTTCAGGATTTCTTTGTGCCTATATTTGAACACACAAAT
GTTATCATTTCGTGGATTTGATTTGTAATTTCCTTCTTATCTAAATATACAAAATTTCTTATTTA
Protein sequenceShow/hide protein sequence
MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISTKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEMPEEEHQLRFSQMFHLVPSPQ
GNLFVQNDIFRLNYG