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PI0019249 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019249
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransducin/WD40 repeat-like superfamily protein
Genome locationchr02:22857986..22863151
RNA-Seq ExpressionPI0019249
SyntenyPI0019249
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043115.1 periodic tryptophan protein 1-like protein [Cucumis melo var. makuwa]2.2e-0976.74Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR
        VKLWDLSNNEP CVASTN K GA+  VSFS+DCPFLLAIG  +
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR

TYJ96216.1 periodic tryptophan protein 1-like protein [Cucumis melo var. makuwa]2.2e-0976.74Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR
        VKLWDLSNNEP CVASTN K GA+  VSFS+DCPFLLAIG  +
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR

XP_008452352.1 PREDICTED: periodic tryptophan protein 1 homolog [Cucumis melo]2.2e-0976.74Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR
        VKLWDLSNNEP CVASTN K GA+  VSFS+DCPFLLAIG  +
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR

XP_022134698.1 uncharacterized WD repeat-containing protein C17D11.16 [Momordica charantia]2.2e-0976.74Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR
        VKLWDLSNNEP CVASTN K GA+  VSFS+DCPFLLAIG  +
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR

XP_038890811.1 uncharacterized WD repeat-containing protein C17D11.16-like [Benincasa hispida]2.6e-1079.07Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR
        VKLWDLSNNEP CVASTNLKVGA+  V+FS+DCPFLLAIG  +
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR

TrEMBL top hitse value%identityAlignment
A0A1S3BUS3 periodic tryptophan protein 1 homolog1.1e-0976.74Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR
        VKLWDLSNNEP CVASTN K GA+  VSFS+DCPFLLAIG  +
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR

A0A251V914 Putative transducin/WD40 repeat-like superfamily protein1.8e-0971.11Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQREN
        VKLWDLSNN+P CVAS NLK GA+  +SFS+DCPFLLAI   R N
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQREN

A0A5A7TNX2 Periodic tryptophan protein 1-like protein1.1e-0976.74Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR
        VKLWDLSNNEP CVASTN K GA+  VSFS+DCPFLLAIG  +
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR

A0A5D3BBF1 Periodic tryptophan protein 1-like protein1.1e-0976.74Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR
        VKLWDLSNNEP CVASTN K GA+  VSFS+DCPFLLAIG  +
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR

A0A6J1C2R2 uncharacterized WD repeat-containing protein C17D11.161.1e-0976.74Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR
        VKLWDLSNNEP CVASTN K GA+  VSFS+DCPFLLAIG  +
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18900.1 Transducin/WD40 repeat-like superfamily protein1.2e-0860Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIG
        VKLWDLSNNEP C+A+ N   G +  ++FS D PFLLA+G
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIG

AT4G18905.1 Transducin/WD40 repeat-like superfamily protein1.5e-0858.14Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR
        VKLWDLSNNEP C+A+     GA+  +SF+ D PFLLAIG  +
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR

AT4G18905.2 Transducin/WD40 repeat-like superfamily protein1.5e-0858.14Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR
        VKLWDLSNNEP C+A+     GA+  +SF+ D PFLLAIG  +
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQR

AT4G35370.1 Transducin/WD40 repeat-like superfamily protein3.4e-0860Show/hide
Query:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIG
        VKLWDLSNN+P  +A+     G +  VSFS DCPFLLA+G
Subjt:  VKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCATTAGAAAGATCTACATGCAACTGGATCTACTGACAAAATGCTCATTCGTTAAATTATGGGACTTGTCCAATAACGAACCTTTATGTGTGGCATCCACCAACCT
TAAAGTAGGTGCTATGCTTTTGGTTTCCTTCTCCCAAGATTGTCCCTTTTTGCTGGCTATTGGAGCTCAAAGAGAAAACGGAAGGTCTGGGATACATTATCTGATGCTGC
AGTCTCTCGAAAGTCTGGAATGTACAGGAAGTCGATATCTTAAATAG
mRNA sequenceShow/hide mRNA sequence
TTAGAACTCAATTTCAACCATAATTGTTATTATTTATACATTTTTTTTTAGCCAATTCCTTTACCTAATTTAAAAGACAAAGAAATGAGTAAATGAGTAAAATGACAAAT
GCTTCCTTATAATAAAAAAAGGAGAAGGATCTGGATTTTCATTTAAAATAACTATCCCAAGAGGCATATCATCTATAATTACCCTAAGAGGAGAATGATTAATACGAAAT
TTAAAAGCATAAATATCAGTCACTTCAATGAAAATACAGATTTTAGATTTTTTTTATAAGATATTTTTATTCAAAAGCCACATGGACAAAGTAAGGACAGTTGTTCAATA
ACAATTGGCTTACAAATTATTCTTAAATTTGGGTTTAGAGGGGCTGAAAACTAATTTACCAGTGGGTAACTAATAAATTGATAAAAAAATATTGGTTTTATATATATTAA
ACAACGAGTAGAATCATTACACACGGTTTTTGCCGTTGGCACTGGCCCCCACCGCCACCGCCCCTCTCCTGTTCCCTCATTCAGCTGCCATTGTTGTGAACTCTGTCACT
CAACCTTCCTACCAACTCACTCGTTTAAGGGAAAACGATATCAGCCGTTTAGTGGGTTCCTAAAGGGGTTTGTAAACCTCCCACCAAGGACTGGATGAATTCCTCAAAAG
AGCAAAAATGTCTTGGAGGATTCCAGGTTCAAGCTGTAGCGTGTAATCGTCATTCGTTACAAATTCTTCTTAGTGGATCTTTTGATCATTCAGTAGTTATGAAAGATGCA
AGAAATCCTTCCCATTCAGGTTACAAGTGGCTAGTTAAAGCAGATGTGGAGAGCTTGGTATGAGATCCACATACAGAGCACATGTTTGTGGTGAGCCTAGAGGATGGTCC
AGTGAAAGGTTTTGACATCCGGAATCCCACCACAGAGACTAGTTCTGAATCAAAAGCAAGTTTTACTCTCCATGCGCATTAGAAAGATCTACATGCAACTGGATCTACTG
ACAAAATGCTCATTCGTTAAATTATGGGACTTGTCCAATAACGAACCTTTATGTGTGGCATCCACCAACCTTAAAGTAGGTGCTATGCTTTTGGTTTCCTTCTCCCAAGA
TTGTCCCTTTTTGCTGGCTATTGGAGCTCAAAGAGAAAACGGAAGGTCTGGGATACATTATCTGATGCTGCAGTCTCTCGAAAGTCTGGAATGTACAGGAAGTCGATATC
TTAAATAGTGAATTGACTGAGTTATATCAAATATATTTGAGAAACATTTGGTTACGTTTGTGTACTTAGTTTTGGGATCTTTTCTTTGACAACTGGGCTTCGTCCTTATA
ATTTTGAAGCTTGAGTTTGTCAATATTCAATTCCTCTGTATTTTCTTGTGGCAAGCCATTTGAAAATTTACTGAGTACAACCCCTACTCCAAATTAATGGATCCTTGGCA
CTCTTGACTAATGCTCATATTTTATTGCAGGAAAAAAACATTGGTGAAAACGAAAATTGGATTCCGTGTTCATAAGTCGTCCTTAAAAGGCTGAAAAAAGGAAGGGGAAA
AGAAAAAAGAAAAAAAATAATTGTCATTGGTGCATTGGTGGAGGTGCCATTGGATAAGCAACTGGCATAACATATGGAGGATGGGGATGTATTCCATGAGGAAGCATCAC
TGGAGTGCCAACCGCTGATGCTATGTGCCCTGGAGGAGCTGCCACTGGTTGCCCAACAGGTGCCCCGTACATGCCTATTCCGGGCAGATGCTGCTGAGGCCGGTGCTTCC
CTGGCGGTCCCAAAGCCGGCGGATTACTCTGGTTCGTGCCGTTTGTCTGGTGGCCAGTGATCGGAGCTTGATGGGACATGACATCGCCACCACCGCCATTATTAACTGAG
GTCAGTCAGGAGGAAGGTTGAAGCTGAAATGTTTTGTCTATGGCTATACGTGGTCTATTCTCCACTTCAAGTTTTTGACCCCAAACTTCACCACACAAAATATTCAAGGA
TCACGTCCACCTCTTTGATATTGACAGAAAGAGAGAGGAGTGATAGGCCTACTTCTTCTTCCTTCTTTTTATTTAAGAATCTTACGTAATGAGATTGTATTCCCAGAGTT
CAATTTTAACAATCGTGTAAGTTTGAGAGTGTAACTTTTATCGTTAAAAGTTAAGGATCTAACCAAAACGAGGGTAGCTCAGTTGTAATTGACATGATCTTTCATCTTAT
AGGTGAGAGGTTTTAATCTTTCAATCCTCAATTGTTGATATTAGAGAAAAAAAAGTTAATTGCAACTACCACCAGCAATGGATGGATTTTGCAATTTGTCCTTTTATTTA
Protein sequenceShow/hide protein sequence
MRIRKIYMQLDLLTKCSFVKLWDLSNNEPLCVASTNLKVGAMLLVSFSQDCPFLLAIGAQRENGRSGIHYLMLQSLESLECTGSRYLK