CuGenDBv2

Gene ID	PI0019269
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	40S ribosomal protein S3a
Genome location	chr06:3973215..3975445
RNA-Seq Expression	PI0019269
Synteny	PI0019269
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae IPR018281 - Ribosomal protein S3Ae, conserved site IPR027500 - 40S ribosomal protein S1/3, eukaryotes

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134125.1 40S ribosomal protein S3a [Cucumis sativus]

3.5e-109

94.91

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFT KNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

XP_008438626.1 PREDICTED: 40S ribosomal protein S3a [Cucumis melo]

3.5e-109

94.91

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFT KNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

XP_022979234.1 40S ribosomal protein S3a-like [Cucurbita maxima]

7.8e-109

94.44

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFT KNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQ DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

XP_023527182.1 40S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo]

3.5e-109

94.91

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFT KNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQ DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

XP_038875051.1 40S ribosomal protein S3a [Benincasa hispida]

7.8e-109

94.44

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFT KNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQ DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM+NQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4P6 40S ribosomal protein S3a

1.7e-109

94.91

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFT KNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

A0A1S3AXI4 40S ribosomal protein S3a

1.7e-109

94.91

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFT KNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

A0A5D3CZ21 40S ribosomal protein S3a

1.7e-109

94.91

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFT KNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

A0A6J1IG66 40S ribosomal protein S3a

5.0e-109

94.44

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFT KNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQ DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

A0A6J1IW45 40S ribosomal protein S3a

3.8e-109

94.44

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFT KNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQ DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

2.1e-101

86.57

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF  +NVGKTLV+RTQGTKIASEGLKHRVFEISLADLQ DE+ AYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N A SCDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

A7Q5X9 40S ribosomal protein S3a-2

9.6e-102

86.57

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPS+F+ +NVGKTLV+RTQGTKIASEGLKHRVFEISLADLQ DE+HAYRKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLRMFCI FTK+R NQ K+T YAQSSQIRQIRRKMREIM  QAASCDLKELVRKFIPE IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

P33444 40S ribosomal protein S3a

2.5e-102

86.11

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF+ +NVGKTLVTRTQGTKIASEGL+HRVFEISLADLQ DE+H++RKIRLRAED+QG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW +LIEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCDLK+LV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

P49198 40S ribosomal protein S3a

1.6e-101

84.72

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQ DE+H+YRKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGM+ TTDKLRSLV+KW +LIEAHVDVKTTDN+TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

Q8GTE3 40S ribosomal protein S3a

1.8e-103

88.89

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPSVF  KNVGKTLV+RTQGTKIASEGLKHRVFEISLADLQ DE++A+RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        +GM+FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQA SCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        TSSIYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

7.1e-100

81.94

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAPS+FT++NVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE++AYRKIRLRAEDVQGRNVL  F
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +A+SCDLK+LV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        T  IYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

AT4G34670.1 Ribosomal protein S3Ae

1.4e-100

83.33

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAP  FTN+NVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE++AYRKIRLRAEDVQGRNVLT F
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +A+SCDLKELV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPFKMCLSGKLK
        T  IYP +     K+K
Subjt:  TSSIYPFKMCLSGKLK

Sequences

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CDS sequence

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ATGGCCGTCGGCAAGAACAAGCGGATTTCAAAGGGAAAGAAGGGTGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCTCCTTCAGT
TTTCACTAATAAGAATGTCGGAAAGACTCTTGTTACTCGCACCCAGGGTACCAAGATTGCATCTGAAGGACTCAAACATAGAGTTTTCGAGATCTCGTTGGCTGATCTCC
AGAAAGATGAAGAGCATGCCTACAGAAAGATTAGATTGAGAGCAGAAGATGTTCAAGGGAGGAATGTACTGACAAATTTCTGGGGAATGAATTTCACCACTGACAAATTG
AGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCACGTAGATGTCAAAACCACAGACAACTACACTCTTAGAATGTTTTGCATTGGATTTACCAAGAGAAGGCC
AAACCAAGTGAAAAGGACCTGTTATGCTCAGTCGAGCCAGATCAGGCAGATCCGCCGTAAGATGAGAGAAATCATGGTAAACCAAGCAGCCTCTTGCGATTTGAAGGAAT
TGGTTCGCAAGTTCATTCCCGAGTCAATTGGCAAGGAGATTGAAAAGGCAACATCCAGTATCTACCCCTTCAAAATGTGTTTATCCGGAAAGTTAAAATTTTGA

mRNA sequence

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AAACTTTCTCTGCCTTGGAGCATTTCATCCGAAGAGTTAGGGCAACTCACCTCCTTCAGCCATGGCCGTCGGCAAGAACAAGCGGATTTCAAAGGGAAAGAAGGGTGGCA
AGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCTCCTTCAGTTTTCACTAATAAGAATGTCGGAAAGACTCTTGTTACTCGCACCCAGGGT
ACCAAGATTGCATCTGAAGGACTCAAACATAGAGTTTTCGAGATCTCGTTGGCTGATCTCCAGAAAGATGAAGAGCATGCCTACAGAAAGATTAGATTGAGAGCAGAAGA
TGTTCAAGGGAGGAATGTACTGACAAATTTCTGGGGAATGAATTTCACCACTGACAAATTGAGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCACGTAGATG
TCAAAACCACAGACAACTACACTCTTAGAATGTTTTGCATTGGATTTACCAAGAGAAGGCCAAACCAAGTGAAAAGGACCTGTTATGCTCAGTCGAGCCAGATCAGGCAG
ATCCGCCGTAAGATGAGAGAAATCATGGTAAACCAAGCAGCCTCTTGCGATTTGAAGGAATTGGTTCGCAAGTTCATTCCCGAGTCAATTGGCAAGGAGATTGAAAAGGC
AACATCCAGTATCTACCCCTTCAAAATGTGTTTATCCGGAAAGTTAAAATTTTGAAGGCACCCAAATTTGATCTTGGGAAGTTGATGGAGGTTCATGGCGACTACTCGGA
AGACGTTGGTGTGAAGGTTGAGAGACCTGCTGACGAAGCTGCTGTAGAGGGGGCTACTGAAGTTGTTGGAGCTTGAGTTCAGTTATGTTAAAGTTCATTTGAGTTGGATT
AATCTGTTTTTTGTTTAATTTTGGCCCCCTTTTGTTTATTTAAACTTAGTTTTAACCCGCTTCTCCGTTTAATCAGAGAGTTGGTTTTGAGGATGGCAATTTTGTGCTAT
TAGTCAAAGAATACTTTCATTGAATTAATTTAGCAAATTGCACCGTTTTCCCCCTTTCCATTGGATAATGCAAATAAATAAATACTACCTGGATAGGCAGTCTTGTATGA

Protein sequence

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MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTNKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKL
RSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCDLKELVRKFIPESIGKEIEKATSSIYPFKMCLSGKLKF

PI0019269 (gene) of Melon (PI 482460) v1 genome