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PI0019293 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019293
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr06:17697049..17697456
RNA-Seq ExpressionPI0019293
SyntenyPI0019293
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]2.2e-2967.01Show/hide
Query:  NNRNVPPPQAAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGIS
        NN+N P  Q  QEQN AY+AHDLD+PI+SYA+PNLY+FNPGIAY  F EN  FEIK +ML M QN GQF GHP EDP++HI +FY ICASF+M  IS
Subjt:  NNRNVPPPQAAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.3e-3770.91Show/hide
Query:  MENNNNRNVPPPQAAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGI
        M N NN+ +P  QAAQ  N  Y+A D DRPIRSYA+PNLY+FNPGIAYP FSEN +FEIK VMLQ+IQN GQF  HP +DPH++I +FYSICASFHMPGI
Subjt:  MENNNNRNVPPPQAAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGI

Query:  SPEELRFTLF
        S EELRFT F
Subjt:  SPEELRFTLF

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]2.6e-3052.99Show/hide
Query:  AAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGISPEELRFTLFPIT
        A  + N   +AHD +RP+R YA+PNLYNF PGI  P F  N +FE+K VMLQM+Q  GQF G  GEDPH H+ SF  IC++F M G+  + +R TLFP +
Subjt:  AAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGISPEELRFTLFPIT

Query:  LRDEVKRWANALEVGEV
        LRDE ++WA + E GE+
Subjt:  LRDEVKRWANALEVGEV

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]8.5e-2948.87Show/hide
Query:  MENNNNRNVPPPQAAQE---QNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHM
        M +NNN   P          Q+  ++A D + PIR+YAAPNLY+F+PGI+ P+  ENA+FEIK VM+QMIQN+ QF     E+PH H++ F  +C++F +
Subjt:  MENNNNRNVPPPQAAQE---QNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHM

Query:  PGISPEELRFTLFPITLRDEVKRWANALEVGEV
        PGI+P  +R  LFP TLRD+ KRWA++LE  E+
Subjt:  PGISPEELRFTLFPITLRDEVKRWANALEVGEV

XP_038896595.1 uncharacterized protein LOC120084850 [Benincasa hispida]1.0e-2656Show/hide
Query:  IRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGISPEELRFTLFPITLRDEVKRWANALEVGEV
        +R+YAAPN YNF P I+ P   ENA F+I+S+MLQMIQN G+F G  GEDPH H++ F  IC +F +P +SPE +R  +FP TLRDE +RWA +LE  E+
Subjt:  IRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGISPEELRFTLFPITLRDEVKRWANALEVGEV

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein6.2e-2550Show/hide
Query:  QNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGISPEELRFTLFPITLRDE
        +N   +AH+L+ PI  YA+P+LY FN GI YP F  NA+F++K  ML MIQ   QF G+  EDP +HI S Y +C+SFH+P +S E+L  T F  TL+D+
Subjt:  QNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGISPEELRFTLFPITLRDE

Query:  VKRWANALEV
        +K+W   LEV
Subjt:  VKRWANALEV

A0A5A7UDN8 Uncharacterized protein1.1e-2967.01Show/hide
Query:  NNRNVPPPQAAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGIS
        NN+N P  Q  QEQN AY+AHDLD+PI+SYA+PNLY+FNPGIAY  F EN  FEIK +ML M QN GQF GHP EDP++HI +FY ICASF+M  IS
Subjt:  NNRNVPPPQAAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 16.3e-3870.91Show/hide
Query:  MENNNNRNVPPPQAAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGI
        M N NN+ +P  QAAQ  N  Y+A D DRPIRSYA+PNLY+FNPGIAYP FSEN +FEIK VMLQ+IQN GQF  HP +DPH++I +FYSICASFHMPGI
Subjt:  MENNNNRNVPPPQAAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGI

Query:  SPEELRFTLF
        S EELRFT F
Subjt:  SPEELRFTLF

A0A5D3BVN1 Putative disease resistance RPP13-like protein 11.9e-2663.73Show/hide
Query:  MENNNNRNVPPPQAAQEQ-NAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPG
        M +N N  VP   A Q Q N   +AH+LD PIR+Y + NLY+FN GIAY VF ENA FE+K VMLQMIQ  GQF+G+ GEDPHEHI SFYSICASFHM  
Subjt:  MENNNNRNVPPPQAAQEQ-NAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

U5CUI2 Retrotrans_gag domain-containing protein7.8e-2048.21Show/hide
Query:  AAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGISPEELRFTLFPIT
        A Q  N   +A D  R IR YAAP     NPGI  P   +  +FE+K VM QM+Q VGQF+G P EDPH H+ SF  +  SF + G+S E LR  LFP +
Subjt:  AAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGISPEELRFTLFPIT

Query:  LRDEVKRWANAL
        LRD  + W N L
Subjt:  LRDEVKRWANAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACAACAATAATAGAAATGTACCGCCTCCTCAAGCTGCCCAAGAACAAAACGCCGCCTACATGGCACATGATTTGGATAGACCAATTAGGTCTTATGCTGCACC
CAACCTTTACAACTTCAACCCAGGAATCGCCTACCCTGTGTTCAGCGAGAACGCTAAATTTGAGATCAAATCCGTAATGTTACAGATGATCCAGAACGTCGGACAGTTCA
ACGGTCACCCTGGGGAAGATCCACATGAGCACATAAGCAGTTTCTACTCTATATGTGCTTCCTTCCATATGCCAGGCATTTCGCCTGAAGAATTAAGATTCACGCTTTTC
CCGATAACTCTGAGGGATGAGGTGAAGAGGTGGGCAAATGCCTTGGAAGTTGGCGAGGTGGAACGTGGGACCAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACAACAATAATAGAAATGTACCGCCTCCTCAAGCTGCCCAAGAACAAAACGCCGCCTACATGGCACATGATTTGGATAGACCAATTAGGTCTTATGCTGCACC
CAACCTTTACAACTTCAACCCAGGAATCGCCTACCCTGTGTTCAGCGAGAACGCTAAATTTGAGATCAAATCCGTAATGTTACAGATGATCCAGAACGTCGGACAGTTCA
ACGGTCACCCTGGGGAAGATCCACATGAGCACATAAGCAGTTTCTACTCTATATGTGCTTCCTTCCATATGCCAGGCATTTCGCCTGAAGAATTAAGATTCACGCTTTTC
CCGATAACTCTGAGGGATGAGGTGAAGAGGTGGGCAAATGCCTTGGAAGTTGGCGAGGTGGAACGTGGGACCAGTTAA
Protein sequenceShow/hide protein sequence
MENNNNRNVPPPQAAQEQNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFSENAKFEIKSVMLQMIQNVGQFNGHPGEDPHEHISSFYSICASFHMPGISPEELRFTLF
PITLRDEVKRWANALEVGEVERGTS