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PI0019321 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019321
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr08:2882126..2882452
RNA-Seq ExpressionPI0019321
SyntenyPI0019321
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031700.1 hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa]1.3e-1143.22Show/hide
Query:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGLKEKETTRRGNAEE-------
        K++ V+L AI R+S+LSWM+ P+G MPFPSTIEAL L+ VP L A  Q  +   + +Q  +N+ ITLHQNKEEE     L +     +G  EE       
Subjt:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGLKEKETTRRGNAEE-------

Query:  ----KKAKHDESSSRPKR
            +K  HD +SS  K+
Subjt:  ----KKAKHDESSSRPKR

KAA0050752.1 hypothetical protein E6C27_scaffold46449G00010 [Cucumis melo var. makuwa]3.2e-1041.96Show/hide
Query:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGL-----KEKETTRRGNAEEKK
        K++ V+L AI ++S+LS M+APK  MPFP TI+AL L+ VP L+   Q  +   +C+Q+ +N+ ITLHQNKEE+     L     +EKE +      ++K
Subjt:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGL-----KEKETTRRGNAEEKK

Query:  AKHDESSSRPKR
          HD +SS  K+
Subjt:  AKHDESSSRPKR

KAA0053237.1 hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa]9.9e-1251.39Show/hide
Query:  LAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEE
        +A +L AI + ++ +WME PKG   FPS +E LYL+ +PSLA  PQ  +P  + NQ  +NR+IT HQNKEEE
Subjt:  LAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEE

TYJ97633.1 hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa]3.4e-1252.78Show/hide
Query:  LAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEE
        +A +L AI + ++L+WME PKG   FPS +E LYL+ +PSLA  PQ  +P  + NQ  +NR+IT HQNKEEE
Subjt:  LAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEE

TYK30047.1 hypothetical protein E5676_scaffold216G00150 [Cucumis melo var. makuwa]4.1e-1041.96Show/hide
Query:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGL-----KEKETTRRGNAEEKK
        K++ V+L AI ++S+LS MEAPK  MPFP TI+AL L+ VP L+   Q  +   +C+Q  +N+ I LHQNKEE+     L     +EKE +      ++K
Subjt:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGL-----KEKETTRRGNAEEKK

Query:  AKHDESSSRPKR
          HD +SS  K+
Subjt:  AKHDESSSRPKR

TrEMBL top hitse value%identityAlignment
A0A5A7SLS8 Uncharacterized protein6.2e-1243.22Show/hide
Query:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGLKEKETTRRGNAEE-------
        K++ V+L AI R+S+LSWM+ P+G MPFPSTIEAL L+ VP L A  Q  +   + +Q  +N+ ITLHQNKEEE     L +     +G  EE       
Subjt:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGLKEKETTRRGNAEE-------

Query:  ----KKAKHDESSSRPKR
            +K  HD +SS  K+
Subjt:  ----KKAKHDESSSRPKR

A0A5A7U4J2 Uncharacterized protein1.5e-1041.96Show/hide
Query:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGL-----KEKETTRRGNAEEKK
        K++ V+L AI ++S+LS M+APK  MPFP TI+AL L+ VP L+   Q  +   +C+Q+ +N+ ITLHQNKEE+     L     +EKE +      ++K
Subjt:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGL-----KEKETTRRGNAEEKK

Query:  AKHDESSSRPKR
          HD +SS  K+
Subjt:  AKHDESSSRPKR

A0A5A7UFG4 Uncharacterized protein4.8e-1251.39Show/hide
Query:  LAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEE
        +A +L AI + ++ +WME PKG   FPS +E LYL+ +PSLA  PQ  +P  + NQ  +NR+IT HQNKEEE
Subjt:  LAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEE

A0A5D3BEA4 Uncharacterized protein1.6e-1252.78Show/hide
Query:  LAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEE
        +A +L AI + ++L+WME PKG   FPS +E LYL+ +PSLA  PQ  +P  + NQ  +NR+IT HQNKEEE
Subjt:  LAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEE

A0A5D3E1R7 Uncharacterized protein2.0e-1041.96Show/hide
Query:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGL-----KEKETTRRGNAEEKK
        K++ V+L AI ++S+LS MEAPK  MPFP TI+AL L+ VP L+   Q  +   +C+Q  +N+ I LHQNKEE+     L     +EKE +      ++K
Subjt:  KRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGL-----KEKETTRRGNAEEKK

Query:  AKHDESSSRPKR
          HD +SS  K+
Subjt:  AKHDESSSRPKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGTTGGCAGTTGATCTCGACGCAATTAGGAGAGACTCCCTCCTTAGCTGGATGGAAGCACCCAAAGGCACCATGCCTTTCCCCTCCACCATTGAGGCTCTCTA
TCTGCAGGTTGTGCCATCTTTGGCAGCCAGCCCGCAGACATCCCTTCCTAGAGGTATCTGTAACCAGATGGCCGTTAACCGTATTATAACTCTTCACCAAAATAAAGAAG
AGGAAGAAGCTTGCCCAGGCCTGAAGGAAAAAGAAACAACAAGGCGAGGCAATGCTGAAGAGAAAAAGGCCAAACACGATGAATCAAGCTCACGACCAAAGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGTTGGCAGTTGATCTCGACGCAATTAGGAGAGACTCCCTCCTTAGCTGGATGGAAGCACCCAAAGGCACCATGCCTTTCCCCTCCACCATTGAGGCTCTCTA
TCTGCAGGTTGTGCCATCTTTGGCAGCCAGCCCGCAGACATCCCTTCCTAGAGGTATCTGTAACCAGATGGCCGTTAACCGTATTATAACTCTTCACCAAAATAAAGAAG
AGGAAGAAGCTTGCCCAGGCCTGAAGGAAAAAGAAACAACAAGGCGAGGCAATGCTGAAGAGAAAAAGGCCAAACACGATGAATCAAGCTCACGACCAAAGAGATAG
Protein sequenceShow/hide protein sequence
MKRLAVDLDAIRRDSLLSWMEAPKGTMPFPSTIEALYLQVVPSLAASPQTSLPRGICNQMAVNRIITLHQNKEEEEACPGLKEKETTRRGNAEEKKAKHDESSSRPKR