CuGenDBv2

Gene ID	PI0019367
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	PMD domain-containing protein
Genome location	chr08:1436731..1437270
RNA-Seq Expression	PI0019367
Synteny	PI0019367
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]

2.9e-77

75.98

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Query:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW
        MVYFTERFLSG R+L IL+D+NQP+EDGLSL+VEK   G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWVLQSSIH+E+ N  R L L  R+IEGQTRW
Subjt:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRNSDVV+AFCEAWCPSTNTLHTMAGE+SISL
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]

4.1e-79

77.65

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Query:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW
        MVYFTERFLSG R+L IL+D+NQP+EDGLSL+VEK   G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWVLQSSIH+E+ N  R L L  R+IEGQTRW
Subjt:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRNSDVV+AFCEAWCPSTNTLHTMAGE+SISL
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]

2.5e-76

74.86

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Query:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW
        MVYFTERFLSG R+L IL+D+NQP+EDGLSL++EK   G+FAD WP LDN+S+LP+LSVEIPLS+GK+AW+LQSSIH+E+ N  R L L  R+IEGQTRW
Subjt:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        G +TKVPGEFCFTDCYWEWLE VVGR+  +LY  RL+G VT SLYTYDRNSDVV+AF EAWCPSTNTLHTMAGE+SISL
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]

5.9e-78

77.09

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Query:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW
        MVYFTERFLSG R+L IL+D+NQP+EDGLSL+VEK   G+FAD WP LDN+S+LP+LSVEIPLS+GK+AW+LQSSIH E+ N  R L L  R+IEGQTRW
Subjt:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        G VTKVP EFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRNSDVV+AFCEAWCPSTNTLHTMAGE+SISL
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]

2.9e-77

75.98

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Query:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW
        MVYFTERFLSG R+L IL+D+NQP+EDGLSL+VEK   G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWVLQSSIH+E+ N  R L L  R+IEGQTRW
Subjt:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRNSDVV+AFCEAWCPSTNTLHTMAGE+SISL
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TFC8 PMD domain-containing protein

1.4e-77

75.98

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Query:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW
        MVYFTERFLSG R+L IL+D+NQP+EDGLSL+VEK   G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWVLQSSIH+E+ N  R L L  R+IEGQTRW
Subjt:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRNSDVV+AFCEAWCPSTNTLHTMAGE+SISL
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

A0A5A7TX42 Uncharacterized protein

2.0e-79

77.65

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Query:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW
        MVYFTERFLSG R+L IL+D+NQP+EDGLSL+VEK   G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWVLQSSIH+E+ N  R L L  R+IEGQTRW
Subjt:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRNSDVV+AFCEAWCPSTNTLHTMAGE+SISL
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

A0A5A7U8L3 PMD domain-containing protein

1.2e-76

74.86

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Query:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW
        MVYFTERFLSG R+L IL+D+NQP+EDGLSL++EK   G+FAD WP LDN+S+LP+LSVEIPLS+GK+AW+LQSSIH+E+ N  R L L  R+IEGQTRW
Subjt:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        G +TKVPGEFCFTDCYWEWLE VVGR+  +LY  RL+G VT SLYTYDRNSDVV+AF EAWCPSTNTLHTMAGE+SISL
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

A0A5A7VHW8 PMD domain-containing protein

2.9e-78

77.09

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Query:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW
        MVYFTERFLSG R+L IL+D+NQP+EDGLSL+VEK   G+FAD WP LDN+S+LP+LSVEIPLS+GK+AW+LQSSIH E+ N  R L L  R+IEGQTRW
Subjt:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        G VTKVP EFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRNSDVV+AFCEAWCPSTNTLHTMAGE+SISL
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

A0A5D3D7V4 PMD domain-containing protein

1.4e-77

75.98

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Query:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW
        MVYFTERFLSG R+L IL+D+NQP+EDGLSL+VEK   G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWVLQSSIH+E+ N  R L L  R+IEGQTRW
Subjt:  MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRNSDVV+AFCEAWCPSTNTLHTMAGE+SISL
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G50750.1 Plant mobile domain protein family

7.8e-04

38.3

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Query:  DARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        +A +F AV AS+Y   +N D++    E WCP T T     GE +++L
Subjt:  DARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

AT1G50770.1 Aminotransferase-like, plant mobile domain family protein

6.0e-04

43.48

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Query:  ARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        A +F AVTAS Y  + N+++V    E WCP T T     GE +I+L
Subjt:  ARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

AT1G50790.1 Plant mobile domain protein family

1.2e-04

43.48

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Query:  ARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL
        A +F A+ AS Y   +N+D+V    E WCP TNT     GE +I+L
Subjt:  ARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

Sequences

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CDS sequence

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ATGGTTTACTTCACCGAACGCTTCTTATCTGGAAATAGGTACCTTACAATCCTTACTGATAAGAATCAACCAAAAGAAGATGGTCTCAGTCTCCTTGTAGAGAAGTCGTT
GACGGGTTCTTTTGCAGATTTTTGGCCAAACCTAGACAACAGCTCGATTCTTCCCAAACTATCTGTGGAGATACCTTTGTCTCAGGGAAAAAATGCATGGGTCTTGCAAT
CTTCTATCCATGATGAGTCTCTTAATGTCAATCGAGTCCTCATTCTCAGACATCGTATAATTGAAGGCCAAACCCGTTGGGGTGCCGTGACTAAAGTCCCAGGAGAATTC
TGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTTGTAGTTGGTCGAAGTGGGGGAATTCTCTACGATGCTCGTTTATTCGGTGCCGTAACAGCTTCTTTGTACACATA
TGATCGTAACAGCGATGTGGTTCAAGCATTTTGTGAAGCTTGGTGTCCTTCAACTAATACTCTCCATACCATGGCAGGCGAGATGTCCATTTCCTTATAG

mRNA sequence

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Protein sequence

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MVYFTERFLSGNRYLTILTDKNQPKEDGLSLLVEKSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDESLNVNRVLILRHRIIEGQTRWGAVTKVPGEF
CFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVQAFCEAWCPSTNTLHTMAGEMSISL

PI0019367 (gene) of Melon (PI 482460) v1 genome