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PI0019377 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019377
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:13596988..13599294
RNA-Seq ExpressionPI0019377
SyntenyPI0019377
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.6e-9982.4Show/hide
Query:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK
        E+GQSVNEYLAT QPIWT+LDQAKISPDHIRLIKVL+GL PEYE VRAALLHRNPLPSLDAAVQEILFEEKRL I SS+ SD ALAT+H R  NE  F K
Subjt:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK

Query:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL
        NCKL G+KFANCPT ECRYCHKRGHIL+NCPTRPPRPPGHSHKPK S K+GSSSVVAA T SD T   S QL DLHDLLKQVISS STALA T G  WLL
Subjt:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL

Query:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN
        DSACCNHMTSDISLLSS   VQSLPPIHSADGN
Subjt:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN

KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.3e-10082.83Show/hide
Query:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK
        E+GQSVNEYLAT QPIWT+LDQAKISPDHIRLIKVL+GL PEYESVRAALLHRNPLPSLDAAVQEILFEEKRL I SS+ SD ALAT+H R  NE  F K
Subjt:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK

Query:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL
        NCKL G+KFANCPT ECRYCHKRGHIL+NCPTRPPRPPGHSHKPK S K+GSSSVVAA T SD T   S QL DLHDLLKQVISS STALA T G  WLL
Subjt:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL

Query:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN
        DSACCNHMTSDISLLSS   VQSLPPIHSADGN
Subjt:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN

KAA0047794.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.8e-9981.12Show/hide
Query:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK
        EVGQSVNEYL TFQPIWT+LDQAKISPDHIRLIKVL+GL  EYESVRAALLHRNPLPSLDAAVQEILFEEKRL I SS+PSD ALAT+H R  NE +F K
Subjt:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK

Query:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL
        NCKL G+KFANCPT ECRYC+KRGHIL+NCPTRPPRPP HSHK K S K GSSSVVAA T SD T   S QL DLHDLLKQV+SS STALA T G  WLL
Subjt:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL

Query:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN
        DSACCNHMTSD+SLLSS + VQSLPPIHSADGN
Subjt:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN

KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.8e-9881.97Show/hide
Query:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK
        EVGQSVNEYLAT QPIWT+LDQAKISPDHIRLIKVL+GL PEYE VRAALLHRN LPSLDAAVQEILFEEKRL I SS+ SD ALAT+H R  NE  F K
Subjt:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK

Query:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL
        NCKL G+KFANCPT EC+YCHKRGHIL+NCPTRPPRPPGHSHKPK   K+GSSSVVAA T SD T   S QL DLHDLLKQVISS STALA T G  WLL
Subjt:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL

Query:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN
        DSACCNHMTSDISLLSS T VQSLPPIHSADGN
Subjt:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN

KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.3e-10082.83Show/hide
Query:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK
        E+GQSVNEYLAT QPIWT+LDQAKISPDHIRLIKVL+GL PEYESVRAALLHRNPLPSLDAAVQEILFEEKRL I SS+ SD ALAT+H R  NE  F K
Subjt:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK

Query:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL
        NCKL G+KFANCPT ECRYCHKRGHIL+NCPTRPPRPPGHSHKPK S K+GSSSVVAA T SD T   S QL DLHDLLKQVISS STALA T G  WLL
Subjt:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL

Query:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN
        DSACCNHMTSDISLLSS   VQSLPPIHSADGN
Subjt:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN

TrEMBL top hitse value%identityAlignment
A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-947.8e-10082.4Show/hide
Query:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK
        E+GQSVNEYLAT QPIWT+LDQAKISPDHIRLIKVL+GL PEYE VRAALLHRNPLPSLDAAVQEILFEEKRL I SS+ SD ALAT+H R  NE  F K
Subjt:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK

Query:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL
        NCKL G+KFANCPT ECRYCHKRGHIL+NCPTRPPRPPGHSHKPK S K+GSSSVVAA T SD T   S QL DLHDLLKQVISS STALA T G  WLL
Subjt:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL

Query:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN
        DSACCNHMTSDISLLSS   VQSLPPIHSADGN
Subjt:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN

A0A5A7TXR0 Putative mitochondrial protein1.3e-9981.12Show/hide
Query:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK
        EVGQSVNEYL TFQPIWT+LDQAKISPDHIRLIKVL+GL  EYESVRAALLHRNPLPSLDAAVQEILFEEKRL I SS+PSD ALAT+H R  NE +F K
Subjt:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK

Query:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL
        NCKL G+KFANCPT ECRYC+KRGHIL+NCPTRPPRPP HSHK K S K GSSSVVAA T SD T   S QL DLHDLLKQV+SS STALA T G  WLL
Subjt:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL

Query:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN
        DSACCNHMTSD+SLLSS + VQSLPPIHSADGN
Subjt:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN

A0A5A7UVX4 Retrovirus-related Pol polyprotein from transposon TNT 1-948.7e-9981.97Show/hide
Query:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK
        EVGQSVNEYLAT QPIWT+LDQAKISPDHIRLIKVL+GL PEYE VRAALLHRN LPSLDAAVQEILFEEKRL I SS+ SD ALAT+H R  NE  F K
Subjt:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK

Query:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL
        NCKL G+KFANCPT EC+YCHKRGHIL+NCPTRPPRPPGHSHKPK   K+GSSSVVAA T SD T   S QL DLHDLLKQVISS STALA T G  WLL
Subjt:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL

Query:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN
        DSACCNHMTSDISLLSS T VQSLPPIHSADGN
Subjt:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN

A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-10082.83Show/hide
Query:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK
        E+GQSVNEYLAT QPIWT+LDQAKISPDHIRLIKVL+GL PEYESVRAALLHRNPLPSLDAAVQEILFEEKRL I SS+ SD ALAT+H R  NE  F K
Subjt:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK

Query:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL
        NCKL G+KFANCPT ECRYCHKRGHIL+NCPTRPPRPPGHSHKPK S K+GSSSVVAA T SD T   S QL DLHDLLKQVISS STALA T G  WLL
Subjt:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL

Query:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN
        DSACCNHMTSDISLLSS   VQSLPPIHSADGN
Subjt:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN

A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-10082.83Show/hide
Query:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK
        E+GQSVNEYLAT QPIWT+LDQAKISPDHIRLIKVL+GL PEYESVRAALLHRNPLPSLDAAVQEILFEEKRL I SS+ SD ALAT+H R  NE  F K
Subjt:  EVGQSVNEYLATFQPIWTKLDQAKISPDHIRLIKVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYK

Query:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL
        NCKL G+KFANCPT ECRYCHKRGHIL+NCPTRPPRPPGHSHKPK S K+GSSSVVAA T SD T   S QL DLHDLLKQVISS STALA T G  WLL
Subjt:  NCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHKPKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLL

Query:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN
        DSACCNHMTSDISLLSS   VQSLPPIHSADGN
Subjt:  DSACCNHMTSDISLLSSPTSVQSLPPIHSADGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCATAGAAAGACATCAGATAACAAAGAACCAGAAACAAACCAGCCGCCGCTGAAGATTCCGTCCGCCCAATCTCGTCCGCCGAATCAAACCAAGATCCCGTCCAC
CGAAGACCCAGCCTACCGAATCAGATTTCGCTCGTCGAAAATCCTGTCTCTCAGCCGAAAATCTTGTCCATCAGCCGAAAATCCCGTACTTCTCCTACCGTCCGCCGAAT
CAGACCCAGCCGAAGTCGGACAATCTGTGAATGAATACCTTGCCACTTTTCAGCCTATCTGGACTAAGTTAGATCAGGCAAAAATCAGTCCTGACCATATCCGTCTCATC
AAAGTACTTATCGGACTCCATCCAGAGTATGAATCTGTTCGGGCTGCTCTTTTACATCGCAACCCTCTACCATCACTTGATGCTGCCGTTCAGGAAATCTTATTTGAGGA
GAAAAGACTTGCCATTAGCTCCTCCATGCCCTCTGATGCTGCCCTCGCAACCAGTCATTCACGGCCTACCAATGAGTTCACCTTCTATAAAAATTGTAAACTCCAGGGAT
ATAAGTTTGCTAATTGTCCTACCACTGAGTGCAGGTATTGTCACAAGCGAGGTCACATCTTGGAAAACTGTCCCACTCGTCCACCTCGTCCTCCTGGTCACTCACACAAA
CCCAAGTCCTCGCCTAAATCGGGTTCCTCATCTGTGGTTGCTGCTACCACCTTATCTGACACTACGCCATCTCCAAGTTTTCAGTTACATGATCTCCATGACTTACTAAA
ACAGGTGATCTCTTCCAACTCTACTGCCCTTGCTGCCACATCAGGTATTTTCTGGCTTCTTGATTCAGCTTGTTGCAATCATATGACATCTGACATTTCATTATTGTCCT
CCCCTACCTCTGTCCAATCCCTTCCACCAATCCACTCTGCTGATGGCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCATAGAAAGACATCAGATAACAAAGAACCAGAAACAAACCAGCCGCCGCTGAAGATTCCGTCCGCCCAATCTCGTCCGCCGAATCAAACCAAGATCCCGTCCAC
CGAAGACCCAGCCTACCGAATCAGATTTCGCTCGTCGAAAATCCTGTCTCTCAGCCGAAAATCTTGTCCATCAGCCGAAAATCCCGTACTTCTCCTACCGTCCGCCGAAT
CAGACCCAGCCGAAGTCGGACAATCTGTGAATGAATACCTTGCCACTTTTCAGCCTATCTGGACTAAGTTAGATCAGGCAAAAATCAGTCCTGACCATATCCGTCTCATC
AAAGTACTTATCGGACTCCATCCAGAGTATGAATCTGTTCGGGCTGCTCTTTTACATCGCAACCCTCTACCATCACTTGATGCTGCCGTTCAGGAAATCTTATTTGAGGA
GAAAAGACTTGCCATTAGCTCCTCCATGCCCTCTGATGCTGCCCTCGCAACCAGTCATTCACGGCCTACCAATGAGTTCACCTTCTATAAAAATTGTAAACTCCAGGGAT
ATAAGTTTGCTAATTGTCCTACCACTGAGTGCAGGTATTGTCACAAGCGAGGTCACATCTTGGAAAACTGTCCCACTCGTCCACCTCGTCCTCCTGGTCACTCACACAAA
CCCAAGTCCTCGCCTAAATCGGGTTCCTCATCTGTGGTTGCTGCTACCACCTTATCTGACACTACGCCATCTCCAAGTTTTCAGTTACATGATCTCCATGACTTACTAAA
ACAGGTGATCTCTTCCAACTCTACTGCCCTTGCTGCCACATCAGGTATTTTCTGGCTTCTTGATTCAGCTTGTTGCAATCATATGACATCTGACATTTCATTATTGTCCT
CCCCTACCTCTGTCCAATCCCTTCCACCAATCCACTCTGCTGATGGCAATTAA
Protein sequenceShow/hide protein sequence
MSHRKTSDNKEPETNQPPLKIPSAQSRPPNQTKIPSTEDPAYRIRFRSSKILSLSRKSCPSAENPVLLLPSAESDPAEVGQSVNEYLATFQPIWTKLDQAKISPDHIRLI
KVLIGLHPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLAISSSMPSDAALATSHSRPTNEFTFYKNCKLQGYKFANCPTTECRYCHKRGHILENCPTRPPRPPGHSHK
PKSSPKSGSSSVVAATTLSDTTPSPSFQLHDLHDLLKQVISSNSTALAATSGIFWLLDSACCNHMTSDISLLSSPTSVQSLPPIHSADGN