; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019391 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019391
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionbiogenesis of lysosome-related organelles complex 1 subunit 2
Genome locationchr07:16514245..16516730
RNA-Seq ExpressionPI0019391
SyntenyPI0019391
Gene Ontology termsNA
InterPro domainsIPR019269 - Biogenesis of lysosome-related organelles complex-1, subunit 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607085.1 Biogenesis of lysosome-related organelles complex 1 subunit 2, partial [Cucurbita argyrosperma subsp. sororia]5.1e-4988.43Show/hide
Query:  MAQKEE-RLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI
        MA+KEE +LPN DELAESLNEFFTSV+EMIKSDLLGSSNQL LLE+MN+RVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYI+QIEKIE+QVTEFEAVI
Subjt:  MAQKEE-RLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

XP_004137147.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus]7.3e-5696.69Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
        MAQKEERLPNRD+LAESLNEFFTSV+EMIKSDLLGSSNQL+LLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

XP_008455567.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis melo]5.6e-5696.69Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
        MAQKEERLPNRDELAESLNEFFTSV+EMIKSDLLGSSNQL+LLERMN RVAEEYKG+GDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

XP_022949044.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschata]3.0e-4989.26Show/hide
Query:  MAQKEE-RLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI
        MA+KEE +LPN DELAESLNEFFTSV+EMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYI+QIEKIE+QVTEFEAVI
Subjt:  MAQKEE-RLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

XP_038880795.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida]2.8e-5596.69Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
        MAQKEE+ PNRDELAESLNEFFTSV+EMIKSDLLGSSNQL LLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

TrEMBL top hitse value%identityAlignment
A0A0A0KW18 Uncharacterized protein3.5e-5696.69Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
        MAQKEERLPNRD+LAESLNEFFTSV+EMIKSDLLGSSNQL+LLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

A0A1S3C0T0 biogenesis of lysosome-related organelles complex 1 subunit 22.7e-5696.69Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
        MAQKEERLPNRDELAESLNEFFTSV+EMIKSDLLGSSNQL+LLERMN RVAEEYKG+GDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

A0A6J1GBP4 biogenesis of lysosome-related organelles complex 1 subunit 21.4e-4989.26Show/hide
Query:  MAQKEE-RLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI
        MA+KEE +LPN DELAESLNEFFTSV+EMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYI+QIEKIE+QVTEFEAVI
Subjt:  MAQKEE-RLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

A0A6J1KEZ0 biogenesis of lysosome-related organelles complex 1 subunit 21.4e-4989.26Show/hide
Query:  MAQKEE-RLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI
        MA+KEE +LPN DELAESLNEFFTSV+EMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYI+QIEKIE+QVTEFEAVI
Subjt:  MAQKEE-RLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

A0A6P4A2B4 biogenesis of lysosome-related organelles complex 1 subunit 2-like3.3e-3872.73Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
        MA+K+++ P+RDELAESLN+ F +++ MI S+L G++NQLDLLE+MNLRVAEEYKGFGDVASG+RV+VEQLKSKSG FDEY+ QIE IE QVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLD++VS LESKV SV Q  P
Subjt:  MLDKHVSMLESKVLSVCQNTP

SwissProt top hitse value%identityAlignment
F4K657 Biogenesis of lysosome-related organelles complex 1 subunit 22.6e-3265.38Show/hide
Query:  NRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSML
        +RD+LAESL   FTSV+ M+KS+L G++N LDLLE+MNLRVA EY   GDVA+G+RVF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L
Subjt:  NRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSML

Query:  ESKV
        ESK+
Subjt:  ESKV

Q54Y67 Biogenesis of lysosome-related organelles complex 1 subunit 21.3e-1033.03Show/hide
Query:  LPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVS
        LP  ++L  S  E FT V+  IKS+L  + +  +LL +MN   + +Y+   +V  G+ VF+  LK K   F  Y  +I +++  VT+ E  + +LD++  
Subjt:  LPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVS

Query:  MLESKVLSV
         LE KV ++
Subjt:  MLESKVLSV

Q95XD3 Biogenesis of lysosome-related organelles complex 1 subunit 24.0e-0425.66Show/hide
Query:  LPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVS
        +P+  +LA+++ +    V +  +  L GS  +  LLE MN   A+ Y     VA  +   ++ L  K      Y+ QI+ ++      E   ++L+ +V+
Subjt:  LPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVS

Query:  MLESKVLSVCQNT
         LESK+ ++ Q +
Subjt:  MLESKVLSVCQNT

Arabidopsis top hitse value%identityAlignment
AT5G49550.1 Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1.1.9e-3365.38Show/hide
Query:  NRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSML
        +RD+LAESL   FTSV+ M+KS+L G++N LDLLE+MNLRVA EY   GDVA+G+RVF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L
Subjt:  NRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSML

Query:  ESKV
        ESK+
Subjt:  ESKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAGAAAGAGGAGCGATTACCGAACAGGGACGAGCTCGCCGAGTCGCTTAATGAATTCTTCACCAGCGTGGCCGAAATGATCAAATCGGACCTTCTTGGATCAAG
CAATCAGCTGGACCTTTTAGAGAGAATGAACTTGAGGGTGGCTGAAGAGTACAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAGTTGAAGTCAA
AGAGTGGTGGGTTTGATGAGTATATACACCAAATTGAGAAGATAGAACATCAGGTGACCGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGTTGGAG
TCCAAAGTGTTGTCTGTTTGTCAAAACACGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATAGAATCCAAGTACAGTTTTCAAATTAATACCATCTGCTTGGCTGTTGTCTCTAACTCGTCGTCCAAGGTCCAGCAGCTGTTCTGTGTCCCGACGAGCCGACGGCGACG
GCGATTGGTCACAATTCCACCAACAACGACACAAGTTTCACGGCTTGTGAAACCCTATTTGCAAGACTAACGGTTTACATCTTGTTCATGGCCCAGAAAGAGGAGCGATT
ACCGAACAGGGACGAGCTCGCCGAGTCGCTTAATGAATTCTTCACCAGCGTGGCCGAAATGATCAAATCGGACCTTCTTGGATCAAGCAATCAGCTGGACCTTTTAGAGA
GAATGAACTTGAGGGTGGCTGAAGAGTACAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAGTTGAAGTCAAAGAGTGGTGGGTTTGATGAGTAT
ATACACCAAATTGAGAAGATAGAACATCAGGTGACCGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGTTGGAGTCCAAAGTGTTGTCTGTTTGTCA
AAACACGCCTTAATGAAGAGATTGATTTTTTTCATCTTCAAATTTCAGATCGCTTCTTTTCTTTACGTGTATGGTTCTATATTGTGGAGATCTTTTATGATATCTTATTC
ATTGGAAGTTGGAGGCGC
Protein sequenceShow/hide protein sequence
MAQKEERLPNRDELAESLNEFFTSVAEMIKSDLLGSSNQLDLLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSMLE
SKVLSVCQNTP