; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019399 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019399
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptiontRNA pseudouridine synthase
Genome locationchr11:3361468..3364069
RNA-Seq ExpressionPI0019399
SyntenyPI0019399
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0034196 - acylglycerol transport (biological process)
GO:1990052 - ER to chloroplast lipid transport (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0070300 - phosphatidic acid binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsIPR001406 - Pseudouridine synthase I, TruA
IPR020094 - Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 - Pseudouridine synthase I, TruA, C-terminal
IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02989.1 protein TRIGALACTOSYLDIACYLGLYCEROL 4 [Cucumis melo var. makuwa]1.1e-17895.69Show/hide
Query:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
        MR WAV SPVLPPISLP SPIIPSPNGA    SSSSSRGFP+AEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
Subjt:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD

Query:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK
        LHLVGASRTDKGVHAWGQVAHFVTPFNYD LESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTI+DPFQRCYTYHC YKLNYAAMK
Subjt:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK

Query:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG
        EAANYFVGKHDFSAFTNAAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPP+VVPKILASRDRKELAKYASGVPPQG
Subjt:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG

Query:  LCLVSINYKEDHLKLPSDCPGTSFG
        LCLVSINYKEDHLKLPSDCPGTS G
Subjt:  LCLVSINYKEDHLKLPSDCPGTSFG

XP_004138518.2 uncharacterized protein LOC101205797 [Cucumis sativus]7.5e-18394.1Show/hide
Query:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAE-DSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERK
        MR WAV SPVLPPISLPLSPIIPSPNGA    SSSSSRGFP+AE D+SYI EP FP FKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERK
Subjt:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAE-DSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERK

Query:  DLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAM
        DLHLVGASRTDKGVHAWGQVAHFVTPFNYD LESVHAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTI+DPFQRCYTYHC YKLNYAAM
Subjt:  DLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAM

Query:  KEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQ
        KEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPP+VVPKILASRDR+ELAKYASGVPPQ
Subjt:  KEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQ

Query:  GLCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY
        GLCLVSINYKEDHLKLPSDCPGTSFGR+RSVSKCKVPFY
Subjt:  GLCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY

XP_008458279.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X1 [Cucumis melo]2.5e-18695.56Show/hide
Query:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
        MR WAV SPVLPPISLP SPIIPSPNGA    SSSSSRGFP+AEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
Subjt:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD

Query:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK
        LHLVGASRTDKGVHAWGQVAHFVTPFNYD LESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTI+DPFQRCYTYHC YKLNYAAMK
Subjt:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK

Query:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG
        EAANYFVGKHDFSAFTNAAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPP+VVPKILASRDRKELAKYASGVPPQG
Subjt:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG

Query:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY
        LCLVSINYKEDHLKLPSDCPGTS GRSRSV KCKVPFY
Subjt:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY

XP_038875516.1 tRNA pseudouridine synthase A 1 isoform X1 [Benincasa hispida]5.9e-18092.31Show/hide
Query:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
        MR WAV SPVLPPISLPLSP IP PNGA    SSSSSRG P+AEDSS I  PPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
Subjt:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD

Query:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK
        LHLVGASRTDKGVHAWGQVAHF+TPFNYD LESVHAALNGLLPVDIRVRE+SPAAPDFHARFSTLSKVYHYKIYNG ILDPFQRCYTYHC YKLNYAAMK
Subjt:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK

Query:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG
        EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVI+MG LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PPDVVPKILAS+DR+ELAKYASGVPPQG
Subjt:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG

Query:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY
        LCLVSINYKEDHLKLPSDCPGTS GR+RSVSKCK+PFY
Subjt:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY

XP_038875517.1 tRNA pseudouridine synthase A 1 isoform X2 [Benincasa hispida]2.7e-17289.64Show/hide
Query:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
        MR WAV SPVLPPISLPLSP IP PNGA    SSSSSRG P+AEDSS I  PPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
Subjt:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD

Query:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK
        LHLVGASRTDKGVHAWGQVAHF+TPFNYD LESVHAALNGLLPVDIRVRE+SPAAPDFHARFSTLSKVYHYKIYNG ILDPFQRCYTYHC YKLNYAAMK
Subjt:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK

Query:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG
        EAANYFVGKHDFSAFTNAAHNDRVVNPVK          G LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PPDVVPKILAS+DR+ELAKYASGVPPQG
Subjt:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG

Query:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY
        LCLVSINYKEDHLKLPSDCPGTS GR+RSVSKCK+PFY
Subjt:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY

TrEMBL top hitse value%identityAlignment
A0A0A0KB67 tRNA pseudouridine synthase2.1e-17594.17Show/hide
Query:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAE-DSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERK
        MR WAV SPVLPPISLPLSPIIPSPNGA    SSSSSRGFP+AE D+SYI EP FP FKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERK
Subjt:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAE-DSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERK

Query:  DLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAM
        DLHLVGASRTDKGVHAWGQVAHFVTPFNYD LESVHAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTI+DPFQRCYTYHC YKLNYAAM
Subjt:  DLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAM

Query:  KEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQ
        KEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPP+VVPKILASRDR+ELAKYASGVPPQ
Subjt:  KEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQ

Query:  GLCLVSINYKEDHLKLPSDCPGTSFG
        GLCLVSINYKEDHLKLPSDCPGTSFG
Subjt:  GLCLVSINYKEDHLKLPSDCPGTSFG

A0A1S3C7L6 tRNA pseudouridine synthase1.2e-18695.56Show/hide
Query:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
        MR WAV SPVLPPISLP SPIIPSPNGA    SSSSSRGFP+AEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
Subjt:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD

Query:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK
        LHLVGASRTDKGVHAWGQVAHFVTPFNYD LESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTI+DPFQRCYTYHC YKLNYAAMK
Subjt:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK

Query:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG
        EAANYFVGKHDFSAFTNAAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPP+VVPKILASRDRKELAKYASGVPPQG
Subjt:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG

Query:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY
        LCLVSINYKEDHLKLPSDCPGTS GRSRSV KCKVPFY
Subjt:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY

A0A5D3BY40 Protein TRIGALACTOSYLDIACYLGLYCEROL 45.4e-17995.69Show/hide
Query:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
        MR WAV SPVLPPISLP SPIIPSPNGA    SSSSSRGFP+AEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
Subjt:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD

Query:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK
        LHLVGASRTDKGVHAWGQVAHFVTPFNYD LESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTI+DPFQRCYTYHC YKLNYAAMK
Subjt:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK

Query:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG
        EAANYFVGKHDFSAFTNAAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPP+VVPKILASRDRKELAKYASGVPPQG
Subjt:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG

Query:  LCLVSINYKEDHLKLPSDCPGTSFG
        LCLVSINYKEDHLKLPSDCPGTS G
Subjt:  LCLVSINYKEDHLKLPSDCPGTSFG

A0A6J1H621 tRNA pseudouridine synthase9.0e-16684.02Show/hide
Query:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
        M  WAV S VLP +   LSP IPS NG     SS + RGFP +EDSS +TEP FPSFKWRL+IAYDGTRYAGWQYQRSPPTIQCL+EEAL GAT+LERKD
Subjt:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD

Query:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK
        LHLVGASRTD GVHAWGQVAHF+TPFNYD L+ +HAALNGLLP DIRVREMSPA PDFHARFSTLSKVYHYKIYN  ILDPFQRCYTYHC YKLNYAAMK
Subjt:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK

Query:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG
        EAANYFVGKHDFSAF N AHNDRVVNPVKVIFRFDVIEMGAL+QLEVEGSGFLYRQVRNMV LL+QIGKEA+PPD+VPKILA+RDRKELAKY + +PPQG
Subjt:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG

Query:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY
        LCLV INYKEDHLKLPSDCPGTSFGRS SVSKCK+PFY
Subjt:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY

A0A6J1L0L1 tRNA pseudouridine synthase2.0e-16584.02Show/hide
Query:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD
        M  WAV S VLP +  PLSP IP     S  + SS+ RGFP++EDSS + EP FPSFKWRL+IAYDGTRYAGWQYQRSPPTIQCLIEEAL GAT+LERKD
Subjt:  MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKD

Query:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK
        LHLVGASRTDKGVHAWGQVAHF+TPFNYD L+ +HAALNGLLP DIRVRE+SPA PDFHARFSTLSKVYHYKIYN  ILDPFQRCYTYHC YKLNYAAMK
Subjt:  LHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMK

Query:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG
        EAANYFVGKHDFSAF N AHNDRVVNPVKVIFRFDVIEMGAL+QLEVEGSGFLYRQVRNMV LL+QIGKEA+PPDVVPKILASRDRK LAKY + +PPQG
Subjt:  EAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQG

Query:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY
        LCLV INYKEDHLKLPSDCPGTSFGRS SVSKCK+PFY
Subjt:  LCLVSINYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY

SwissProt top hitse value%identityAlignment
A3DJK8 tRNA pseudouridine synthase A5.8e-4540.56Show/hide
Query:  RLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFH
        +L+I YDGT Y GWQ Q++  T+Q  IE A+ G T    + + L+GASRTD GVHA GQVA+F+T       +    ALN +LP DI ++E      DFH
Subjt:  RLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFH

Query:  ARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRN
        AR+    K Y Y IYN        R  TYH ++KL++ +M+ AA+YF+G HDFSAF ++  + +    V+ I    +     +V+ E+ G GFLY  VR 
Subjt:  ARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRN

Query:  MVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY
        +VG L+++G   +  D +P+I+ SR RK   + A   P +GL LV + Y
Subjt:  MVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY

A4J151 tRNA pseudouridine synthase A4.9e-4440.24Show/hide
Query:  RLLIAYDGTRYAGWQYQRSP--PTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPD
        +L +AYDGT Y G+Q QR     TIQ  +E+AL   + + +  + ++GA RTD GVHA GQV +F +       E    ALN LLP DI+V +      D
Subjt:  RLLIAYDGTRYAGWQYQRSP--PTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPD

Query:  FHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV
        FHARFS ++K Y Y IY+  ++ PF R Y YH   +L+  AM+E A Y +G +DF +F   A    V + ++ I+R D+IE   ++ L + G+GFLY  V
Subjt:  FHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY
        R + G L+ IG   + P+ + KI+ S++R      A   PPQGLCL+ + Y
Subjt:  RNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY

B1I1B5 tRNA pseudouridine synthase A3.6e-4743.43Show/hide
Query:  RLLIAYDGTRYAGWQYQRSP--PTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPD
        RL +AYDGT Y G+Q Q     PTIQ  +E  L    +L    L + GASRTD GVHA GQV +FVT       E + AALNG+LP DI   +      D
Subjt:  RLLIAYDGTRYAGWQYQRSP--PTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPD

Query:  FHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV
        FHAR+S ++K Y Y +YN  +  PFQR Y+ H    L+  AM+ AA + +G+HDFS F  A     V + V+ + R D+     LV+L     GFLY  V
Subjt:  FHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY
        R M G L+++G E L P+ +P I+AS DR   A+    VPP GLCL  + Y
Subjt:  RNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY

Q6MEE7 tRNA pseudouridine synthase A 11.2e-5341.18Show/hide
Query:  WRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDF
        ++L IAYDGT Y+GWQ Q +  +IQ  I+EAL     L+++ + LVG+ RTD GVHA GQVAHF    +Y  L  +H +LNGLLP DIR++ + P +P F
Subjt:  WRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDF

Query:  HARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVV-NPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV
        H+++S + K YHY ++   ++DPFQR Y++H   K++   +K+AA  F G HDF++F N AH      NPV+ ++R D+      ++LE EG GFLY+ V
Subjt:  HARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVV-NPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDH
        RN+VG L+ +       + + +I A+++R++ +  A   PP+GL L+ + Y+ ++
Subjt:  RNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDH

Q8R7Y7 tRNA pseudouridine synthase A1.4e-4644.35Show/hide
Query:  LLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHA
        L+I YDGT Y GWQYQ++  T+Q ++E+A+    K+  + ++L+G+SRTD GVHA  QVA+F T       E +  ALN +LP D+ V +       FHA
Subjt:  LLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHA

Query:  RFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNM
        R+S  SK Y Y I N     P  R Y +H  Y L+  AMK+AA +F G HDFSAF   A  ++ VNPVK IF   V + G L+++EVE  GFLY  VR +
Subjt:  RFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNM

Query:  VGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY
        VG LV +G   +    +P I+ S+DR    K     PPQGL LV I Y
Subjt:  VGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY

Arabidopsis top hitse value%identityAlignment
AT1G34150.1 Pseudouridine synthase family protein2.9e-1530.19Show/hide
Query:  LLIAYDGTRYAGWQYQ-RSPPTIQCLIEEALIGATKL--ERKDLHLVGASRTDKGVHAWGQV------AHFVTPFNYDCLESVHA------------ALN
        L I Y G R+ G+  + +  P+I+  + +AL     L  ++KD       RTDKGV + GQV      +   +P   D    V+              LN
Subjt:  LLIAYDGTRYAGWQYQ-RSPPTIQCLIEEALIGATKL--ERKDLHLVGASRTDKGVHAWGQV------AHFVTPFNYDCLESVHA------------ALN

Query:  GLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAF-----TNAAHNDRVVNPVKVIFRF
          LP DIRV   SPA  DFHARFS  ++ Y Y                +     LN +AM  A   F+G+HDF  F      N     R V   +V    
Subjt:  GLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAF-----TNAAHNDRVVNPVKVIFRF

Query:  DVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKY--ASGVP
        +  E   L    + GS FL+ Q+R MV +L  IG+     DV+  +L ++      +Y  AS +P
Subjt:  DVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKY--ASGVP

AT3G06950.1 Pseudouridine synthase family protein4.8e-11964.46Show/hide
Query:  SPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGAS
        +P LPP SL  +  + SP   S ++ +SS +      DS         ++KWRL+IAYDGTR+AGWQYQ SPPTIQ ++E+ALI  T+L RK+L L+GA 
Subjt:  SPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGAS

Query:  RTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFV
        RTD GVHAWGQVAHFVTPFNY  L+S HAALNGLLP DIRVRE+S A P+FHARFS  SKVY Y+IYN T +DPFQR + YHCAYKLN + M+EAAN FV
Subjt:  RTDKGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFV

Query:  GKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYAS-GVPPQGLCLVSI
        GKHDFSAF NA   D V +P+K I RFDVI+MG+L+QLEVEGSGFLYRQVRNMV LL+QIGKEAL  D+VP IL ++DR+ LAKY S    P GLCLVS+
Subjt:  GKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYAS-GVPPQGLCLVSI

Query:  NYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY
         YKEDHLKLP DCP TS GR  +++KCK+PFY
Subjt:  NYKEDHLKLPSDCPGTSFGRSRSVSKCKVPFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCCTGGGCGGTGAGTTCGCCTGTTCTTCCTCCAATTTCCCTTCCCCTTTCACCAATCATTCCATCTCCAAATGGCGCTTCATCTTCATCTTCATCTTCCTCCAG
TCGTGGATTCCCGGATGCGGAGGATTCTTCTTATATCACAGAGCCCCCTTTTCCCAGCTTCAAATGGCGGTTGCTCATCGCTTATGACGGTACTCGATATGCAGGCTGGC
AATATCAGAGGTCACCACCCACTATCCAGTGCCTCATTGAAGAAGCCTTAATCGGAGCAACAAAGCTTGAAAGGAAGGATCTTCATTTAGTTGGTGCAAGCAGAACAGAT
AAAGGAGTTCATGCCTGGGGTCAGGTGGCTCACTTTGTTACCCCATTTAACTACGATTGCTTGGAAAGCGTTCATGCTGCACTGAATGGTCTTCTTCCTGTGGATATAAG
AGTTCGAGAGATGAGTCCTGCTGCACCCGACTTTCATGCTCGGTTTTCTACATTAAGCAAGGTTTATCACTACAAGATATATAATGGCACAATCTTGGATCCATTTCAGC
GTTGCTACACTTACCACTGTGCTTATAAACTCAACTATGCAGCCATGAAAGAAGCTGCAAATTATTTCGTCGGAAAGCATGATTTTTCTGCTTTTACAAATGCAGCTCAT
AATGATCGAGTGGTAAATCCAGTGAAGGTCATTTTCCGTTTTGATGTGATAGAAATGGGAGCTCTTGTGCAGCTAGAAGTTGAGGGTTCTGGGTTCTTATATAGACAAGT
TCGGAATATGGTTGGCTTGTTGGTTCAAATTGGAAAGGAAGCACTTCCTCCTGATGTTGTTCCTAAGATTTTGGCGTCTCGAGATCGCAAAGAGCTTGCCAAGTATGCTT
CGGGCGTTCCTCCTCAGGGACTGTGTCTTGTGAGTATTAATTATAAAGAGGACCATTTAAAGCTTCCATCTGATTGCCCTGGGACTAGTTTTGGTAGGAGTCGTAGTGTG
AGCAAATGTAAAGTCCCTTTTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCCTGGGCGGTGAGTTCGCCTGTTCTTCCTCCAATTTCCCTTCCCCTTTCACCAATCATTCCATCTCCAAATGGCGCTTCATCTTCATCTTCATCTTCCTCCAG
TCGTGGATTCCCGGATGCGGAGGATTCTTCTTATATCACAGAGCCCCCTTTTCCCAGCTTCAAATGGCGGTTGCTCATCGCTTATGACGGTACTCGATATGCAGGCTGGC
AATATCAGAGGTCACCACCCACTATCCAGTGCCTCATTGAAGAAGCCTTAATCGGAGCAACAAAGCTTGAAAGGAAGGATCTTCATTTAGTTGGTGCAAGCAGAACAGAT
AAAGGAGTTCATGCCTGGGGTCAGGTGGCTCACTTTGTTACCCCATTTAACTACGATTGCTTGGAAAGCGTTCATGCTGCACTGAATGGTCTTCTTCCTGTGGATATAAG
AGTTCGAGAGATGAGTCCTGCTGCACCCGACTTTCATGCTCGGTTTTCTACATTAAGCAAGGTTTATCACTACAAGATATATAATGGCACAATCTTGGATCCATTTCAGC
GTTGCTACACTTACCACTGTGCTTATAAACTCAACTATGCAGCCATGAAAGAAGCTGCAAATTATTTCGTCGGAAAGCATGATTTTTCTGCTTTTACAAATGCAGCTCAT
AATGATCGAGTGGTAAATCCAGTGAAGGTCATTTTCCGTTTTGATGTGATAGAAATGGGAGCTCTTGTGCAGCTAGAAGTTGAGGGTTCTGGGTTCTTATATAGACAAGT
TCGGAATATGGTTGGCTTGTTGGTTCAAATTGGAAAGGAAGCACTTCCTCCTGATGTTGTTCCTAAGATTTTGGCGTCTCGAGATCGCAAAGAGCTTGCCAAGTATGCTT
CGGGCGTTCCTCCTCAGGGACTGTGTCTTGTGAGTATTAATTATAAAGAGGACCATTTAAAGCTTCCATCTGATTGCCCTGGGACTAGTTTTGGTAGGAGTCGTAGTGTG
AGCAAATGTAAAGTCCCTTTTTATTGA
Protein sequenceShow/hide protein sequence
MRSWAVSSPVLPPISLPLSPIIPSPNGASSSSSSSSSRGFPDAEDSSYITEPPFPSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTD
KGVHAWGQVAHFVTPFNYDCLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTILDPFQRCYTYHCAYKLNYAAMKEAANYFVGKHDFSAFTNAAH
NDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPSDCPGTSFGRSRSV
SKCKVPFY