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PI0019401 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019401
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:7843443..7844006
RNA-Seq ExpressionPI0019401
SyntenyPI0019401
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.6e-3177.78Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
        MTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+VN++RKYDPH NTYN+GWRDNPNLRWGNDNQ+ +QA S+S+NQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.7e-3074.07Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
        MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+VN+++KYDPH NTYN+GWRDNPNLRWGNDNQ+ +QA  +S+NQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.7e-3076.54Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
        MTTLLTSFVQG   KV KCGVCGLVGHPNDKC  ++E+VN++R+YDPHSNTYN+GWRDNPNLRWGNDNQ+ +QA S+S+NQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
KAA0062012.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.0e-3075.31Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
        MTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+VN++R+YDPH NTYN+ WRDNPNLRWGNDNQ+ +QA S+S+NQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]8.7e-3074.07Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
        MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+VN+++KYDPH NTYN+GWRDNPNLRWGNDNQ+ +QA  +S+NQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
TrEMBL top hitse value%identityAlignment
A0A1S4E3R2 uncharacterized protein LOC1079919104.2e-3074.07Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
        MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+VN+++KYDPH NTYN+GWRDNPNLRWGNDNQ+ +QA  +S+NQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
A0A5A7V0Q7 Retrotransposon gag protein4.2e-3076.54Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
        MTTLLTSFVQG   KV KCGVCGLVGHPNDKC  ++E+VN++R+YDPHSNTYN+GWRDNPNLRWGNDNQ+ +QA S+S+NQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
A0A5A7V1C6 Retrotransposon gag protein1.5e-3075.31Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
        MTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+VN++R+YDPH NTYN+ WRDNPNLRWGNDNQ+ +QA S+S+NQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
A0A5D3CRR8 Retrotransposon gag protein7.7e-3277.78Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
        MTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+VN++RKYDPH NTYN+GWRDNPNLRWGNDNQ+ +QA S+S+NQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
A0A5D3DCG3 Retrotransposon gag protein4.2e-3074.07Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
        MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+VN+++KYDPH NTYN+GWRDNPNLRWGNDNQ+ +QA  +S+NQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACTCTATTAACTTCCTTTGTGCAAGGTGGATCTGTGAAAGTTGCAAAGTGCGGGGTATGCGGTCTAGTTGGACATCCTAATGACAAGTGTCCTGACCTAGTGGA
AGAGGTAAATGTCATTAGGAAGTACGATCCTCATAGCAATACTTACAACGCCGGTTGGAGAGACAACCCTAATCTTAGATGGGGAAACGACAACCAAAGACCCTCGCAAG
CAACCTCCTCTTCAAACAATCAAGCCTTTGTGAAAACGCATCGTGCGACGCTTGTTTCTTCTGTCCGAAGCGCGATGACACTTGCTTGGAGCACTGCGGCGCTTGGTTTG
GGAGTCACGATGCTTAAGCCTTTGTTGCTTTCATTCTTCAAGCGACGCACAACGGTGCTCCAAGACGCACTTCTTTTTCAAAATTACAACAATACCCTCAAACTTGTTTT
GACCTGTTCTTGCTCGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTACTCTATTAACTTCCTTTGTGCAAGGTGGATCTGTGAAAGTTGCAAAGTGCGGGGTATGCGGTCTAGTTGGACATCCTAATGACAAGTGTCCTGACCTAGTGGA
AGAGGTAAATGTCATTAGGAAGTACGATCCTCATAGCAATACTTACAACGCCGGTTGGAGAGACAACCCTAATCTTAGATGGGGAAACGACAACCAAAGACCCTCGCAAG
CAACCTCCTCTTCAAACAATCAAGCCTTTGTGAAAACGCATCGTGCGACGCTTGTTTCTTCTGTCCGAAGCGCGATGACACTTGCTTGGAGCACTGCGGCGCTTGGTTTG
GGAGTCACGATGCTTAAGCCTTTGTTGCTTTCATTCTTCAAGCGACGCACAACGGTGCTCCAAGACGCACTTCTTTTTCAAAATTACAACAATACCCTCAAACTTGTTTT
GACCTGTTCTTGCTCGTTTTAG
Protein sequenceShow/hide protein sequence
MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQAFVKTHRATLVSSVRSAMTLAWSTAALGL
GVTMLKPLLLSFFKRRTTVLQDALLFQNYNNTLKLVLTCSCSF