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PI0019405 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019405
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr01:12847280..12848629
RNA-Seq ExpressionPI0019405
SyntenyPI0019405
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]4.6e-6060.19Show/hide
Query:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND
        +VG ++G+DM  +QI+IIYRHPNLT SG +RF+ FPI N Q M TMFSIA+  PNMV LYV VS     INLN EP  ++ ++   ++P S+    P+  
Subjt:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND

Query:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP
         EEMVA NEY +FRTETDDEFEE DFDG E+E+PSNTFT LDM+ +D+I+EHDPI+ P+V D++ +Y GMICE+KE  QHMVKCFAIK+H+P  VVESTP
Subjt:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP

Query:  TIWAIR
        T W IR
Subjt:  TIWAIR

KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]3.9e-5960.19Show/hide
Query:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND
        +VG ++G+DM  +QI+IIYRHPNLT SG +RFM FPI N Q M TMFSIA+S PNMV LYV VS     INLN EP  ++ ++   ++P S+     +  
Subjt:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND

Query:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP
         EEMVA NEY +FRTETDDEFEE DFDG E+E+PSNTFT LDM+ +D I+EHDPI+ P+V D++ +Y GMICE+K+  QHMVKCFAIK+H+P  VVESTP
Subjt:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP

Query:  TIWAIR
        T W IR
Subjt:  TIWAIR

KAA0040476.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.4e-5658.25Show/hide
Query:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND
        +VG ++G+DM  +QI+IIYRH NLT SG +RFM FPI N Q M TMFSI +   NMV LYV VS     INLN EP  ++ ++   ++P S     P+  
Subjt:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND

Query:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP
         EEMVA NEY +FRTETDDEFEE DFDG E+E+PSN FT LDM+ +D I+EHDPI+ P+V D++ +Y GMICE+KE  QHM+KCFAIK+H+P  VVESTP
Subjt:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP

Query:  TIWAIR
        T W IR
Subjt:  TIWAIR

KAA0041167.1 uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa]1.7e-9478.02Show/hide
Query:  MADKMLRFMLFMNGNIIDGVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMS
        MADK+L FMLF+NGN+IDG DG+DYDQPACGGFTISVNSGIVF+QF EIVGS++GID+RI+ I+IIYRHP+LTPSGLIRFM FPIPN QAMKTMFSIAM 
Subjt:  MADKMLRFMLFMNGNIIDGVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMS

Query:  IPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPINDNEEMVANNEYRDFRTETD---DEFEEFDFDGREHELPSNTFTQLDMDVIDSI
        I NMV LYVNVSR SLDINLNS+ F Q ED+TQ+I P+SE V S + D+EEM+ANN+  DFRTE D   DEFEEFDFDGREHELPSNT TQ+DMDVIDSI
Subjt:  IPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPINDNEEMVANNEYRDFRTETD---DEFEEFDFDGREHELPSNTFTQLDMDVIDSI

Query:  REHDPIVAPVVVDSSDVYKGMICEDKETFQHM
        REHDPIVAP+VVD+S++YKGMIC+DKET QHM
Subjt:  REHDPIVAPVVVDSSDVYKGMICEDKETFQHM

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.0e-5960.19Show/hide
Query:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND
        +VG ++G+DM  +QI+IIYRHPNLT SG +RFM FPI N Q M TMFSIA+  PNMV LYV VS     INLN EP  ++ ++   ++P S+    P+  
Subjt:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND

Query:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP
         EEMVA NEY +FRTETDDEFEE DFDG E+E+PSNTFT LDM+ +D I+EHDPI+ P+V D++ +Y GMICE+K+  QHMVKCFAIK+H+P  VVESTP
Subjt:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP

Query:  TIWAIR
        T W IR
Subjt:  TIWAIR

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein2.2e-6060.19Show/hide
Query:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND
        +VG ++G+DM  +QI+IIYRHPNLT SG +RF+ FPI N Q M TMFSIA+  PNMV LYV VS     INLN EP  ++ ++   ++P S+    P+  
Subjt:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND

Query:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP
         EEMVA NEY +FRTETDDEFEE DFDG E+E+PSNTFT LDM+ +D+I+EHDPI+ P+V D++ +Y GMICE+KE  QHMVKCFAIK+H+P  VVESTP
Subjt:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP

Query:  TIWAIR
        T W IR
Subjt:  TIWAIR

A0A5A7T1X8 SWIM-type domain-containing protein1.9e-5960.19Show/hide
Query:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND
        +VG ++G+DM  +QI+IIYRHPNLT SG +RFM FPI N Q M TMFSIA+S PNMV LYV VS     INLN EP  ++ ++   ++P S+     +  
Subjt:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND

Query:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP
         EEMVA NEY +FRTETDDEFEE DFDG E+E+PSNTFT LDM+ +D I+EHDPI+ P+V D++ +Y GMICE+K+  QHMVKCFAIK+H+P  VVESTP
Subjt:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP

Query:  TIWAIR
        T W IR
Subjt:  TIWAIR

A0A5A7THR5 Uncharacterized protein8.1e-9578.02Show/hide
Query:  MADKMLRFMLFMNGNIIDGVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMS
        MADK+L FMLF+NGN+IDG DG+DYDQPACGGFTISVNSGIVF+QF EIVGS++GID+RI+ I+IIYRHP+LTPSGLIRFM FPIPN QAMKTMFSIAM 
Subjt:  MADKMLRFMLFMNGNIIDGVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMS

Query:  IPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPINDNEEMVANNEYRDFRTETD---DEFEEFDFDGREHELPSNTFTQLDMDVIDSI
        I NMV LYVNVSR SLDINLNS+ F Q ED+TQ+I P+SE V S + D+EEM+ANN+  DFRTE D   DEFEEFDFDGREHELPSNT TQ+DMDVIDSI
Subjt:  IPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPINDNEEMVANNEYRDFRTETD---DEFEEFDFDGREHELPSNTFTQLDMDVIDSI

Query:  REHDPIVAPVVVDSSDVYKGMICEDKETFQHM
        REHDPIVAP+VVD+S++YKGMIC+DKET QHM
Subjt:  REHDPIVAPVVVDSSDVYKGMICEDKETFQHM

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein5.0e-6060.19Show/hide
Query:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND
        +VG ++G+DM  +QI+IIYRHPNLT SG +RFM FPI N Q M TMFSIA+  PNMV LYV VS     INLN EP  ++ ++   ++P S+    P+  
Subjt:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND

Query:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP
         EEMVA NEY +FRTETDDEFEE DFDG E+E+PSNTFT LDM+ +D I+EHDPI+ P+V D++ +Y GMICE+K+  QHMVKCFAIK+H+P  VVESTP
Subjt:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP

Query:  TIWAIR
        T W IR
Subjt:  TIWAIR

A0A5D3DIM2 Serine/threonine-protein phosphatase 7 long form-like protein6.7e-5758.25Show/hide
Query:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND
        +VG ++G+DM  +QI+IIYRH NLT SG +RFM FPI N Q M TMFSI +   NMV LYV VS     INLN EP  ++ ++   ++P S     P+  
Subjt:  IVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLYVNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPIND

Query:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP
         EEMVA NEY +FRTETDDEFEE DFDG E+E+PSN FT LDM+ +D I+EHDPI+ P+V D++ +Y GMICE+KE  QHM+KCFAIK+H+P  VVESTP
Subjt:  NEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGMICEDKETFQHMVKCFAIKNHSP--VVESTP

Query:  TIWAIR
        T W IR
Subjt:  TIWAIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGCGGACAAAATGTTGAGATTTATGTTGTTTATGAATGGAAATATAATTGATGGTGTCGATGGAGTTGATTATGACCAACCAGCTTGTGGAGGTTTTACCAT
AAGTGTGAACAGTGGAATTGTGTTTCAACAATTCACTGAAATCGTAGGATCGGCAATTGGTATAGATATGCGCATAAACCAAATAAAAATTATATATAGACATCCAAATC
TAACCCCCTCGGGGTTAATAAGATTTATGCTATTTCCCATACCAAATGTACAAGCAATGAAAACTATGTTTTCAATTGCAATGTCAATCCCGAACATGGTTCGTCTATAT
GTGAATGTGAGCAGGACGAGTTTGGATATAAACTTAAATTCTGAACCATTTGATCAGTTTGAAGACCAAACTCAGATTATTGACCCTAACTCTGAACCAGTTACATCGCC
AATAAACGACAATGAAGAAATGGTAGCTAACAATGAATATAGGGACTTTCGAACAGAAACAGACGATGAGTTTGAAGAGTTTGACTTTGACGGTCGTGAACATGAATTAC
CATCAAATACATTCACTCAATTAGATATGGATGTTATAGACAGTATTCGTGAGCACGACCCAATTGTAGCCCCCGTAGTTGTTGACAGTTCAGACGTGTACAAGGGAATG
ATATGTGAAGATAAAGAAACATTTCAACATATGGTGAAATGTTTTGCTATTAAGAATCACTCACCGGTAGTGGAATCAACACCAACTATTTGGGCAATTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGGCGGACAAAATGTTGAGATTTATGTTGTTTATGAATGGAAATATAATTGATGGTGTCGATGGAGTTGATTATGACCAACCAGCTTGTGGAGGTTTTACCAT
AAGTGTGAACAGTGGAATTGTGTTTCAACAATTCACTGAAATCGTAGGATCGGCAATTGGTATAGATATGCGCATAAACCAAATAAAAATTATATATAGACATCCAAATC
TAACCCCCTCGGGGTTAATAAGATTTATGCTATTTCCCATACCAAATGTACAAGCAATGAAAACTATGTTTTCAATTGCAATGTCAATCCCGAACATGGTTCGTCTATAT
GTGAATGTGAGCAGGACGAGTTTGGATATAAACTTAAATTCTGAACCATTTGATCAGTTTGAAGACCAAACTCAGATTATTGACCCTAACTCTGAACCAGTTACATCGCC
AATAAACGACAATGAAGAAATGGTAGCTAACAATGAATATAGGGACTTTCGAACAGAAACAGACGATGAGTTTGAAGAGTTTGACTTTGACGGTCGTGAACATGAATTAC
CATCAAATACATTCACTCAATTAGATATGGATGTTATAGACAGTATTCGTGAGCACGACCCAATTGTAGCCCCCGTAGTTGTTGACAGTTCAGACGTGTACAAGGGAATG
ATATGTGAAGATAAAGAAACATTTCAACATATGGTGAAATGTTTTGCTATTAAGAATCACTCACCGGTAGTGGAATCAACACCAACTATTTGGGCAATTCGATAA
Protein sequenceShow/hide protein sequence
MKMADKMLRFMLFMNGNIIDGVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAIGIDMRINQIKIIYRHPNLTPSGLIRFMLFPIPNVQAMKTMFSIAMSIPNMVRLY
VNVSRTSLDINLNSEPFDQFEDQTQIIDPNSEPVTSPINDNEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMDVIDSIREHDPIVAPVVVDSSDVYKGM
ICEDKETFQHMVKCFAIKNHSPVVESTPTIWAIR