; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019413 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019413
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTRUD domain-containing protein
Genome locationchr10:6400044..6401500
RNA-Seq ExpressionPI0019413
SyntenyPI0019413
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057401.1 hypothetical protein E6C27_scaffold280G002750 [Cucumis melo var. makuwa]5.8e-7251.6Show/hide
Query:  IRVLQVMKNEEGEAPEIDLEWGFIKEAGESLNFMRNPFVFIRRKSLGKFSALCSPRKPPVLPHTVASSSEVNPQAIVNIDTTLKWKEKAEVIPVQCNLSS
        IRV QVMK+EEGE PE+D E GFIK+AGE  NF RN FVFI RKS GKF ALCSP KPPV   +VASSSE NPQ                          
Subjt:  IRVLQVMKNEEGEAPEIDLEWGFIKEAGESLNFMRNPFVFIRRKSLGKFSALCSPRKPPVLPHTVASSSEVNPQAIVNIDTTLKWKEKAEVIPVQCNLSS

Query:  SKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILSPNHKLKALPALEPVSSLSSSNQSLSMAISDSISSKDSLNNVIKQAAREANKLEPSQKLQI
                                                                                                      S KL I
Subjt:  SKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILSPNHKLKALPALEPVSSLSSSNQSLSMAISDSISSKDSLNNVIKQAAREANKLEPSQKLQI

Query:  GASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQAHCVSLVRGTS
        GASL HGLKKDKKLKSSK PKR YPLFKP  KQFSRK+TSFNNSWTKITNPDLLEEGCVK Q+PGIVQN+ V+ S SLNHINHSSGSSQAH VSLVRGT 
Subjt:  GASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQAHCVSLVRGTS

Query:  IPQDLEEDSVISVSSEELERDEDDEFKNS-EFLEDMNKALGLL
        IP D EE+SV+SVSSE+LERDEDDE K S EF EDMNKALGLL
Subjt:  IPQDLEEDSVISVSSEELERDEDDEFKNS-EFLEDMNKALGLL

KAA0062445.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.7e-1046.32Show/hide
Query:  RKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQ----------AHCVSLVRGTSIPQDLEEDSVISVSSEELER
        +K+TSFNNSWTK TNPDLLE  CVK Q+PG+ QN    L F     +HS  +SQ           HC          +D  E+S+ S+SSEELER
Subjt:  RKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQ----------AHCVSLVRGTSIPQDLEEDSVISVSSEELER

TYK27438.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.2e-1046.81Show/hide
Query:  KKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQ----------AHCVSLVRGTSIPQDLEEDSVISVSSEELER
        K+TSFNNSWTK TNPDLLE  CVK Q+PG+ QN    L F     +HS  +SQ           HC          +D  E+S+ S+SSEELER
Subjt:  KKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQ----------AHCVSLVRGTSIPQDLEEDSVISVSSEELER

TYK28792.1 pseudouridylate synthase 7-like protein isoform X1 [Cucumis melo var. makuwa]1.3e-0788.57Show/hide
Query:  EFFNPIDLIRVLQVMKNEEGEAPEIDLEWGFIKEA
        +FFNPIDLIRVLQVMK+EEGEAPEID EWGFIK+A
Subjt:  EFFNPIDLIRVLQVMKNEEGEAPEIDLEWGFIKEA

TYK28793.1 hypothetical protein E5676_scaffold403G001580 [Cucumis melo var. makuwa]5.7e-3549.01Show/hide
Query:  NLSSSKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILSPNHKLK---ALPALEPVSSLSSSNQSLSMAISDSISSKDSLNNVIKQA--AREANK
        +L SSKSKGV+KK+K  KSVGIPPKAHQEDNS+VAF QPGLILSP+HKLK   ALPALE  SSLSSSNQSLSMA SDS SSK SLNNVIKQA  AREANK
Subjt:  NLSSSKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILSPNHKLK---ALPALEPVSSLSSSNQSLSMAISDSISSKDSLNNVIKQA--AREANK

Query:  LEPSQKLQIGASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQAH
        LEPSQKL I                                                                                           
Subjt:  LEPSQKLQIGASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQAH

Query:  CVSLVRGTSIPQDLEEDSVISVSSEELERDEDDEFKNS-EFLEDMNKALGLLL
              GT IPQ+L+E+SV SV SEELER EDDE KNS EF ED NKA GLLL
Subjt:  CVSLVRGTSIPQDLEEDSVISVSSEELERDEDDEFKNS-EFLEDMNKALGLLL

TrEMBL top hitse value%identityAlignment
A0A0A0KHK4 Uncharacterized protein1.4e-1839.09Show/hide
Query:  VQCNLSSSKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILSPNHKLKALPALEPVSSLSSSNQSLSMAISDSISSKDSL-NNVIKQAAREANKL
        +Q NLS+S  KG  KKL+            ++D+S         + + +  L +    +  +SL  SNQS +       SSK++L NN++K  ++  +K+
Subjt:  VQCNLSSSKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILSPNHKLKALPALEPVSSLSSSNQSLSMAISDSISSKDSL-NNVIKQAAREANKL

Query:  EPSQKLQIGASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQ
        + S KL    SL   +KK+ K  SSK  +R   LFK  HK F+RKKTSF NSWTKITNPD+LE  CVK Q+PG+ QNR   L      I+ S  +SQ
Subjt:  EPSQKLQIGASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQ

A0A0A0LY46 TRUD domain-containing protein1.8e-5868.84Show/hide
Query:  IRRKSLGKFSALCSPRKPPVLPHTVASSSEVNPQAIVNIDTTLKWKEKAEVIPVQCNLSSSKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILS
        ++ KS GKF ALC   KP V PH VASS EVNPQ  VN D  LK KE                          KSV I PKAHQEDNS+VAFIQPGLILS
Subjt:  IRRKSLGKFSALCSPRKPPVLPHTVASSSEVNPQAIVNIDTTLKWKEKAEVIPVQCNLSSSKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILS

Query:  PNHKLKALPALEPVSSLSSSNQSLSMAISDSISSKDSLNNVIKQAAREANKLEPSQKLQIGASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTS
        P+ KLKALPALE VSSLSSS+  LSM  SDS SSK SLN+VIKQAAREANKLEP QKL IGASL HGLK+ KKLKSSK PKR YPLFKPL KQFSRKKT 
Subjt:  PNHKLKALPALEPVSSLSSSNQSLSMAISDSISSKDSLNNVIKQAAREANKLEPSQKLQIGASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTS

Query:  FNNSWTKITNPDLLE
        FNNSWTKITNPDLLE
Subjt:  FNNSWTKITNPDLLE

A0A5A7UV76 Uncharacterized protein2.8e-7251.6Show/hide
Query:  IRVLQVMKNEEGEAPEIDLEWGFIKEAGESLNFMRNPFVFIRRKSLGKFSALCSPRKPPVLPHTVASSSEVNPQAIVNIDTTLKWKEKAEVIPVQCNLSS
        IRV QVMK+EEGE PE+D E GFIK+AGE  NF RN FVFI RKS GKF ALCSP KPPV   +VASSSE NPQ                          
Subjt:  IRVLQVMKNEEGEAPEIDLEWGFIKEAGESLNFMRNPFVFIRRKSLGKFSALCSPRKPPVLPHTVASSSEVNPQAIVNIDTTLKWKEKAEVIPVQCNLSS

Query:  SKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILSPNHKLKALPALEPVSSLSSSNQSLSMAISDSISSKDSLNNVIKQAAREANKLEPSQKLQI
                                                                                                      S KL I
Subjt:  SKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILSPNHKLKALPALEPVSSLSSSNQSLSMAISDSISSKDSLNNVIKQAAREANKLEPSQKLQI

Query:  GASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQAHCVSLVRGTS
        GASL HGLKKDKKLKSSK PKR YPLFKP  KQFSRK+TSFNNSWTKITNPDLLEEGCVK Q+PGIVQN+ V+ S SLNHINHSSGSSQAH VSLVRGT 
Subjt:  GASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQAHCVSLVRGTS

Query:  IPQDLEEDSVISVSSEELERDEDDEFKNS-EFLEDMNKALGLL
        IP D EE+SV+SVSSE+LERDEDDE K S EF EDMNKALGLL
Subjt:  IPQDLEEDSVISVSSEELERDEDDEFKNS-EFLEDMNKALGLL

A0A5A7V992 Putative mitochondrial protein8.1e-1146.32Show/hide
Query:  RKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQ----------AHCVSLVRGTSIPQDLEEDSVISVSSEELER
        +K+TSFNNSWTK TNPDLLE  CVK Q+PG+ QN    L F     +HS  +SQ           HC          +D  E+S+ S+SSEELER
Subjt:  RKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQ----------AHCVSLVRGTSIPQDLEEDSVISVSSEELER

A0A5D3DYH4 Uncharacterized protein2.8e-3549.01Show/hide
Query:  NLSSSKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILSPNHKLK---ALPALEPVSSLSSSNQSLSMAISDSISSKDSLNNVIKQA--AREANK
        +L SSKSKGV+KK+K  KSVGIPPKAHQEDNS+VAF QPGLILSP+HKLK   ALPALE  SSLSSSNQSLSMA SDS SSK SLNNVIKQA  AREANK
Subjt:  NLSSSKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILSPNHKLK---ALPALEPVSSLSSSNQSLSMAISDSISSKDSLNNVIKQA--AREANK

Query:  LEPSQKLQIGASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQAH
        LEPSQKL I                                                                                           
Subjt:  LEPSQKLQIGASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQAH

Query:  CVSLVRGTSIPQDLEEDSVISVSSEELERDEDDEFKNS-EFLEDMNKALGLLL
              GT IPQ+L+E+SV SV SEELER EDDE KNS EF ED NKA GLLL
Subjt:  CVSLVRGTSIPQDLEEDSVISVSSEELERDEDDEFKNS-EFLEDMNKALGLLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATTGGAAGAACTTATTGAACTACCTGGAAAATGGCAAGCATTTGGAATTTTTTAATCCTATTGATTTGATTAGAGTTTTACAAGTTATGAAGAATGAAGAAGG
TGAAGCTCCAGAGATTGATCTAGAATGGGGTTTCATTAAAGAAGCAGGAGAATCGTTAAATTTCATGAGGAACCCGTTTGTCTTCATACGAAGAAAATCTCTAGGGAAGT
TTTCGGCTCTGTGCTCGCCGCGAAAACCTCCAGTTCTACCTCATACGGTGGCCAGTTCATCGGAAGTTAATCCTCAGGCTATTGTGAACATAGATACGACATTAAAGTGG
AAAGAGAAAGCAGAAGTTATTCCTGTGCAATGCAACCTTTCATCTTCCAAGAGTAAAGGCGTGAATAAGAAACTTAAAATTTGGAAGTCTGTTGGAATCCCTCCAAAAGC
CCACCAAGAAGACAACTCAAATGTAGCATTTATTCAGCCAGGCCTTATTCTCTCTCCAAACCACAAATTAAAAGCCCTCCCTGCATTGGAACCAGTATCTTCTCTGTCCT
CTTCAAATCAGTCATTAAGTATGGCTATTTCTGACTCTATATCTTCTAAAGACAGTCTGAATAATGTTATTAAGCAAGCTGCACGAGAAGCAAACAAACTTGAGCCATCT
CAAAAGTTACAGATTGGTGCATCATTGAGTCATGGCTTGAAAAAGGATAAGAAGCTCAAGAGTTCGAAAGCCCCAAAAAGAATTTATCCTTTGTTCAAACCATTACACAA
GCAATTTTCCAGAAAAAAGACATCTTTCAATAATTCTTGGACAAAGATCACAAATCCAGACTTGTTAGAGGAGGGTTGTGTAAAGTTTCAAATCCCTGGAATTGTCCAAA
ACAGGTTAGTCTTATTGTCCTTTTCTTTAAATCACATCAATCATTCAAGTGGAAGTTCTCAAGCACATTGTGTTTCTCTTGTGCGAGGTACAAGTATTCCACAAGACTTG
GAAGAAGATTCAGTGATTAGTGTAAGCAGTGAAGAGCTTGAAAGGGATGAGGATGATGAATTTAAAAATTCTGAGTTCCTGGAAGATATGAACAAGGCTTTAGGCCTCTT
ATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATTGGAAGAACTTATTGAACTACCTGGAAAATGGCAAGCATTTGGAATTTTTTAATCCTATTGATTTGATTAGAGTTTTACAAGTTATGAAGAATGAAGAAGG
TGAAGCTCCAGAGATTGATCTAGAATGGGGTTTCATTAAAGAAGCAGGAGAATCGTTAAATTTCATGAGGAACCCGTTTGTCTTCATACGAAGAAAATCTCTAGGGAAGT
TTTCGGCTCTGTGCTCGCCGCGAAAACCTCCAGTTCTACCTCATACGGTGGCCAGTTCATCGGAAGTTAATCCTCAGGCTATTGTGAACATAGATACGACATTAAAGTGG
AAAGAGAAAGCAGAAGTTATTCCTGTGCAATGCAACCTTTCATCTTCCAAGAGTAAAGGCGTGAATAAGAAACTTAAAATTTGGAAGTCTGTTGGAATCCCTCCAAAAGC
CCACCAAGAAGACAACTCAAATGTAGCATTTATTCAGCCAGGCCTTATTCTCTCTCCAAACCACAAATTAAAAGCCCTCCCTGCATTGGAACCAGTATCTTCTCTGTCCT
CTTCAAATCAGTCATTAAGTATGGCTATTTCTGACTCTATATCTTCTAAAGACAGTCTGAATAATGTTATTAAGCAAGCTGCACGAGAAGCAAACAAACTTGAGCCATCT
CAAAAGTTACAGATTGGTGCATCATTGAGTCATGGCTTGAAAAAGGATAAGAAGCTCAAGAGTTCGAAAGCCCCAAAAAGAATTTATCCTTTGTTCAAACCATTACACAA
GCAATTTTCCAGAAAAAAGACATCTTTCAATAATTCTTGGACAAAGATCACAAATCCAGACTTGTTAGAGGAGGGTTGTGTAAAGTTTCAAATCCCTGGAATTGTCCAAA
ACAGGTTAGTCTTATTGTCCTTTTCTTTAAATCACATCAATCATTCAAGTGGAAGTTCTCAAGCACATTGTGTTTCTCTTGTGCGAGGTACAAGTATTCCACAAGACTTG
GAAGAAGATTCAGTGATTAGTGTAAGCAGTGAAGAGCTTGAAAGGGATGAGGATGATGAATTTAAAAATTCTGAGTTCCTGGAAGATATGAACAAGGCTTTAGGCCTCTT
ATTATGA
Protein sequenceShow/hide protein sequence
MENWKNLLNYLENGKHLEFFNPIDLIRVLQVMKNEEGEAPEIDLEWGFIKEAGESLNFMRNPFVFIRRKSLGKFSALCSPRKPPVLPHTVASSSEVNPQAIVNIDTTLKW
KEKAEVIPVQCNLSSSKSKGVNKKLKIWKSVGIPPKAHQEDNSNVAFIQPGLILSPNHKLKALPALEPVSSLSSSNQSLSMAISDSISSKDSLNNVIKQAAREANKLEPS
QKLQIGASLSHGLKKDKKLKSSKAPKRIYPLFKPLHKQFSRKKTSFNNSWTKITNPDLLEEGCVKFQIPGIVQNRLVLLSFSLNHINHSSGSSQAHCVSLVRGTSIPQDL
EEDSVISVSSEELERDEDDEFKNSEFLEDMNKALGLLL