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PI0019426 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019426
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr04:18572235..18574395
RNA-Seq ExpressionPI0019426
SyntenyPI0019426
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]1.2e-1865.33Show/hide
Query:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPRK
        NN+N P  Q   E N AY+AHDLD+PI+SYA+PNLY+F+ GIAY  FGEN  FEIK +ML M QNAGQFGGHP +
Subjt:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPRK

KAA0060833.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]9.6e-1652.48Show/hide
Query:  MSDSEQP-FELDPEIERTFRGNRRRARQRK---IRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQM
        MS+ EQP F +D EIER F+ NRR+ ++R+       +NN+ AP  QA    N  Y+AH+ DRPIRS  +PNLY F+ GI YP FGEN RF+IKPVML +
Subjt:  MSDSEQP-FELDPEIERTFRGNRRRARQRK---IRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQM

Query:  I
        +
Subjt:  I

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]4.6e-1865.79Show/hide
Query:  ENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPRK
        +NN+  P  QA    N  Y+A D DRPIRSYA+PNLY+F+ GIAYP F EN RFEIK VMLQ+IQNAGQF  HPRK
Subjt:  ENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPRK

TYK08803.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]9.6e-1652.48Show/hide
Query:  MSDSEQP-FELDPEIERTFRGNRRRARQRK---IRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQM
        MS+ EQP F +D EIER F+ NRR+ ++R+       +NN+ AP  QA    N  Y+AH+ DRPIRS  +PNLY F+ GI YP FGEN RF+IKPVML +
Subjt:  MSDSEQP-FELDPEIERTFRGNRRRARQRK---IRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQM

Query:  I
        +
Subjt:  I

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]5.1e-1748Show/hide
Query:  FMSDSEQP-FELDPEIERTFRGNRRRARQRKIRR-MENNRNA-----PPPQADPEPNA------------AYIAHDLDRPIRSYAAPNLYNFSLGIAYPV
        +MS+ + P F++DPEIERTFR   R+ +QR+  + +E N +A       PQA    NA              +AHD +RP+R YA+PNLYNF+ GI  P 
Subjt:  FMSDSEQP-FELDPEIERTFRGNRRRARQRKIRR-MENNRNA-----PPPQADPEPNA------------AYIAHDLDRPIRSYAAPNLYNFSLGIAYPV

Query:  FGENARFEIKPVMLQMIQNAGQFGG
        F  N RFE+KPVMLQM+Q AGQFGG
Subjt:  FGENARFEIKPVMLQMIQNAGQFGG

TrEMBL top hitse value%identityAlignment
A0A5A7UDN8 Uncharacterized protein5.9e-1965.33Show/hide
Query:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPRK
        NN+N P  Q   E N AY+AHDLD+PI+SYA+PNLY+F+ GIAY  FGEN  FEIK +ML M QNAGQFGGHP +
Subjt:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPRK

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.64.6e-1652.48Show/hide
Query:  MSDSEQP-FELDPEIERTFRGNRRRARQRK---IRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQM
        MS+ EQP F +D EIER F+ NRR+ ++R+       +NN+ AP  QA    N  Y+AH+ DRPIRS  +PNLY F+ GI YP FGEN RF+IKPVML +
Subjt:  MSDSEQP-FELDPEIERTFRGNRRRARQRK---IRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQM

Query:  I
        +
Subjt:  I

A0A5A7V2U7 Putative disease resistance RPP13-like protein 12.2e-1865.79Show/hide
Query:  ENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPRK
        +NN+  P  QA    N  Y+A D DRPIRSYA+PNLY+F+ GIAYP F EN RFEIK VMLQ+IQNAGQF  HPRK
Subjt:  ENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPRK

A0A5D3BVN1 Putative disease resistance RPP13-like protein 17.4e-1458.44Show/hide
Query:  MENNRNAPPP---QADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQMIQNAGQFGGH
        M +N+N   P       + N   IAH+LD PIR+Y + NLY+F+LGIAY VFGENA FE+KPVMLQMIQ AGQF G+
Subjt:  MENNRNAPPP---QADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQMIQNAGQFGGH

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.64.6e-1652.48Show/hide
Query:  MSDSEQP-FELDPEIERTFRGNRRRARQRK---IRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQM
        MS+ EQP F +D EIER F+ NRR+ ++R+       +NN+ AP  QA    N  Y+AH+ DRPIRS  +PNLY F+ GI YP FGEN RF+IKPVML +
Subjt:  MSDSEQP-FELDPEIERTFRGNRRRARQRK---IRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQM

Query:  I
        +
Subjt:  I

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTACTAGGCGTTCTAGATCTTGTGCGGATTTTAAGCGAACAAAGGATGTCAGGCGAGGAACCCTACGCGAAGAAGCCACAGGCGAGGAATCCTGCTGGGCAGGC
GGCGAAAGAGATAGAGATATTTTCTTTGCCGAACTTATCCTTAGCATATTACTCAGAAATGACAAAATATGTGGCGGAAGCACCGAGAGGTGCTAATCTTTTTGCAGAAA
CTCAGTTTCAGTTGAATCACGTGTTCAAACCCGAAGAACGTGAGAACAAGTTTATGAGTGACAGCGAACAGCCATTCGAACTTGACCCTGAGATTGAGCGAACATTTCGG
GGTAATCGGCGAAGAGCAAGGCAAAGAAAAATTCGTAGAATGGAAAACAACAGAAACGCTCCTCCGCCGCAAGCTGACCCAGAACCCAATGCCGCCTATATCGCACATGA
TTTGGACAGGCCAATTAGATCCTATGCAGCACCCAATCTTTATAACTTCAGTCTAGGAATCGCCTACCCTGTATTTGGCGAGAACGCCAGGTTTGAAATCAAACCTGTTA
TGCTTCAGATGATTCAGAACGCCGGACAATTTGGCGGGCATCCTAGGAAGACCCACATGAGCATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTACTAGGCGTTCTAGATCTTGTGCGGATTTTAAGCGAACAAAGGATGTCAGGCGAGGAACCCTACGCGAAGAAGCCACAGGCGAGGAATCCTGCTGGGCAGGC
GGCGAAAGAGATAGAGATATTTTCTTTGCCGAACTTATCCTTAGCATATTACTCAGAAATGACAAAATATGTGGCGGAAGCACCGAGAGGTGCTAATCTTTTTGCAGAAA
CTCAGTTTCAGTTGAATCACGTGTTCAAACCCGAAGAACGTGAGAACAAGTTTATGAGTGACAGCGAACAGCCATTCGAACTTGACCCTGAGATTGAGCGAACATTTCGG
GGTAATCGGCGAAGAGCAAGGCAAAGAAAAATTCGTAGAATGGAAAACAACAGAAACGCTCCTCCGCCGCAAGCTGACCCAGAACCCAATGCCGCCTATATCGCACATGA
TTTGGACAGGCCAATTAGATCCTATGCAGCACCCAATCTTTATAACTTCAGTCTAGGAATCGCCTACCCTGTATTTGGCGAGAACGCCAGGTTTGAAATCAAACCTGTTA
TGCTTCAGATGATTCAGAACGCCGGACAATTTGGCGGGCATCCTAGGAAGACCCACATGAGCATATAA
Protein sequenceShow/hide protein sequence
MNLLGVLDLVRILSEQRMSGEEPYAKKPQARNPAGQAAKEIEIFSLPNLSLAYYSEMTKYVAEAPRGANLFAETQFQLNHVFKPEERENKFMSDSEQPFELDPEIERTFR
GNRRRARQRKIRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFSLGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPRKTHMSI