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PI0019434 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019434
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr09:9574724..9575972
RNA-Seq ExpressionPI0019434
SyntenyPI0019434
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]5.3e-2842.46Show/hide
Query:  IAEELKDELEAMSPLDDGPPPRKPREVAEPSRGKKKVGRSGPEERPSGGDTISKTPSI----NSLIKAFEWKQFFKGHTKLRFRVVEKFYAAKVNAEEFS
        +AEELK E+EAMS           +E+       ++ GR  P       +  S  P +     ++ +AF W++FFKG +K+R  VV KFYA+  N  E+ 
Subjt:  IAEELKDELEAMSPLDDGPPPRKPREVAEPSRGKKKVGRSGPEERPSGGDTISKTPSI----NSLIKAFEWKQFFKGHTKLRFRVVEKFYAAKVNAEEFS

Query:  VEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLF
          +  K+  FN EAIN LY+ P D E P  + + + ++R A EALE IAW GA +++TPTGKY LYPHQLT EAS+WLF
Subjt:  VEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLF

KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]4.8e-2149.59Show/hide
Query:  LRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLFF
        +R  VV  FY A +N EE   E+  K V F  +AINALY L N+    G +  ++P  R  ++ALE I WPG  W+  PT KY L+P+ L TE S+WL F
Subjt:  LRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLFF

Query:  IKK-ILLTRHDSTINLESAMLLY
        IKK I+ TRHDSTI++E  MLLY
Subjt:  IKK-ILLTRHDSTINLESAMLLY

KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]5.0e-2634.47Show/hide
Query:  EVVKTALKRKEEKKKMLAYLSEQVAELPMK---VKAL------EPERNLEVIAEELKDELEAMSPLDDGPPPRKPR-------EVAEPSRGKKKVGRSGP
        E  K A K +E+ +K    L +++ ++ +K   VKAL        E+  +  ++E + ELE +SPL+D    ++P+       + A     K K  +   
Subjt:  EVVKTALKRKEEKKKMLAYLSEQVAELPMK---VKAL------EPERNLEVIAEELKDELEAMSPLDDGPPPRKPR-------EVAEPSRGKKKVGRSGP

Query:  EERPSGGDTI--------------------SKTP-SINSLIKAFEWKQFFKGHTKLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDL-PND
        E + S  + +                     + P  + S IKA +WKQFF+G T +R  V+  FY   +N E     + GK V+F  + +N LY L    
Subjt:  EERPSGGDTI--------------------SKTP-SINSLIKAFEWKQFFKGHTKLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDL-PND

Query:  VEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLFFIKKILL-TRHDSTINLESAMLLYCIMAKTRVNLGELI
        VE P       P     + ALE +AWPG  W++TP  KY L+PH L T AS+WL FIKK L+ TRHD+TI+LE  MLLYCIM +  +N+ E+I
Subjt:  VEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLFFIKKILL-TRHDSTINLESAMLLYCIMAKTRVNLGELI

KAA0050753.1 hypothetical protein E6C27_scaffold46449G00020 [Cucumis melo var. makuwa]1.5e-2242.21Show/hide
Query:  LSEQVAELPMKVKALEPERNLEVIAEELKDELEAMS-PLDDGPPPRKPREVAEPSRGKKK---VGRSGPEERPSGGDTISKTPSINSLIKAFEWKQFFKG
        +SEQV  L  K   +  E ++E +AEELK E+EAMS   D    P+K R+ A     K+K   V  S PE    GG+   K P + S+ K        KG
Subjt:  LSEQVAELPMKVKALEPERNLEVIAEELKDELEAMS-PLDDGPPPRKPREVAEPSRGKKK---VGRSGPEERPSGGDTISKTPSINSLIKAFEWKQFFKG

Query:  HTKLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASM
         +K+R +V+ KFY + +N  E+ V + GK++ FN EAIN LYDLP D + P Q  + + ++R AREAL+ I W G   ++T T  Y LYPH+LTT+ASM
Subjt:  HTKLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASM

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]9.4e-2546.9Show/hide
Query:  KLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTG-KYHLYPHQLTTEASMWL
        K+R  VV KFY  K N  +  + I  +   FN E IN LY+ PND E  GQ  V    + +A+EAL+V+AWPG   EV P   +Y LYPH LTT+A++W+
Subjt:  KLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTG-KYHLYPHQLTTEASMWL

Query:  FFIK-KILLTRHDSTINLESAMLLYCIMAKTRVNLGELIATSILS
        FF K KI  T +DSTI+++  ++LYCIM K  +NL E+I  +IL+
Subjt:  FFIK-KILLTRHDSTINLESAMLLYCIMAKTRVNLGELIATSILS

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein2.6e-2842.46Show/hide
Query:  IAEELKDELEAMSPLDDGPPPRKPREVAEPSRGKKKVGRSGPEERPSGGDTISKTPSI----NSLIKAFEWKQFFKGHTKLRFRVVEKFYAAKVNAEEFS
        +AEELK E+EAMS           +E+       ++ GR  P       +  S  P +     ++ +AF W++FFKG +K+R  VV KFYA+  N  E+ 
Subjt:  IAEELKDELEAMSPLDDGPPPRKPREVAEPSRGKKKVGRSGPEERPSGGDTISKTPSI----NSLIKAFEWKQFFKGHTKLRFRVVEKFYAAKVNAEEFS

Query:  VEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLF
          +  K+  FN EAIN LY+ P D E P  + + + ++R A EALE IAW GA +++TPTGKY LYPHQLT EAS+WLF
Subjt:  VEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLF

A0A5A7TZE0 Protein MNN4-like2.4e-2634.47Show/hide
Query:  EVVKTALKRKEEKKKMLAYLSEQVAELPMK---VKAL------EPERNLEVIAEELKDELEAMSPLDDGPPPRKPR-------EVAEPSRGKKKVGRSGP
        E  K A K +E+ +K    L +++ ++ +K   VKAL        E+  +  ++E + ELE +SPL+D    ++P+       + A     K K  +   
Subjt:  EVVKTALKRKEEKKKMLAYLSEQVAELPMK---VKAL------EPERNLEVIAEELKDELEAMSPLDDGPPPRKPR-------EVAEPSRGKKKVGRSGP

Query:  EERPSGGDTI--------------------SKTP-SINSLIKAFEWKQFFKGHTKLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDL-PND
        E + S  + +                     + P  + S IKA +WKQFF+G T +R  V+  FY   +N E     + GK V+F  + +N LY L    
Subjt:  EERPSGGDTI--------------------SKTP-SINSLIKAFEWKQFFKGHTKLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDL-PND

Query:  VEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLFFIKKILL-TRHDSTINLESAMLLYCIMAKTRVNLGELI
        VE P       P     + ALE +AWPG  W++TP  KY L+PH L T AS+WL FIKK L+ TRHD+TI+LE  MLLYCIM +  +N+ E+I
Subjt:  VEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLFFIKKILL-TRHDSTINLESAMLLYCIMAKTRVNLGELI

A0A5A7U4E3 Uncharacterized protein7.3e-2342.21Show/hide
Query:  LSEQVAELPMKVKALEPERNLEVIAEELKDELEAMS-PLDDGPPPRKPREVAEPSRGKKK---VGRSGPEERPSGGDTISKTPSINSLIKAFEWKQFFKG
        +SEQV  L  K   +  E ++E +AEELK E+EAMS   D    P+K R+ A     K+K   V  S PE    GG+   K P + S+ K        KG
Subjt:  LSEQVAELPMKVKALEPERNLEVIAEELKDELEAMS-PLDDGPPPRKPREVAEPSRGKKK---VGRSGPEERPSGGDTISKTPSINSLIKAFEWKQFFKG

Query:  HTKLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASM
         +K+R +V+ KFY + +N  E+ V + GK++ FN EAIN LYDLP D + P Q  + + ++R AREAL+ I W G   ++T T  Y LYPH+LTT+ASM
Subjt:  HTKLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASM

A0A5A7V6M5 Gag/pol protein4.6e-2546.9Show/hide
Query:  KLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTG-KYHLYPHQLTTEASMWL
        K+R  VV KFY  K N  +  + I  +   FN E IN LY+ PND E  GQ  V    + +A+EAL+V+AWPG   EV P   +Y LYPH LTT+A++W+
Subjt:  KLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTG-KYHLYPHQLTTEASMWL

Query:  FFIK-KILLTRHDSTINLESAMLLYCIMAKTRVNLGELIATSILS
        FF K KI  T +DSTI+++  ++LYCIM K  +NL E+I  +IL+
Subjt:  FFIK-KILLTRHDSTINLESAMLLYCIMAKTRVNLGELIATSILS

A0A5D3CW17 Uncharacterized protein2.3e-2149.59Show/hide
Query:  LRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLFF
        +R  VV  FY A +N EE   E+  K V F  +AINALY L N+    G +  ++P  R  ++ALE I WPG  W+  PT KY L+P+ L TE S+WL F
Subjt:  LRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLTTEASMWLFF

Query:  IKK-ILLTRHDSTINLESAMLLY
        IKK I+ TRHDSTI++E  MLLY
Subjt:  IKK-ILLTRHDSTINLESAMLLY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGATCTTTAAGCCAACAAGACCAGATCAGAGTGCGTTCTGATGGCCCTGAATCAGAACGCCCTACATCACGAGGAAGTGGCGAGCAAAGGACGCCACAGTACAC
CCACCTGAAGTATGGGAAAGGCGGTGCTCGATTTTCTCAACGAGCGGATGAAGAAGAGGAAAGATGCTCACATCAAGAGGACAAAGGAAGCTCGCGCAGGAAGGATGAGC
GTGAGCGAATGAGATTTGAGGAAACTCGAAAGGCGAAGAGCACATTAGAAATACGCTCACCGCCTAACGAGGTTGTAAAGCTACACAAGAAGATATCCGATAAGCTTGCA
CAAGTCTCGTTCACCAAAACGAGGAAAACCATTGAGGTAGTTAAAACTGCCTTAAAAAGGAAGGAAGAAAAGAAAAAGATGCTCGCATACCTGAGCGAGCAAGTAGCGGA
GCTCCCTATGAAGGTAAAAGCACTGGAGCCTGAGAGAAACCTCGAGGTGATCGCAGAAGAACTCAAGGATGAGCTGGAGGCGATGAGCCCACTTGATGACGGGCCACCGC
CAAGAAAACCAAGGGAGGTCGCAGAACCATCTAGAGGCAAGAAGAAAGTTGGGCGTTCTGGACCTGAAGAGCGTCCATCAGGCGGCGACACCATTAGCAAAACACCCTCA
ATCAACTCCCTCATTAAGGCGTTCGAGTGGAAGCAGTTCTTCAAGGGGCACACTAAGTTGAGATTTAGGGTAGTGGAGAAATTTTATGCGGCTAAAGTCAACGCTGAAGA
GTTTAGCGTGGAAATCAGTGGTAAAACAGTGAGTTTCAACGCGGAGGCCATCAACGCGTTATATGATTTGCCCAATGATGTTGAAATGCCGGGGCAAATATACGTAGATA
GCCCTATGAGGAGGGTGGCCCGTGAAGCGTTGGAGGTCATCGCATGGCCTGGGGCCGCATGGGAAGTGACACCAACGGGGAAGTATCACCTTTATCCGCATCAGCTAACC
ACAGAGGCGAGCATGTGGCTGTTTTTCATCAAGAAGATCTTGCTAACGCGCCATGATAGCACCATTAACTTAGAGTCAGCGATGCTACTCTATTGTATAATGGCGAAGAC
GCGCGTCAACCTTGGCGAACTTATAGCCACATCCATTCTGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGATCTTTAAGCCAACAAGACCAGATCAGAGTGCGTTCTGATGGCCCTGAATCAGAACGCCCTACATCACGAGGAAGTGGCGAGCAAAGGACGCCACAGTACAC
CCACCTGAAGTATGGGAAAGGCGGTGCTCGATTTTCTCAACGAGCGGATGAAGAAGAGGAAAGATGCTCACATCAAGAGGACAAAGGAAGCTCGCGCAGGAAGGATGAGC
GTGAGCGAATGAGATTTGAGGAAACTCGAAAGGCGAAGAGCACATTAGAAATACGCTCACCGCCTAACGAGGTTGTAAAGCTACACAAGAAGATATCCGATAAGCTTGCA
CAAGTCTCGTTCACCAAAACGAGGAAAACCATTGAGGTAGTTAAAACTGCCTTAAAAAGGAAGGAAGAAAAGAAAAAGATGCTCGCATACCTGAGCGAGCAAGTAGCGGA
GCTCCCTATGAAGGTAAAAGCACTGGAGCCTGAGAGAAACCTCGAGGTGATCGCAGAAGAACTCAAGGATGAGCTGGAGGCGATGAGCCCACTTGATGACGGGCCACCGC
CAAGAAAACCAAGGGAGGTCGCAGAACCATCTAGAGGCAAGAAGAAAGTTGGGCGTTCTGGACCTGAAGAGCGTCCATCAGGCGGCGACACCATTAGCAAAACACCCTCA
ATCAACTCCCTCATTAAGGCGTTCGAGTGGAAGCAGTTCTTCAAGGGGCACACTAAGTTGAGATTTAGGGTAGTGGAGAAATTTTATGCGGCTAAAGTCAACGCTGAAGA
GTTTAGCGTGGAAATCAGTGGTAAAACAGTGAGTTTCAACGCGGAGGCCATCAACGCGTTATATGATTTGCCCAATGATGTTGAAATGCCGGGGCAAATATACGTAGATA
GCCCTATGAGGAGGGTGGCCCGTGAAGCGTTGGAGGTCATCGCATGGCCTGGGGCCGCATGGGAAGTGACACCAACGGGGAAGTATCACCTTTATCCGCATCAGCTAACC
ACAGAGGCGAGCATGTGGCTGTTTTTCATCAAGAAGATCTTGCTAACGCGCCATGATAGCACCATTAACTTAGAGTCAGCGATGCTACTCTATTGTATAATGGCGAAGAC
GCGCGTCAACCTTGGCGAACTTATAGCCACATCCATTCTGTCTTAG
Protein sequenceShow/hide protein sequence
MAGSLSQQDQIRVRSDGPESERPTSRGSGEQRTPQYTHLKYGKGGARFSQRADEEEERCSHQEDKGSSRRKDERERMRFEETRKAKSTLEIRSPPNEVVKLHKKISDKLA
QVSFTKTRKTIEVVKTALKRKEEKKKMLAYLSEQVAELPMKVKALEPERNLEVIAEELKDELEAMSPLDDGPPPRKPREVAEPSRGKKKVGRSGPEERPSGGDTISKTPS
INSLIKAFEWKQFFKGHTKLRFRVVEKFYAAKVNAEEFSVEISGKTVSFNAEAINALYDLPNDVEMPGQIYVDSPMRRVAREALEVIAWPGAAWEVTPTGKYHLYPHQLT
TEASMWLFFIKKILLTRHDSTINLESAMLLYCIMAKTRVNLGELIATSILS