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PI0019439 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019439
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr09:15336416..15338076
RNA-Seq ExpressionPI0019439
SyntenyPI0019439
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]4.8e-1940.56Show/hide
Query:  REALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGAL
        ++ALE I WPG  W+  PT K+QL P+ L TE SVWL FIK  I   RHDS I++E  MLLY        N  ++    ++AW++ P GA PF      L
Subjt:  REALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGAL

Query:  CLKTHPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLK
         +K +P      Q+ +S G+C    L+R IT+H +K   R L+
Subjt:  CLKTHPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLK

KAA0049609.1 transposase [Cucumis melo var. makuwa]1.8e-1838.69Show/hide
Query:  AREALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGA
        A++ +++I WP A    TPT + QL PH+LT EA+VWLFFIK KIF   HDS I  E  ++LYCI  +   NLG ++    L+WM+ PK A PFP+T+  
Subjt:  AREALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGA

Query:  LCLK-THPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLKTLGQKV---EDENETQVEPRKRK
        LCLK        + Q+ + GG C+      + T      ++R+  T G +V   +D    +  PRK++
Subjt:  LCLK-THPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLKTLGQKV---EDENETQVEPRKRK

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]1.3e-1943.09Show/hide
Query:  REALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGAL
        +EALE +AW    W++T   K++L  H LTTEASVWL FIK K+   RHD+ I+ E  MLLYCI++   V++ ++I   I AW+Q P+GA PFP  +  L
Subjt:  REALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGAL

Query:  CLKTHPSFFAVNQMP-ISGGLCS
        CL++        Q+  +  G+C+
Subjt:  CLKTHPSFFAVNQMP-ISGGLCS

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-2251.82Show/hide
Query:  MAREALEVIAWPGATWEITPTG-KHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTM
        +A+EAL+V+AWPG   E+ P   ++QL+PH LTT+A+VW+FF KNKIF   +DS I+++ T++LYCI+ +  +NL ++I   IL WM+ PK A+PFPS M
Subjt:  MAREALEVIAWPGATWEITPTG-KHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTM

Query:  GALCLKTHPS
          LCLK  PS
Subjt:  GALCLKTHPS

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]1.8e-1838.69Show/hide
Query:  AREALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGA
        A++ +++I WP A    TPT + QL PH+LT EA+VWLFFIK KIF   HDS I  E  ++LYCI  +   NLG ++    L+WM+ PK A PFP+T+  
Subjt:  AREALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGA

Query:  LCLK-THPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLKTLGQKV---EDENETQVEPRKRK
        LCLK        + Q+ + GG C+      + T      ++R+  T G +V   +D    +  PRK++
Subjt:  LCLK-THPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLKTLGQKV---EDENETQVEPRKRK

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase8.9e-1938.69Show/hide
Query:  AREALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGA
        A++ +++I WP A    TPT + QL PH+LT EA+VWLFFIK KIF   HDS I  E  ++LYCI  +   NLG ++    L+WM+ PK A PFP+T+  
Subjt:  AREALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGA

Query:  LCLK-THPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLKTLGQKV---EDENETQVEPRKRK
        LCLK        + Q+ + GG C+      + T      ++R+  T G +V   +D    +  PRK++
Subjt:  LCLK-THPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLKTLGQKV---EDENETQVEPRKRK

A0A5A7V6M5 Gag/pol protein7.8e-2351.82Show/hide
Query:  MAREALEVIAWPGATWEITPTG-KHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTM
        +A+EAL+V+AWPG   E+ P   ++QL+PH LTT+A+VW+FF KNKIF   +DS I+++ T++LYCI+ +  +NL ++I   IL WM+ PK A+PFPS M
Subjt:  MAREALEVIAWPGATWEITPTG-KHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTM

Query:  GALCLKTHPS
          LCLK  PS
Subjt:  GALCLKTHPS

A0A5D3CVL7 Uncharacterized protein8.9e-1938.69Show/hide
Query:  AREALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGA
        A++ +++I WP A    TPT + QL PH+LT EA+VWLFFIK KIF   HDS I  E  ++LYCI  +   NLG ++    L+WM+ PK A PFP+T+  
Subjt:  AREALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGA

Query:  LCLK-THPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLKTLGQKV---EDENETQVEPRKRK
        LCLK        + Q+ + GG C+      + T      ++R+  T G +V   +D    +  PRK++
Subjt:  LCLK-THPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLKTLGQKV---EDENETQVEPRKRK

A0A5D3CW17 Uncharacterized protein2.3e-1940.56Show/hide
Query:  REALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGAL
        ++ALE I WPG  W+  PT K+QL P+ L TE SVWL FIK  I   RHDS I++E  MLLY        N  ++    ++AW++ P GA PF      L
Subjt:  REALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGAL

Query:  CLKTHPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLK
         +K +P      Q+ +S G+C    L+R IT+H +K   R L+
Subjt:  CLKTHPSFFAVNQMPISGGLCSPVALNRMITLHAHKEMERQLK

A0A5D3DVQ6 Uncharacterized protein6.1e-2043.09Show/hide
Query:  REALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGAL
        +EALE +AW    W++T   K++L  H LTTEASVWL FIK K+   RHD+ I+ E  MLLYCI++   V++ ++I   I AW+Q P+GA PFP  +  L
Subjt:  REALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGAL

Query:  CLKTHPSFFAVNQMP-ISGGLCS
        CL++        Q+  +  G+C+
Subjt:  CLKTHPSFFAVNQMP-ISGGLCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGTGAAGCGTTGGAGGTCATCGCCTGGCCTGGGGCGACATGGGAGATTACGCCTACTGGAAAACATCAACTTCATCCACACAAGCTGACCACTGAAGCAAGTGT
ATGGCTATTCTTCATAAAAAATAAGATATTTTCCATGCGCCATGATAGCATCATCAACTTAGAATCCACGATGCTACTGTATTGCATTTTGAAAAGATGGCATGTGAACT
TAGGCGATTTGATAGTTACCACCATCCTTGCCTGGATGCAAGCTCCCAAGGGCGCCATACCCTTTCCGTCCACTATGGGGGCACTCTGCCTGAAGACCCACCCTTCTTTT
TTCGCCGTCAATCAAATGCCCATTTCAGGCGGCCTATGCAGTCCAGTGGCTTTGAATCGCATGATCACTCTCCATGCCCACAAGGAGATGGAGAGGCAGTTAAAGACCCT
GGGCCAAAAAGTAGAAGATGAGAACGAGACTCAAGTAGAGCCCCGTAAGAGAAAAGCCCCCAATACCGCATCAACCCCCAAACCAACCATAAAAAAACCAAAGGTTGATG
CGAAAGGCCAACCCCAGCCCTTAAAAATCATCCACCCATCCACACGCCATGCCAAGAGAACTCCCACAAAAATCCAAAAAGAACTCAACCTCTCTCTTCCCTCTAGCTTT
TCTTCGCCCATTCCATCCTCGCGTTTATCACCTTCCCGCCGCATTCCTTCGCCCATTCCATCACCACACCTATCTCCCCGCCTCCCTTCCCCCAAACCAACCAAAACCAC
ATCTCCCAACCTTCCCACCATTGTTCCTTCCCCAAGGCGAGCTAACATTTTATCGCCTTTTAACCTTTCGCCCATCCTAGATCTCTCCAACCAAAGCAATGACCCACCTA
CAGCCGCCACTGAGATCGTTGAGGACGTCAACACAAAAGATGGGGCCTCCAGCCACCCACCACTCATTTTGGATACAGGAAACCGCATTGATGACCCACTTTTCAAGGAA
AGAACACCTATCCTTGACAAAGCTGGCAAGATAGCCTCCTCGGCACATACTAACAATGCCCCACCAACCGCGTCGATTGAAGATGAAGATTTGGGCGATCTGCTGGACTT
AAATGTGTTCAAGCCAGTGTTTGATTATTTTGATCAAATACTAGCTCACCAAACAGATCAGGTGGAACAACTTCAAGAGTTGAAGACTTCAATTGACAAGTTGCAACACC
CTACGATTGAATCCCTAATGACGCACGCCTCTCAAGAAGATGTCAATAGTTTGAGGCGCAAGTTGAAGGATCTTTCAATGAGCCACACCCAACTCTCCACTGCAGTATCC
ACCTTCACCTCGCTGGTCATTGCCCAATCTGAGATGATGCGGCAAATAGCTGCGAGACATGATAAAAAATTTTACACTCAGATGGAGTATACCCACGCGACCCTTAATCA
ACGCGTGCCAGCACCGATCATTCTGCAAGAACTTGAGACACCCTTCCCACCACTCGCGCGCTTGGCGATCCTGAATCCCGCCAAGACAATTAAATTTAGGGGTGTTTTCA
AATTCTTATTGTATTTCGCTTTCTTTCATTTGCTCTTTTATTTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCGTGAAGCGTTGGAGGTCATCGCCTGGCCTGGGGCGACATGGGAGATTACGCCTACTGGAAAACATCAACTTCATCCACACAAGCTGACCACTGAAGCAAGTGT
ATGGCTATTCTTCATAAAAAATAAGATATTTTCCATGCGCCATGATAGCATCATCAACTTAGAATCCACGATGCTACTGTATTGCATTTTGAAAAGATGGCATGTGAACT
TAGGCGATTTGATAGTTACCACCATCCTTGCCTGGATGCAAGCTCCCAAGGGCGCCATACCCTTTCCGTCCACTATGGGGGCACTCTGCCTGAAGACCCACCCTTCTTTT
TTCGCCGTCAATCAAATGCCCATTTCAGGCGGCCTATGCAGTCCAGTGGCTTTGAATCGCATGATCACTCTCCATGCCCACAAGGAGATGGAGAGGCAGTTAAAGACCCT
GGGCCAAAAAGTAGAAGATGAGAACGAGACTCAAGTAGAGCCCCGTAAGAGAAAAGCCCCCAATACCGCATCAACCCCCAAACCAACCATAAAAAAACCAAAGGTTGATG
CGAAAGGCCAACCCCAGCCCTTAAAAATCATCCACCCATCCACACGCCATGCCAAGAGAACTCCCACAAAAATCCAAAAAGAACTCAACCTCTCTCTTCCCTCTAGCTTT
TCTTCGCCCATTCCATCCTCGCGTTTATCACCTTCCCGCCGCATTCCTTCGCCCATTCCATCACCACACCTATCTCCCCGCCTCCCTTCCCCCAAACCAACCAAAACCAC
ATCTCCCAACCTTCCCACCATTGTTCCTTCCCCAAGGCGAGCTAACATTTTATCGCCTTTTAACCTTTCGCCCATCCTAGATCTCTCCAACCAAAGCAATGACCCACCTA
CAGCCGCCACTGAGATCGTTGAGGACGTCAACACAAAAGATGGGGCCTCCAGCCACCCACCACTCATTTTGGATACAGGAAACCGCATTGATGACCCACTTTTCAAGGAA
AGAACACCTATCCTTGACAAAGCTGGCAAGATAGCCTCCTCGGCACATACTAACAATGCCCCACCAACCGCGTCGATTGAAGATGAAGATTTGGGCGATCTGCTGGACTT
AAATGTGTTCAAGCCAGTGTTTGATTATTTTGATCAAATACTAGCTCACCAAACAGATCAGGTGGAACAACTTCAAGAGTTGAAGACTTCAATTGACAAGTTGCAACACC
CTACGATTGAATCCCTAATGACGCACGCCTCTCAAGAAGATGTCAATAGTTTGAGGCGCAAGTTGAAGGATCTTTCAATGAGCCACACCCAACTCTCCACTGCAGTATCC
ACCTTCACCTCGCTGGTCATTGCCCAATCTGAGATGATGCGGCAAATAGCTGCGAGACATGATAAAAAATTTTACACTCAGATGGAGTATACCCACGCGACCCTTAATCA
ACGCGTGCCAGCACCGATCATTCTGCAAGAACTTGAGACACCCTTCCCACCACTCGCGCGCTTGGCGATCCTGAATCCCGCCAAGACAATTAAATTTAGGGGTGTTTTCA
AATTCTTATTGTATTTCGCTTTCTTTCATTTGCTCTTTTATTTTTTGTAA
Protein sequenceShow/hide protein sequence
MAREALEVIAWPGATWEITPTGKHQLHPHKLTTEASVWLFFIKNKIFSMRHDSIINLESTMLLYCILKRWHVNLGDLIVTTILAWMQAPKGAIPFPSTMGALCLKTHPSF
FAVNQMPISGGLCSPVALNRMITLHAHKEMERQLKTLGQKVEDENETQVEPRKRKAPNTASTPKPTIKKPKVDAKGQPQPLKIIHPSTRHAKRTPTKIQKELNLSLPSSF
SSPIPSSRLSPSRRIPSPIPSPHLSPRLPSPKPTKTTSPNLPTIVPSPRRANILSPFNLSPILDLSNQSNDPPTAATEIVEDVNTKDGASSHPPLILDTGNRIDDPLFKE
RTPILDKAGKIASSAHTNNAPPTASIEDEDLGDLLDLNVFKPVFDYFDQILAHQTDQVEQLQELKTSIDKLQHPTIESLMTHASQEDVNSLRRKLKDLSMSHTQLSTAVS
TFTSLVIAQSEMMRQIAARHDKKFYTQMEYTHATLNQRVPAPIILQELETPFPPLARLAILNPAKTIKFRGVFKFLLYFAFFHLLFYFL