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PI0019454 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019454
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr11:22741570..22741728
RNA-Seq ExpressionPI0019454
SyntenyPI0019454
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO73521.1 gag-pol polyprotein [Glycine max]9.6e-1376.92Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        MIG LLYLTASRPDI Y VGVCARYQ  PK SH+  VKRILKYV GTSDY +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
AAO73527.1 gag-pol polyprotein [Glycine max]9.6e-1376.92Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        MIG LLYLTASRPDI Y VGVCARYQ  PK SH+  VKRILKYV GTSDY +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
MCH90383.1 gag-pol polyprotein [Trifolium medium]7.3e-1376.92Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        MIG LLYLTASRPDIAY VGVCARYQ  PK+SH+  VKRILKYV GT DY +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
MCI29986.1 gag-pol polyprotein [Trifolium medium]7.3e-1375Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        MIG LLYLTASRPDIA+ VGVCARYQ APK SH+  VKRI+KYV GT DY +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
PNX90667.1 gag-pol polyprotein, partial [Trifolium pratense]1.6e-1275Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        MIG LLYLTASRPDI + VGVCARYQ  PK SH+  VKRILKYV GTSDY +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
TrEMBL top hitse value%identityAlignment
A0A2K3PGI6 Gag-pol polyprotein7.9e-1375Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        MIG LLYLTASRPDI + VGVCARYQ  PK SH+  VKRILKYV GTSDY +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
A0A392MST7 Gag-pol polyprotein (Fragment)3.6e-1376.92Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        MIG LLYLTASRPDIAY VGVCARYQ  PK+SH+  VKRILKYV GT DY +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
A0A392R2C1 Gag-pol polyprotein (Fragment)3.6e-1375Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        MIG LLYLTASRPDIA+ VGVCARYQ APK SH+  VKRI+KYV GT DY +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
Q84VH8 Gag-pol polyprotein4.6e-1376.92Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        MIG LLYLTASRPDI Y VGVCARYQ  PK SH+  VKRILKYV GTSDY +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
Q84VI4 Gag-pol polyprotein4.6e-1376.92Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        MIG LLYLTASRPDI Y VGVCARYQ  PK SH+  VKRILKYV GTSDY +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
SwissProt top hitse value%identityAlignment
P92519 Uncharacterized mitochondrial protein AtMg008106.5e-0440.43Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGT
        ++G L YLT +RPDI+Y V +  +  + P  +    +KR+L+YV GT
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGT
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.0e-0536.54Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        ++G L YL  +RPDI+Y V   +++ + P   H+ ++KRIL+Y+ GT ++ +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.0e-0536.54Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
        ++G L YL  +RPD++Y V   ++Y + P   H  ++KR+L+Y+ GT D+ +
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL
Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.8e-0540.43Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGT
        +IGRL+YL  +R DI++ V   +++  AP+ +H  +V +IL Y+ GT
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGT
ATMG00810.1 DNA/RNA polymerases superfamily protein4.6e-0540.43Show/hide
Query:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGT
        ++G L YLT +RPDI+Y V +  +  + P  +    +KR+L+YV GT
Subjt:  MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGAAGATTACTTTATCTCACAGCCAGTCGTCCTGATATTGCTTATGTTGTTGGTGTATGTGCTCGGTACCAATATGCTCCTAAATCATCTCATATTGCTTCTGT
CAAACGAATTCTTAAATATGTTCTTGGCACTTCTGATTATGACCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGAAGATTACTTTATCTCACAGCCAGTCGTCCTGATATTGCTTATGTTGTTGGTGTATGTGCTCGGTACCAATATGCTCCTAAATCATCTCATATTGCTTCTGT
CAAACGAATTCTTAAATATGTTCTTGGCACTTCTGATTATGACCTATGA
Protein sequenceShow/hide protein sequence
MIGRLLYLTASRPDIAYVVGVCARYQYAPKSSHIASVKRILKYVLGTSDYDL