; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019455 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019455
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTHO complex subunit 4A
Genome locationchr12:22993415..22996469
RNA-Seq ExpressionPI0019455
SyntenyPI0019455
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR025715 - Chromatin target of PRMT1 protein, C-terminal
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583468.1 THO complex subunit 4A, partial [Cucurbita argyrosperma subsp. sororia]9.7e-10586.42Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------
        MAEPLDMSLDDIIKNNKKSGSSNFR RGGASSGPGPSRRFRNRGLNRA PYST++APETAWSHDMFVDHGAAYPS P RASAIETGTKLYV         
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------

Query:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
          I ELFSEVGDLKR+SINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK MKLEIVGTNIVTPA+PA +N +FGNPNGF RGG  +GRNRGGGR
Subjt:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR

Query:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        GRGPGRG RGRGS S RGRGEKLSAEDLDADL+KYHEEAMQIN
Subjt:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

XP_004149042.2 THO complex subunit 4A isoform X1 [Cucumis sativus]7.4e-11390.8Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------
        MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYV         
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------

Query:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
          I ELFSEVGD+KR+SINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
Subjt:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR

Query:  GRGPGRG-ARGR------GSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        GRGPGRG  RGR      GSGSGRG GEKLSAEDLDADLDKYHEEAMQIN
Subjt:  GRGPGRG-ARGR------GSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

XP_008457549.1 PREDICTED: THO complex subunit 4A [Cucumis melo]1.5e-11392.24Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------
        MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYV         
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------

Query:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
          I ELFSEVGDLKR+SINYDKSGRSKGTAEI+FSR ADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGN NGFPRGGRAMGRNRGGGR
Subjt:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR

Query:  GRGPGRGARGR--GSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        GRGPGRG RGR  GSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
Subjt:  GRGPGRGARGR--GSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

XP_022964653.1 THO complex subunit 4B-like [Cucurbita moschata]1.7e-10486.42Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------
        MAEPLDMSLDDIIKNNKKSGSSNFR RGGASSGPGPSRRFRNRGLNRA PYST++APETAWSHDMFVDHG+AYPS P RASAIETGTKLYV         
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------

Query:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
          I ELFSEVGDLKR+SINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK MKLEIVGTNIVTPAVPA +N +FGNPNGF RGG  +GRNRGGGR
Subjt:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR

Query:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        GRGPGRG RGRGS S RGRGEKLSAEDLDADL+KYHEEAMQIN
Subjt:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

XP_038895300.1 THO complex subunit 4A-like [Benincasa hispida]1.1e-11190.12Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------
        MAEPLDMSLDDIIKNNKKSGSSNFR RGGASSGPGPSRRFRNRGLNRA PYS +KAPETAWSHDMFVDHGAAYPS PPRASAIETGTKLYV         
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------

Query:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
          I ELFSEVGDLKR+SINYDKSGRSKGTAEIVFSRQ+DALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPA SNA FGNPNGFPRGGRA+GRNRGGGR
Subjt:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR

Query:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        GRGPGRG RGRGSGSGRGRGEKLSAEDLDADL+KYHEEAMQIN
Subjt:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

TrEMBL top hitse value%identityAlignment
A0A0A0LUQ3 RRM domain-containing protein3.6e-11390.8Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------
        MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYV         
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------

Query:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
          I ELFSEVGD+KR+SINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
Subjt:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR

Query:  GRGPGRG-ARGR------GSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        GRGPGRG  RGR      GSGSGRG GEKLSAEDLDADLDKYHEEAMQIN
Subjt:  GRGPGRG-ARGR------GSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

A0A1S3C5R6 THO complex subunit 4A7.2e-11492.24Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------
        MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYV         
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------

Query:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
          I ELFSEVGDLKR+SINYDKSGRSKGTAEI+FSR ADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGN NGFPRGGRAMGRNRGGGR
Subjt:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR

Query:  GRGPGRGARGR--GSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        GRGPGRG RGR  GSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
Subjt:  GRGPGRGARGR--GSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

A0A6J1G9Y5 THO complex subunit 4A-like isoform X25.0e-9981.89Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------
        M +PLD SLDDIIKNNKKSGSSNFR RGGASSGP PSRRF NRGLNRA PYS +KAPET WSHD+FVDHG AYPSHP RAS IETGTKLYV         
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------

Query:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
          I ELFSEVGDLKR+SINYDKSGRSKGTAE+VFSRQADALAAIKRYNNVQLDGKPMKLEIVG NIVTP +PA SN +FGN +GF RGGRA+GRNRGGGR
Subjt:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR

Query:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        GRGPGRG  GRG G+GRG GEKLSAEDLDADL+KYHEEAMQIN
Subjt:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

A0A6J1HLI4 THO complex subunit 4B-like8.0e-10586.42Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------
        MAEPLDMSLDDIIKNNKKSGSSNFR RGGASSGPGPSRRFRNRGLNRA PYST++APETAWSHDMFVDHG+AYPS P RASAIETGTKLYV         
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------

Query:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
          I ELFSEVGDLKR+SINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK MKLEIVGTNIVTPAVPA +N +FGNPNGF RGG  +GRNRGGGR
Subjt:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR

Query:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        GRGPGRG RGRGS S RGRGEKLSAEDLDADL+KYHEEAMQIN
Subjt:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

A0A6J1I3N4 THO complex subunit 4A-like1.8e-10486.42Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------
        MAEPLDMSLDDIIKNNKKSGSSNFR RGGASSGPGPSRRFRNRGLNRA PYST++APETAWSHDMFVDHGAAYPS P RASAIETGTKLYV         
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIW------

Query:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR
          I ELFSEVGDLKR+SINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK MKLEIVGTNIVTPAVPA +N +FGNPNGF RGG  +GRNRGGGR
Subjt:  --IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGR

Query:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        GRGPGRG RG GS S RGRGEKLSAEDLDADL+KYHEEAMQIN
Subjt:  GRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

SwissProt top hitse value%identityAlignment
B5FXN8 THO complex subunit 41.8e-3242.08Show/hide
Query:  MAEPLDMSLDDIIKNNKKS-----GSSNFRARGGASSGPGPSR-----------RFRNR-------GLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHP
        MA+ +DMSLDDIIK N+       G    R RGG + G GP R             RNR       G NR  PYS  K     W HD+F D G       
Subjt:  MAEPLDMSLDDIIKNNKKS-----GSSNFRARGGASSGPGPSR-----------RFRNR-------GLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHP

Query:  PRASAIETGTKLYVL--------IWIMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNA
           + +ETG KL V           I ELF+E G LK+ +++YD+SGRS GTA++ F R+ADAL A+K+YN V LDG+PM +++V + I T   PA S  
Subjt:  PRASAIETGTKLYVL--------IWIMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNA

Query:  SFGNPNGFPRGGRAMGRNRGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYH
           N  G  R    +G   GGG  RG   G RGRG G+GR   ++LSAE+LDA LD Y+
Subjt:  SFGNPNGFPRGGRAMGRNRGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYH

Q3T0I4 THO complex subunit 41.6e-3040.46Show/hide
Query:  MAEPLDMSLDDIIKNNKKS----GSSNFRARGGASSGPGPSRR-----------FRNR-----------GLNRATPYSTSKAPETAWSHDMFVDHGAAYP
        MA+ +DMSLDDIIK N+      G    R R G+  G G   +            RNR           G NR  PYS  K     W HD+F D G    
Subjt:  MAEPLDMSLDDIIKNNKKS----GSSNFRARGGASSGPGPSRR-----------FRNR-----------GLNRATPYSTSKAPETAWSHDMFVDHGAAYP

Query:  SHPPRASAIETGTKLYVL--------IWIMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAP
              + +ETG KL V           I ELF+E G LK+ +++YD+SGRS GTA++ F R+ADAL A+K+YN V LDG+PM +++V + I T   PA 
Subjt:  SHPPRASAIETGTKLYVL--------IWIMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAP

Query:  SNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYH
        S     N  G  R   + G   GGG  RG   G+RGRG G+GR   ++LSAE+LDA LD Y+
Subjt:  SNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYH

Q86V81 THO complex subunit 41.3e-3040.84Show/hide
Query:  MAEPLDMSLDDIIKNNKKS----GSSNFRARGGASSGPGPSRR-----------FRNR-----------GLNRATPYSTSKAPETAWSHDMFVDHGAAYP
        MA+ +DMSLDDIIK N+      G    R R G+  G G   +            RNR           G NR  PYS  K     W HD+F D G    
Subjt:  MAEPLDMSLDDIIKNNKKS----GSSNFRARGGASSGPGPSRR-----------FRNR-----------GLNRATPYSTSKAPETAWSHDMFVDHGAAYP

Query:  SHPPRASAIETGTKLYVL--------IWIMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAP
              + +ETG KL V           I ELF+E G LK+ +++YD+SGRS GTA++ F R+ADAL A+K+YN V LDG+PM +++V + I     PA 
Subjt:  SHPPRASAIETGTKLYVL--------IWIMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAP

Query:  SNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYH
        S     N  G  R   A G   GGG  RG   GARGRG G+GR   ++LSAE+LDA LD Y+
Subjt:  SNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYH

Q8L719 THO complex subunit 4B2.6e-5250.86Show/hide
Query:  MAEPLDMSLDDIIKNNKK----------SGSSNFRARGGASSGPGPSRRFRNRGLNRATPYS----TSKAPETAWSHDMFVDH---GAAYPSHPPR----
        M+  LDMSLDDIIK+N+K           G +N   RGG+ S  GPSRRF NR   R  PYS      +A +  W +D+F       AA+  H       
Subjt:  MAEPLDMSLDDIIKNNKK----------SGSSNFRARGGASSGPGPSRRFRNRGLNRATPYS----TSKAPETAWSHDMFVDH---GAAYPSHPPR----

Query:  ASAIETGTKLYVLIW--------IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------V
         S+IETGTKLY+           I ELFSEVGDLKR+ I+YD+SGRSKGTAE+VFSR+ DALAA+KRYNNVQLDGK MK+EIVGTN+  PA        +
Subjt:  ASAIETGTKLYVLIW--------IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------V

Query:  PAPSNASFGNPN----------------GFPRGGRAMGRNRGGGRGRG---PGRGARGRG--SGSGRGRGEKLSAEDLDADLDKYHEEAMQ
        P P+N   GN N                G  RGG  MGR RGGG G G    GRGARGRG     GRGR E +SAEDLDA+LDKYH+EAM+
Subjt:  PAPSNASFGNPN----------------GFPRGGRAMGRNRGGGRGRG---PGRGARGRG--SGSGRGRGEKLSAEDLDADLDKYHEEAMQ

Q8L773 THO complex subunit 4A4.6e-5756.85Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARG-GASSGPGPSRRFR-NRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASA-IETGTKLYVLIW---
        M+  LDMSLDD+I  N+KS      ARG G+ SGPGP+RR   NR   R+ PY ++KAPE+ W HDMF D    + S   R+SA IETGTKLY+      
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARG-GASSGPGPSRRFR-NRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASA-IETGTKLYVLIW---

Query:  -----IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRN
             I ELF+EVG+LKR+++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGKPMK+EIVGTN+ T A P+   A+ GN NG P RGG+   G+ 
Subjt:  -----IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRN

Query:  RGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        RGGGRG G GRG  GRG   G+G  EK+SAEDLDADLDKYH   M+ N
Subjt:  RGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

Arabidopsis top hitse value%identityAlignment
AT5G02530.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.9e-5350.86Show/hide
Query:  MAEPLDMSLDDIIKNNKK----------SGSSNFRARGGASSGPGPSRRFRNRGLNRATPYS----TSKAPETAWSHDMFVDH---GAAYPSHPPR----
        M+  LDMSLDDIIK+N+K           G +N   RGG+ S  GPSRRF NR   R  PYS      +A +  W +D+F       AA+  H       
Subjt:  MAEPLDMSLDDIIKNNKK----------SGSSNFRARGGASSGPGPSRRFRNRGLNRATPYS----TSKAPETAWSHDMFVDH---GAAYPSHPPR----

Query:  ASAIETGTKLYVLIW--------IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------V
         S+IETGTKLY+           I ELFSEVGDLKR+ I+YD+SGRSKGTAE+VFSR+ DALAA+KRYNNVQLDGK MK+EIVGTN+  PA        +
Subjt:  ASAIETGTKLYVLIW--------IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------V

Query:  PAPSNASFGNPN----------------GFPRGGRAMGRNRGGGRGRG---PGRGARGRG--SGSGRGRGEKLSAEDLDADLDKYHEEAMQ
        P P+N   GN N                G  RGG  MGR RGGG G G    GRGARGRG     GRGR E +SAEDLDA+LDKYH+EAM+
Subjt:  PAPSNASFGNPN----------------GFPRGGRAMGRNRGGGRGRG---PGRGARGRG--SGSGRGRGEKLSAEDLDADLDKYHEEAMQ

AT5G02530.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-5350.69Show/hide
Query:  MAEPLDMSLDDIIKNNKK----------SGSSNFRARGGASSGPGPSRRFRNRGLNRATPYS----TSKAPETAWSHDMFVDH---GAAYPSHPPR----
        M+  LDMSLDDIIK+N+K           G +N   RGG+ S  GPSRRF NR   R  PYS      +A +  W +D+F       AA+  H       
Subjt:  MAEPLDMSLDDIIKNNKK----------SGSSNFRARGGASSGPGPSRRFRNRGLNRATPYS----TSKAPETAWSHDMFVDH---GAAYPSHPPR----

Query:  ASAIETGTKLYVLIW--------IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------V
         S+IETGTKLY+           I ELFSEVGDLKR+ I+YD+SGRSKGTAE+VFSR+ DALAA+KRYNNVQLDGK MK+EIVGTN+  PA        +
Subjt:  ASAIETGTKLYVLIW--------IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------V

Query:  PAPSNASFGNPN-------------GFPRGGRAMGRNRGGGRGRG---PGRGARGRG--SGSGRGRGEKLSAEDLDADLDKYHEEAMQ
        P P+N   GN N              F   G  MGR RGGG G G    GRGARGRG     GRGR E +SAEDLDA+LDKYH+EAM+
Subjt:  PAPSNASFGNPN-------------GFPRGGRAMGRNRGGGRGRG---PGRGARGRG--SGSGRGRGEKLSAEDLDADLDKYHEEAMQ

AT5G59950.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.3e-5856.85Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARG-GASSGPGPSRRFR-NRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASA-IETGTKLYVLIW---
        M+  LDMSLDD+I  N+KS      ARG G+ SGPGP+RR   NR   R+ PY ++KAPE+ W HDMF D    + S   R+SA IETGTKLY+      
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARG-GASSGPGPSRRFR-NRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASA-IETGTKLYVLIW---

Query:  -----IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRN
             I ELF+EVG+LKR+++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGKPMK+EIVGTN+ T A P+   A+ GN NG P RGG+   G+ 
Subjt:  -----IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRN

Query:  RGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        RGGGRG G GRG  GRG   G+G  EK+SAEDLDADLDKYH   M+ N
Subjt:  RGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

AT5G59950.3 RNA-binding (RRM/RBD/RNP motifs) family protein5.2e-5656.45Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARG-GASSGPGPSRRFR-NRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASA-IETGTKLYVLIW---
        M+  LDMSLDD+I  N+KS      ARG G+ SGPGP+RR   NR   R+ PY +  APE+ W HDMF D    + S   R+SA IETGTKLY+      
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARG-GASSGPGPSRRFR-NRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASA-IETGTKLYVLIW---

Query:  -----IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRN
             I ELF+EVG+LKR+++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGKPMK+EIVGTN+ T A P+   A+ GN NG P RGG+   G+ 
Subjt:  -----IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRN

Query:  RGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
        RGGGRG G GRG  GRG   G+G  EK+SAEDLDADLDKYH   M+ N
Subjt:  RGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN

AT5G59950.5 RNA-binding (RRM/RBD/RNP motifs) family protein4.3e-5856.63Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRARG-GASSGPGPSRRFR-NRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASA-IETGTKLYVLIW---
        M+  LDMSLDD+I  N+KS      ARG G+ SGPGP+RR   NR   R+ PY ++KAPE+ W HDMF D    + S   R+SA IETGTKLY+      
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRARG-GASSGPGPSRRFR-NRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASA-IETGTKLYVLIW---

Query:  -----IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFP--RGGRAM-GR
             I ELF+EVG+LKR+++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGKPMK+EIVGTN+ T A P+   A+ GN NG P  RGG+   G+
Subjt:  -----IMELFSEVGDLKRFSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFP--RGGRAM-GR

Query:  NRGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN
         RGGGRG G GRG  GRG   G+G  EK+SAEDLDADLDKYH   M+ N
Subjt:  NRGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDLDADLDKYHEEAMQIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCCTCTCGACATGAGCTTAGATGATATCATCAAGAACAACAAGAAATCCGGTTCCTCAAACTTCAGAGCTCGTGGCGGAGCTTCTTCTGGACCAGGTCCTTC
TCGCCGCTTTCGCAATCGTGGTCTTAATAGAGCAACGCCTTATTCTACTTCCAAGGCGCCCGAGACGGCTTGGTCACACGACATGTTTGTAGATCACGGTGCGGCTTATC
CTTCACACCCTCCACGGGCTTCTGCTATTGAAACTGGCACCAAGCTTTATGTTCTAATTTGGATTATGGAGCTGTTTTCTGAAGTTGGTGATCTCAAACGGTTTTCTATC
AATTATGATAAAAGTGGGAGATCGAAGGGAACGGCAGAAATTGTTTTTTCACGACAAGCAGATGCTCTTGCTGCTATAAAGAGATATAACAATGTTCAGCTAGATGGGAA
GCCCATGAAGTTGGAGATTGTTGGAACTAACATCGTTACACCTGCTGTGCCTGCTCCTTCAAATGCTAGTTTTGGGAATCCTAATGGATTTCCGAGAGGTGGACGTGCAA
TGGGTCGAAACCGAGGTGGTGGACGAGGACGTGGTCCTGGAAGAGGAGCGCGTGGACGTGGGAGTGGGAGTGGCAGAGGTCGTGGTGAGAAGTTATCAGCTGAAGATCTA
GATGCTGATTTGGACAAGTACCATGAAGAAGCGATGCAGATCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGCCTCTCGACATGAGCTTAGATGATATCATCAAGAACAACAAGAAATCCGGTTCCTCAAACTTCAGAGCTCGTGGCGGAGCTTCTTCTGGACCAGGTCCTTC
TCGCCGCTTTCGCAATCGTGGTCTTAATAGAGCAACGCCTTATTCTACTTCCAAGGCGCCCGAGACGGCTTGGTCACACGACATGTTTGTAGATCACGGTGCGGCTTATC
CTTCACACCCTCCACGGGCTTCTGCTATTGAAACTGGCACCAAGCTTTATGTTCTAATTTGGATTATGGAGCTGTTTTCTGAAGTTGGTGATCTCAAACGGTTTTCTATC
AATTATGATAAAAGTGGGAGATCGAAGGGAACGGCAGAAATTGTTTTTTCACGACAAGCAGATGCTCTTGCTGCTATAAAGAGATATAACAATGTTCAGCTAGATGGGAA
GCCCATGAAGTTGGAGATTGTTGGAACTAACATCGTTACACCTGCTGTGCCTGCTCCTTCAAATGCTAGTTTTGGGAATCCTAATGGATTTCCGAGAGGTGGACGTGCAA
TGGGTCGAAACCGAGGTGGTGGACGAGGACGTGGTCCTGGAAGAGGAGCGCGTGGACGTGGGAGTGGGAGTGGCAGAGGTCGTGGTGAGAAGTTATCAGCTGAAGATCTA
GATGCTGATTTGGACAAGTACCATGAAGAAGCGATGCAGATCAATTAA
Protein sequenceShow/hide protein sequence
MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVLIWIMELFSEVGDLKRFSI
NYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGARGRGSGSGRGRGEKLSAEDL
DADLDKYHEEAMQIN