; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019462 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019462
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionglycine-rich RNA-binding protein GRP1A-like
Genome locationchr10:21027075..21030523
RNA-Seq ExpressionPI0019462
SyntenyPI0019462
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446752.1 PREDICTED: uncharacterized protein LOC103489382 [Cucumis melo]2.9e-5989.04Show/hide
Query:  MRRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHTGGGTAVI
        M RRGIRLIFLLFCSTLAISSAALQQQIF TATESNYQQK YT+K GK GVTNQI+RRYSASAITVSNVIRR  G AAAAGGGENGGGSRPHTGGGTAVI
Subjt:  MRRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHTGGGTAVI

Query:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF
        PVYAAGSAQARHRQGRPHNAGN YENN  LLVA VLAAIAHL RV+
Subjt:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF

XP_011655831.2 glycine-rich protein DOT1 [Cucumis sativus]8.8e-5683.44Show/hide
Query:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRR------------GTGSAAAAGGGENGGGS
        RRRGIRLIFLLFCSTLAISSAALQQQIF TATESNYQQK YTKKHGK GVTNQINRRYS+SAITVSNVIRR            G+GSAAAAGGGEN GGS
Subjt:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRR------------GTGSAAAAGGGENGGGS

Query:  RPHTGGGTAVIPVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF
        RP TGGGTAVIPVYAAGSAQA HRQGR HNAGN YENN+ LLVA VLAAIAHL RVF
Subjt:  RPHTGGGTAVIPVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF

XP_022957462.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita moschata]2.4e-3767.81Show/hide
Query:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHT-GGGTAVI
        RRR + L+FLLFCST+   S+ALQQQI    TESNY QK   +KHGKDGVTN+I+  YSA AITVS    +G G  +AAGGGENGGG RP   GGG AVI
Subjt:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHT-GGGTAVI

Query:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF
        PVYAAGSAQA HRQGR  NAGN YENN+ LLVA+VLAAI HL+ VF
Subjt:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF

XP_023517064.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo]8.3e-3868.49Show/hide
Query:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHT-GGGTAVI
        RRR + L+FLLFCST+   S+ALQQQI    TESNY QK   +KHGKDGVTN+I+  YSA AITVS    +G G  +AAGGGENGGG RP   GGG AVI
Subjt:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHT-GGGTAVI

Query:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF
        PVYAAGSAQA HRQGR  NAGN YENN+ LLVA+VLAAIAHL+ VF
Subjt:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF

XP_038892711.1 uncharacterized protein LOC120081693 [Benincasa hispida]4.0e-4878.62Show/hide
Query:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHTGGGTAVIP
        RRR +RLI LL CST+AISSAALQQQIF   TESNYQQK YT+K  KDG+TNQI RRYSA+ ITVSN I +G   +A AGGGENGGGSRPH GGGTAVIP
Subjt:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHTGGGTAVIP

Query:  VYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF
        VYAAGSAQA HRQGRPHNAGNR+ENN  LLVA VLAAIAHLY VF
Subjt:  VYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF

TrEMBL top hitse value%identityAlignment
A0A0A0KUR6 Uncharacterized protein1.5e-5685.62Show/hide
Query:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRR--------GTGSAAAAGGGENGGGSRPHT
        RRRGIRLIFLLFCSTLAISSAALQQQIF TATESNYQQK YTKKHGK GVTNQINRRYS+SAITVSNVIRR        G+GSAAAAGGGEN GGSRP T
Subjt:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRR--------GTGSAAAAGGGENGGGSRPHT

Query:  GGGTAVIPVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF
        GGGTAVIPVYAAGSAQA HRQGR HNAGN YENN+ LLVA VLAAIAHL RVF
Subjt:  GGGTAVIPVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF

A0A1S3BFU8 uncharacterized protein LOC1034893821.4e-5989.04Show/hide
Query:  MRRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHTGGGTAVI
        M RRGIRLIFLLFCSTLAISSAALQQQIF TATESNYQQK YT+K GK GVTNQI+RRYSASAITVSNVIRR  G AAAAGGGENGGGSRPHTGGGTAVI
Subjt:  MRRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHTGGGTAVI

Query:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF
        PVYAAGSAQARHRQGRPHNAGN YENN  LLVA VLAAIAHL RV+
Subjt:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF

A0A5A7SUI0 Uncharacterized protein1.4e-5989.04Show/hide
Query:  MRRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHTGGGTAVI
        M RRGIRLIFLLFCSTLAISSAALQQQIF TATESNYQQK YT+K GK GVTNQI+RRYSASAITVSNVIRR  G AAAAGGGENGGGSRPHTGGGTAVI
Subjt:  MRRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHTGGGTAVI

Query:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF
        PVYAAGSAQARHRQGRPHNAGN YENN  LLVA VLAAIAHL RV+
Subjt:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF

A0A6J1GZ71 glycine-rich RNA-binding protein GRP1A-like1.2e-3767.81Show/hide
Query:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHT-GGGTAVI
        RRR + L+FLLFCST+   S+ALQQQI    TESNY QK   +KHGKDGVTN+I+  YSA AITVS    +G G  +AAGGGENGGG RP   GGG AVI
Subjt:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHT-GGGTAVI

Query:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF
        PVYAAGSAQA HRQGR  NAGN YENN+ LLVA+VLAAI HL+ VF
Subjt:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF

A0A6J1JB47 uncharacterized protein LOC1114851592.6e-3767.12Show/hide
Query:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHT-GGGTAVI
        RRR + L+FLLFCST+   S+A QQQI    TE NY QK   +KHG+DGVTN+I+  YSA AITVS    +G G  +AAGGGENGGG RP   GGG AVI
Subjt:  RRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHT-GGGTAVI

Query:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF
        PVYAAGSAQA HRQGRP NAGN YENN+ LLVA+VLAAIAHL+ VF
Subjt:  PVYAAGSAQARHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAAGAGGGATAAGATTGATTTTCTTACTGTTTTGTTCTACCTTGGCCATTTCATCTGCTGCTCTCCAACAACAAATCTTCGCAACAGCAACAGAGTCTAATTA
CCAACAGAAAATTTACACAAAAAAACATGGCAAAGATGGGGTTACTAACCAGATTAACAGAAGATACAGTGCAAGTGCAATAACCGTTTCTAATGTGATTCGTCGTGGAA
CTGGAAGTGCAGCCGCTGCCGGCGGTGGGGAAAATGGTGGTGGCAGTAGACCTCATACAGGAGGAGGTACAGCCGTGATCCCTGTTTATGCAGCTGGTTCAGCACAAGCA
CGTCACCGCCAAGGTCGACCGCATAATGCAGGAAATCGCTATGAGAACAATATATGGCTTCTGGTAGCTACAGTTTTGGCCGCCATTGCTCATCTCTATAGAGTTTTCTG
A
mRNA sequenceShow/hide mRNA sequence
CTTTACTGGATTGGAAGAAGAAAAAACCTAAGAACTTCCACTTCCCCACGGTTTTATATAAATAAATCAAAGTATAAGACCGTTTTCCCATTACCTAATAGAGAGAAGAT
AGCTATTTCTATTACAACAATGAGAAGAAGAGGGATAAGATTGATTTTCTTACTGTTTTGTTCTACCTTGGCCATTTCATCTGCTGCTCTCCAACAACAAATCTTCGCAA
CAGCAACAGAGTCTAATTACCAACAGAAAATTTACACAAAAAAACATGGCAAAGATGGGGTTACTAACCAGATTAACAGAAGATACAGTGCAAGTGCAATAACCGTTTCT
AATGTGATTCGTCGTGGAACTGGAAGTGCAGCCGCTGCCGGCGGTGGGGAAAATGGTGGTGGCAGTAGACCTCATACAGGAGGAGGTACAGCCGTGATCCCTGTTTATGC
AGCTGGTTCAGCACAAGCACGTCACCGCCAAGGTCGACCGCATAATGCAGGAAATCGCTATGAGAACAATATATGGCTTCTGGTAGCTACAGTTTTGGCCGCCATTGCTC
ATCTCTATAGAGTTTTCTGATGTCGAGGCTGTCTCCATTGGGACACAATAACATTGTTACATAGTTGGGCCTTCGTTTCCTGTTAAGAGCAAGAAAAAAGCAAAATATTT
GGCTTGCAAATGATTGTATGTGCAGAGAGAGAACCTCCTAAAGTCTTTTTTTTTCTTGTTTTGGGTGACCGTTGTATTGTACATAGACAGAAGTATTTTAATTGCCTCAA
TTAGATAATCTTCTGACAGGCATTACAATCACATAACTGAAATTATTGAATGTAAGAAACTAGTGAGAGAATCACCTCGGTTAGAATATTCCAGTTCTACAACCATGATG
GTAAGACCAATTGCAGGGTTGTGAACATTTTGGTTTATCCTATTTCAATTGATTGATAAAGACAAAAGTTCAGACTTCAAAAGCAAAGGAGAGATAGTTTTCATGAGATG
CATCATGTTAGTATATTAATTCGTGGACTTCATAAAGAAGATGGAGAAAACCTATAGTGCTTCAAGGCTCAAGCCATATTCACCCTTTGATCTACATAAATTGACCATAA
CAGAGAGACTTGGGGGTAGTAATATCTGTCCTGGCGGC
Protein sequenceShow/hide protein sequence
MRRRGIRLIFLLFCSTLAISSAALQQQIFATATESNYQQKIYTKKHGKDGVTNQINRRYSASAITVSNVIRRGTGSAAAAGGGENGGGSRPHTGGGTAVIPVYAAGSAQA
RHRQGRPHNAGNRYENNIWLLVATVLAAIAHLYRVF