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PI0019478 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019478
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA polymerase II C-terminal domain phosphatase-like 1
Genome locationchr06:16121310..16121813
RNA-Seq ExpressionPI0019478
SyntenyPI0019478
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065569.1 RNA polymerase II C-terminal domain phosphatase-like 1 [Cucumis melo var. makuwa]6.9e-0460.71Show/hide
Query:  MASERGIDETLEDQTPVGKPTEDTTV-ISAVVAAAVDARIGSAMDELFRRLQITPA
        M SE  I+ETL++QT  G  T+ T V ISA+VA AVDA+I +AMDE FRRLQ  PA
Subjt:  MASERGIDETLEDQTPVGKPTEDTTV-ISAVVAAAVDARIGSAMDELFRRLQITPA

TYK07134.1 RNA polymerase II C-terminal domain phosphatase-like 1 [Cucumis melo var. makuwa]6.9e-0460.71Show/hide
Query:  MASERGIDETLEDQTPVGKPTEDTTV-ISAVVAAAVDARIGSAMDELFRRLQITPA
        M SE  I+ETL++QT  G  T+ T V ISA+VA AVDA+I +AMDE FRRLQ  PA
Subjt:  MASERGIDETLEDQTPVGKPTEDTTV-ISAVVAAAVDARIGSAMDELFRRLQITPA

TrEMBL top hitse value%identityAlignment
A0A5A7VJD4 RNA polymerase II C-terminal domain phosphatase-like 13.3e-0460.71Show/hide
Query:  MASERGIDETLEDQTPVGKPTEDTTV-ISAVVAAAVDARIGSAMDELFRRLQITPA
        M SE  I+ETL++QT  G  T+ T V ISA+VA AVDA+I +AMDE FRRLQ  PA
Subjt:  MASERGIDETLEDQTPVGKPTEDTTV-ISAVVAAAVDARIGSAMDELFRRLQITPA

A0A5D3BES5 Kirola-like7.4e-0433.61Show/hide
Query:  MASERGIDETLEDQTPVGKPTEDTTVISAVVAAAVDARIGSAMDELFRRLQITPAFQNPTVFSKMHLHTSPTRLPFLVRSRRPILPCHPYVHPQPLVTPT
        M  E+G++ETLE QT VG  TE+T+ I+ V+A  +DA IG+AMDE                    HLH     LP       P+LP + Y  P     P 
Subjt:  MASERGIDETLEDQTPVGKPTEDTTVISAVVAAAVDARIGSAMDELFRRLQITPAFQNPTVFSKMHLHTSPTRLPFLVRSRRPILPCHPYVHPQPLVTPT

Query:  RRFMFCPLRSSSHRHFSHP
                  S+H    HP
Subjt:  RRFMFCPLRSSSHRHFSHP

A0A5D3C7A8 RNA polymerase II C-terminal domain phosphatase-like 13.3e-0460.71Show/hide
Query:  MASERGIDETLEDQTPVGKPTEDTTV-ISAVVAAAVDARIGSAMDELFRRLQITPA
        M SE  I+ETL++QT  G  T+ T V ISA+VA AVDA+I +AMDE FRRLQ  PA
Subjt:  MASERGIDETLEDQTPVGKPTEDTTV-ISAVVAAAVDARIGSAMDELFRRLQITPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAGAGCGAGGTATCGATGAAACCTTAGAAGATCAAACACCGGTTGGAAAGCCAACGGAGGACACAACTGTAATTAGTGCCGTCGTCGCTGCCGCTGTCGATGC
TCGGATTGGATCTGCCATGGACGAATTGTTCCGCCGTCTTCAGATTACACCAGCCTTCCAAAATCCGACAGTTTTTAGCAAAATGCACCTTCACACGTCGCCCACGCGCC
TGCCCTTTCTGGTCAGAAGCCGCCGGCCGATCCTTCCCTGCCACCCTTATGTTCATCCGCAGCCGCTAGTGACTCCCACACGCCGTTTTATGTTCTGCCCTCTTCGTTCG
TCCAGCCACCGTCATTTCAGCCATCCAATCTGTATGCCCTTCCCTCCACTACCCCTATTCCAAACCCTAACAAACATCCAGGGGTTGAGCATCCTCAAATCCACTCAACA
TTTGAAGTCGGAGAGTCTTCGGCATATTCCAACCCTACCATACCGACCTCTTCTTCGAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAGAGCGAGGTATCGATGAAACCTTAGAAGATCAAACACCGGTTGGAAAGCCAACGGAGGACACAACTGTAATTAGTGCCGTCGTCGCTGCCGCTGTCGATGC
TCGGATTGGATCTGCCATGGACGAATTGTTCCGCCGTCTTCAGATTACACCAGCCTTCCAAAATCCGACAGTTTTTAGCAAAATGCACCTTCACACGTCGCCCACGCGCC
TGCCCTTTCTGGTCAGAAGCCGCCGGCCGATCCTTCCCTGCCACCCTTATGTTCATCCGCAGCCGCTAGTGACTCCCACACGCCGTTTTATGTTCTGCCCTCTTCGTTCG
TCCAGCCACCGTCATTTCAGCCATCCAATCTGTATGCCCTTCCCTCCACTACCCCTATTCCAAACCCTAACAAACATCCAGGGGTTGAGCATCCTCAAATCCACTCAACA
TTTGAAGTCGGAGAGTCTTCGGCATATTCCAACCCTACCATACCGACCTCTTCTTCGAGAATAG
Protein sequenceShow/hide protein sequence
MASERGIDETLEDQTPVGKPTEDTTVISAVVAAAVDARIGSAMDELFRRLQITPAFQNPTVFSKMHLHTSPTRLPFLVRSRRPILPCHPYVHPQPLVTPTRRFMFCPLRS
SSHRHFSHPICMPFPPLPLFQTLTNIQGLSILKSTQHLKSESLRHIPTLPYRPLLRE