CuGenDBv2

Gene ID	PI0019492
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Fiber protein Fb15
Genome location	chr02:21858141..21861594
RNA-Seq Expression	PI0019492
Synteny	PI0019492
Gene Ontology terms	GO:0009299 - mRNA transcription (biological process) GO:0009416 - response to light stimulus (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KGN65836.2 hypothetical protein Csa_019715 [Cucumis sativus]

3.8e-41

95.56

Show/hide

Query:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEI+GLKVKELPAYVKPMLSIDAAKKAV+RSLDNYNAKYIQT SIDPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_004146334.1 uncharacterized protein LOC101202935 [Cucumis sativus]

3.8e-41

95.56

Show/hide

Query:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEI+GLKVKELPAYVKPMLSIDAAKKAV+RSLDNYNAKYIQT SIDPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_008453564.1 PREDICTED: uncharacterized protein LOC103494239 [Cucumis melo]

6.5e-41

94.44

Show/hide

Query:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEI+GLKVKELPAYVKPMLSIDAAKK VQRSLDNY+AKYIQT SIDPL+HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_022974229.1 uncharacterized protein LOC111472849 [Cucurbita maxima]

1.6e-39

92.22

Show/hide

Query:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAM+QFFSEIRGLKVKELP YVKPMLSID AKKAVQR LDNYNAKYIQTGSIDPL HVC+GGMI SYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_038879762.1 uncharacterized protein LOC120071511 [Benincasa hispida]

1.2e-42

97.78

Show/hide

Query:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIRGLKVKELPAYVKPMLSID+AKKAVQR LDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXD4 Uncharacterized protein

1.8e-41

95.56

Show/hide

Query:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEI+GLKVKELPAYVKPMLSIDAAKKAV+RSLDNYNAKYIQT SIDPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A1S3BWJ6 uncharacterized protein LOC103494239

3.1e-41

94.44

Show/hide

Query:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEI+GLKVKELPAYVKPMLSIDAAKK VQRSLDNY+AKYIQT SIDPL+HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A5D3DYB3 Uncharacterized protein

3.1e-41

94.44

Show/hide

Query:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEI+GLKVKELPAYVKPMLSIDAAKK VQRSLDNY+AKYIQT SIDPL+HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A6J1C4T8 uncharacterized protein LOC111007393

1.5e-38

88.89

Show/hide

Query:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEI+GLKVKELP +VKPMLSID  KKAV+R LDNYNAKYIQTGSIDPL HVCFGGM+FSYLVALPEERRHL HQQHAKEHGGH
Subjt:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A6J1IH01 uncharacterized protein LOC111472849

7.7e-40

92.22

Show/hide

Query:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAM+QFFSEIRGLKVKELP YVKPMLSID AKKAVQR LDNYNAKYIQTGSIDPL HVC+GGMI SYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G30010.1 unknown protein

1.5e-32

67.78

Show/hide

Query:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MA+++ +SEIRG KV ELP Y+K   S++  K +V+R LDNYN KYIQT S+DP+ H+CF GM FSYLVALP ERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAATGAAGCAATTCTTCTCCGAAATCAGGGGCTTGAAGGTTAAGGAGCTGCCTGCCTATGTGAAACCGATGCTCTCCATTGATGCTGCCAAGAAGGCTGTGCAGAG
AAGTCTCGACAATTACAATGCCAAGTACATTCAAACTGGTTCAATTGACCCTCTCTATCATGTCTGCTTTGGTGGTATGATCTTTTCGTACCTCGTTGCGCTTCCTGAGG
AACGACGCCACCTTGAACATCAGCAACACGCCAAAGAACATGGTGGCCATTGA

mRNA sequence

Show/hide mRNA sequence

TGAAAATCCAAAGCGTCCAATAAGCAAAATGGGGCCAAAGTAACGAACGGTCACGATTAGACTGCCATCTCTCCCCTGCAAAAACTTCTTTTTCGATCTCGATCTTGTAT
TTCAGGGCTAGGGTTTGAGTTTTGGGCAAATTATTCAGAAATGGCAATGAAGCAATTCTTCTCCGAAATCAGGGGCTTGAAGGTTAAGGAGCTGCCTGCCTATGTGAAAC
CGATGCTCTCCATTGATGCTGCCAAGAAGGCTGTGCAGAGAAGTCTCGACAATTACAATGCCAAGTACATTCAAACTGGTTCAATTGACCCTCTCTATCATGTCTGCTTT
GGTGGTATGATCTTTTCGTACCTCGTTGCGCTTCCTGAGGAACGACGCCACCTTGAACATCAGCAACACGCCAAAGAACATGGTGGCCATTGATTGAGTTCTTTATATTT
TGAGGGTGAAGGTGCCTGCCTCAAAGGTGTTTCTGGTCAATAATTTGTTTCCCGAATGTTTTTGTATCTTAGTCTTACTGGCTGAAACTTGCAATTCTTTTCTTTCTATA
CATGGTGCCAGAAGAAATAAACATACTTTTATGTGATTTTTAATCATATATGGCAACCATCCTTGAGTCGCAGCACAAGTTCATGGCTGGTTTCTTTACTTGATTGCACA
TTATCCTTCCCCCATACTTGTTTCTCTAGTTAGTTCTTTGCCAATGGCCTATAATACTTTTGCTGTAGACTTCAGATGCAAATTGATTCTCTCATTTCCTCAAGTTGTTA
GTAGTAATCTCAAAGATTACAGTGATGAATTCCCTTCCTGATTCAATCCAAGTAGGATCAATTTGAATACTCACTAGTTTTTTTTTGTGATAAAAAATATGTTGGAGTGA
TTCTAAATATGACAAAAGTGATTTTTACCGCTTCAAAATAATTTTCAAAGATGTACTAAATCAATCTTGTTGGTTGCATCTATTCTTGTAAATTAATAATGGCCTAGAAT
TTTTTTCAGACTGAACTCTAAA

Protein sequence

Show/hide protein sequence

MAMKQFFSEIRGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

PI0019492 (gene) of Melon (PI 482460) v1 genome