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PI0019493 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019493
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBHLH transcription factor
Genome locationchr02:23777619..23778018
RNA-Seq ExpressionPI0019493
SyntenyPI0019493
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0040008 - regulation of growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044293 - Transcription factor PRE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138158.1 transcription factor PRE3-like [Cucumis sativus]1.2e-3798.91Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSA+KVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

XP_008453188.1 PREDICTED: transcription factor PRE3-like [Cucumis melo]5.2e-38100Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

XP_022135424.1 transcription factor ILI6-like [Momordica charantia]4.1e-3596.74Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRHRQSDKVSAA VLQETCNYIR+LHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

XP_022987208.1 transcription factor PRE3-like [Cucurbita maxima]2.7e-3493.48Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRH QSDKVSAAK+LQETCNYI+NLHREVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

XP_038880650.1 transcription factor PRE3-like [Benincasa hispida]1.4e-3597.83Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRH QSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

TrEMBL top hitse value%identityAlignment
A0A1S3BWE2 transcription factor PRE3-like2.5e-38100Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

A0A1S3TPF8 transcription factor ILI63.8e-3490.22Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSRRSRSRQ+G+SR+ITDDQINDLVSKLQQLLPEIR R SDKVSA+KVLQETCNYIR+LHREVDDLSERLSELLAT+DTAQAAIIR+LLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

A0A6J1C1E4 transcription factor ILI6-like2.0e-3596.74Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRHRQSDKVSAA VLQETCNYIR+LHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

A0A6J1IDH8 transcription factor ILI6-like2.9e-3494.57Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRHRQSDK SAA VLQETCNYIR+LHREVDDLSERL+ELLATSDTAQAAIIRSLLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

A0A6J1JIT1 transcription factor PRE3-like1.3e-3493.48Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRH QSDKVSAAK+LQETCNYI+NLHREVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

SwissProt top hitse value%identityAlignment
B8APB5 Transcription factor ILI63.5e-2980.65Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSD--TAQAAIIRSLLM
        MSSRRSRSRQSGSSR ITD+QI+DLVSKLQ LLPE R R +D+V +++VLQETCNYIR+LH+EVDDLSERLSELLATSD  +AQAAIIRSLLM
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSD--TAQAAIIRSLLM

F4JCN9 Transcription factor PRE42.4e-2570.97Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSR+SRSRQ+G+S  ITD+QINDLV +L +LLPE+  +R+S KVSA++VLQETC+YIRNL +EVDDLSERLS+LL ++D+AQAA+IRSLLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

Q0DUR2 Transcription factor ILI63.5e-2980.65Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSD--TAQAAIIRSLLM
        MSSRRSRSRQSGSSR ITD+QI+DLVSKLQ LLPE R R +D+V +++VLQETCNYIR+LH+EVDDLSERLSELLATSD  +AQAAIIRSLLM
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSD--TAQAAIIRSLLM

Q8GW32 Transcription factor PRE62.7e-2981.72Show/hide
Query:  MSSRR-SRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSD--TAQAAIIRSLL
        MSSRR SRSRQSGSSR I+DDQI+DLVSKLQ L+PE+R R+SDKVSA+KVLQETCNYIRNLHREVDDLS+RLSELLA++D  +A+AAIIRSLL
Subjt:  MSSRR-SRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSD--TAQAAIIRSLL

Q9CA64 Transcription factor PRE31.4e-3079.57Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIR-HRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MS RRSRSRQS  +  I++DQINDL+ KLQQLLPE+R  R+SDKVSAA+VLQ+TCNYIRNLHREVDDLSERLSELLA SDTAQAA+IRSLL Q
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIR-HRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

Arabidopsis top hitse value%identityAlignment
AT1G26945.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.9e-3081.72Show/hide
Query:  MSSRR-SRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSD--TAQAAIIRSLL
        MSSRR SRSRQSGSSR I+DDQI+DLVSKLQ L+PE+R R+SDKVSA+KVLQETCNYIRNLHREVDDLS+RLSELLA++D  +A+AAIIRSLL
Subjt:  MSSRR-SRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSD--TAQAAIIRSLL

AT1G74500.1 activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 11.0e-3179.57Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIR-HRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MS RRSRSRQS  +  I++DQINDL+ KLQQLLPE+R  R+SDKVSAA+VLQ+TCNYIRNLHREVDDLSERLSELLA SDTAQAA+IRSLL Q
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIR-HRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein1.1e-2265.96Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELL--ATSDTAQAAIIRSLLM
        MS+R  RSRQ+ ++  I+DDQ+ DLVSKL+Q LPEI   R+SDKVSA+KVLQETCNYIR LHREVD+LS+RLS+LL     D+ +AA+IRSLLM
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELL--ATSDTAQAAIIRSLLM

AT3G47710.1 BANQUO 31.7e-2670.97Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ
        MSSR+SRSRQ+G+S  ITD+QINDLV +L +LLPE+  +R+S KVSA++VLQETC+YIRNL +EVDDLSERLS+LL ++D+AQAA+IRSLLMQ
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

AT5G39860.1 basic helix-loop-helix (bHLH) DNA-binding family protein6.6e-2367.02Show/hide
Query:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLAT--SDTAQAAIIRSLLM
        MS+R  RSRQS S+  I+D+Q+ DLVSKL+Q+LPEI + R+SDK SA+KVLQETCNYIRNL+REVD+LSERLS+LL +   D+ +AA+IRSLLM
Subjt:  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLAT--SDTAQAAIIRSLLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGCAGAAGATCTAGATCTAGACAATCAGGTAGTTCAAGATCAATCACTGATGACCAAATTAATGATCTTGTTTCTAAGTTGCAACAACTTCTTCCCGAGATTCG
CCACAGGCAATCCGATAAGGTTTCGGCAGCAAAAGTGTTGCAGGAGACGTGTAACTACATACGAAACCTACATAGAGAAGTGGATGATTTGAGTGAGAGACTTTCAGAGT
TGTTGGCAACATCTGATACTGCTCAAGCTGCCATTATTAGGAGTTTACTTATGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGCAGAAGATCTAGATCTAGACAATCAGGTAGTTCAAGATCAATCACTGATGACCAAATTAATGATCTTGTTTCTAAGTTGCAACAACTTCTTCCCGAGATTCG
CCACAGGCAATCCGATAAGGTTTCGGCAGCAAAAGTGTTGCAGGAGACGTGTAACTACATACGAAACCTACATAGAGAAGTGGATGATTTGAGTGAGAGACTTTCAGAGT
TGTTGGCAACATCTGATACTGCTCAAGCTGCCATTATTAGGAGTTTACTTATGCAATAG
Protein sequenceShow/hide protein sequence
MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ