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PI0019559 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019559
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr05:11995133..12000863
RNA-Seq ExpressionPI0019559
SyntenyPI0019559
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025369.1 uncharacterized protein E6C27_scaffold1204G00530 [Cucumis melo var. makuwa]2.0e-1971.79Show/hide
Query:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
        MKQQIT LTT ISK+EGKGKLLAQ DHANVS I LRSGK L TP+++EKKVTS P+ L + +E+KEEK+ETN  PSNS
Subjt:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
KAA0062400.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.5e-1969.23Show/hide
Query:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
        MKQQ+T LTT ISK++GKGKL AQPDHANVS I LRSGK L+TP+++EKKVTS P+ L + +E+KEEK+ETN  PSNS
Subjt:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
KAA0066512.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.0e-1969.23Show/hide
Query:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
        MKQQ+T LTT ISK++GKGKL  QPDHANVS I LRSGK L+TP+++EKKVTS P+ L + +E+KEEK+ETN LPSNS
Subjt:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
TYK26581.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.5e-1969.23Show/hide
Query:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
        MKQQ+T LTT ISK++GKGKL AQPDHANVS I LRSGK L+TP+++EKKVTS P+ L + +E+KEEK+ETN  PSNS
Subjt:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]1.0e-1870.51Show/hide
Query:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
        MKQQ+T LTTVISK++GKGKLLAQPDHANVS I LRS K L+TP+++EKKVTS P+ L + +E+KEEK ETN  PSNS
Subjt:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
TrEMBL top hitse value%identityAlignment
A0A5A7V594 Retrotransposon gag protein2.2e-1969.23Show/hide
Query:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
        MKQQ+T LTT ISK++GKGKL AQPDHANVS I LRSGK L+TP+++EKKVTS P+ L + +E+KEEK+ETN  PSNS
Subjt:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
A0A5D3C4I5 Retrotransposon gag protein9.8e-2069.23Show/hide
Query:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
        MKQQ+T LTT ISK++GKGKL  QPDHANVS I LRSGK L+TP+++EKKVTS P+ L + +E+KEEK+ETN LPSNS
Subjt:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
A0A5D3DCG3 Retrotransposon gag protein4.9e-1970.51Show/hide
Query:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
        MKQQ+T LTTVISK++GKGKLLAQPDHANVS I LRS K L+TP+++EKKVTS P+ L + +E+KEEK ETN  PSNS
Subjt:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
A0A5D3DIP6 Retrotrans_gag domain-containing protein9.8e-2071.79Show/hide
Query:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
        MKQQIT LTT ISK+EGKGKLLAQ DHANVS I LRSGK L TP+++EKKVTS P+ L + +E+KEEK+ETN  PSNS
Subjt:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
A0A5D3DS57 Retrotransposon gag protein2.2e-1969.23Show/hide
Query:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
        MKQQ+T LTT ISK++GKGKL AQPDHANVS I LRSGK L+TP+++EKKVTS P+ L + +E+KEEK+ETN  PSNS
Subjt:  MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAACAAATTACTCATCTCACAACCGTTATTAGTAAGTTGGAAGGAAAAGGTAAACTTCTGGCCCAACCGGATCATGCAAATGTAAGTACCATCCCACTTAGAAG
TGGTAAGACTCTTGAAACCCCTTCAAGTGAAGAAAAAAAGGTAACTTCCAACCCTATCCTTCTTGAAAATAATAGTGAGACTAAGGAAGAAAAAATTGAAACAAATGCTT
TACCATCTAATTCTAATAAAGGGTGGGTTCGAAGTAGATCCCAGATCGAAGAAGAGCATCCTACAGAATGCGAGTGTTTGCTACCGCCAATTCAAGTCATCAAAATCGAG
TACATCCAGTGGTCTAAGATTGATCGTGCTTTAGTATGGAAGAAAGCACGAACAAACAAAGACGAGGACATTCCTGACAAGGACATGAAAGAGGTGGTCGGTCGTATTGA
GGGGATGATCCATTGGGAAGGATTCGAGGGGTTGGTAAATGTCACACACGAAAAATACTTTCACACTGTTAGGGAGAAAAGAAAGAAAAAGGCAACCAAAGAAGAAGATT
ACGCCGAAGAACGAGCTAGAATGTCAACTCGAACATTGGAATTTGAAGCAGAATTAATGAACCATAGGAGGGTTCAAGAAATGCTAACGATTGGAGACGTTGTTTTAAGA
GCAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAACAAATTACTCATCTCACAACCGTTATTAGTAAGTTGGAAGGAAAAGGTAAACTTCTGGCCCAACCGGATCATGCAAATGTAAGTACCATCCCACTTAGAAG
TGGTAAGACTCTTGAAACCCCTTCAAGTGAAGAAAAAAAGGTAACTTCCAACCCTATCCTTCTTGAAAATAATAGTGAGACTAAGGAAGAAAAAATTGAAACAAATGCTT
TACCATCTAATTCTAATAAAGGGTGGGTTCGAAGTAGATCCCAGATCGAAGAAGAGCATCCTACAGAATGCGAGTGTTTGCTACCGCCAATTCAAGTCATCAAAATCGAG
TACATCCAGTGGTCTAAGATTGATCGTGCTTTAGTATGGAAGAAAGCACGAACAAACAAAGACGAGGACATTCCTGACAAGGACATGAAAGAGGTGGTCGGTCGTATTGA
GGGGATGATCCATTGGGAAGGATTCGAGGGGTTGGTAAATGTCACACACGAAAAATACTTTCACACTGTTAGGGAGAAAAGAAAGAAAAAGGCAACCAAAGAAGAAGATT
ACGCCGAAGAACGAGCTAGAATGTCAACTCGAACATTGGAATTTGAAGCAGAATTAATGAACCATAGGAGGGTTCAAGAAATGCTAACGATTGGAGACGTTGTTTTAAGA
GCAAGGTAA
Protein sequenceShow/hide protein sequence
MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNSNKGWVRSRSQIEEEHPTECECLLPPIQVIKIE
YIQWSKIDRALVWKKARTNKDEDIPDKDMKEVVGRIEGMIHWEGFEGLVNVTHEKYFHTVREKRKKKATKEEDYAEERARMSTRTLEFEAELMNHRRVQEMLTIGDVVLR
AR