; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019580 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019580
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr07:13264756..13266832
RNA-Seq ExpressionPI0019580
SyntenyPI0019580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]4.0e-8682.18Show/hide
Query:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN
        M ENSQ+FGNRALELDN LTKEVSELKSQMLNMTTLLTSFVQG PLKV KCGVC LVGHPNDKCP++IEDVN++RKYDP+GNTYN GWRDN NLRWGNDN
Subjt:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE
        QK TQA  +SSNQG NLEDI+KALATNTLSFQQEMKQQMTQLTTAISK++GKGKLPAQPD+ANVSAISLRSGKIL+TP+++EKKVT  L+PL  +NE +E
Subjt:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE

Query:  HR
         +
Subjt:  HR
KAA0032798.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.6e-8583.08Show/hide
Query:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN
        MAENSQ+FGNRA ELDNSLTKEVSELKSQMLNMTTLLTSFVQG PLKV KCGVCGLVG+PNDKCP +IEDVN++R+YDPHGNTYNLGWRDN NLRWGNDN
Subjt:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPLENE
        QK TQA  +SSNQG NLEDI+ ALATNTLSFQQEMKQQMTQLTT +SK++GKGKLPAQPDH NVSAISLRSGKIL+TP+++EKKVT  L+PL ++
Subjt:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPLENE
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-8481.19Show/hide
Query:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN
        MAENSQSF NRA ELDNSLTKEVSELKSQMLNMTTLLTSFVQG PLKV KCGVCGLVGHPNDKCP++IEDVN++RKYDPHGNTYN GWRDN NLRWGNDN
Subjt:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE
        QK TQA S+SSNQG NLEDI+KALATNTLSFQQEMKQQMTQLTTAISK++GKGKL AQ ++ANVSA+SLRSGKIL+TP+++EKK T   +PL  +NE +E
Subjt:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE

Query:  HR
         +
Subjt:  HR
KAA0065554.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-8482.74Show/hide
Query:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN
        MAENSQSF NRA ELDNSLTKEVSELKSQMLNMTTLLTSFVQG PLKV KCGVCGLVGHPNDK P++IEDVN++R+YDPHGNTYN GWRDN  LRWGNDN
Subjt:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPLENEIE
        QK  QA S+SSNQG NLEDI+KALA NTLSFQQEMKQQMTQLTTAISK++GKGKLPAQP+HANVSAISLRSGKIL+TP+++EKKVT  L+PL ++ E
Subjt:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPLENEIE
TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.0e-8581.68Show/hide
Query:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN
        MAENS+SFGNRA ELDNSLTKEVSELKSQMLNMTTLLTSFVQG P KV KCGVCGLVGHPNDKCP +IEDVN++R+YDPH NTYN GWRDN NLRWGNDN
Subjt:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE
        QK TQA S+SSNQG NLEDI+KALATNTLSFQQ+MKQQMTQLTTAISK++GKGKLPAQPDHANVSAISLRSGKIL+TP+++EKK+T   +PL  +NE +E
Subjt:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE

Query:  HR
         +
Subjt:  HR
TrEMBL top hitse value%identityAlignment
A0A5A7SQH8 Retrotransposon gag protein3.7e-8583.08Show/hide
Query:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN
        MAENSQ+FGNRA ELDNSLTKEVSELKSQMLNMTTLLTSFVQG PLKV KCGVCGLVG+PNDKCP +IEDVN++R+YDPHGNTYNLGWRDN NLRWGNDN
Subjt:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPLENE
        QK TQA  +SSNQG NLEDI+ ALATNTLSFQQEMKQQMTQLTT +SK++GKGKLPAQPDH NVSAISLRSGKIL+TP+++EKKVT  L+PL ++
Subjt:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPLENE
A0A5A7VE49 Retrotransposon gag protein8.2e-8582.74Show/hide
Query:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN
        MAENSQSF NRA ELDNSLTKEVSELKSQMLNMTTLLTSFVQG PLKV KCGVCGLVGHPNDK P++IEDVN++R+YDPHGNTYN GWRDN  LRWGNDN
Subjt:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPLENEIE
        QK  QA S+SSNQG NLEDI+KALA NTLSFQQEMKQQMTQLTTAISK++GKGKLPAQP+HANVSAISLRSGKIL+TP+++EKKVT  L+PL ++ E
Subjt:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPLENEIE
A0A5D3CB46 Retrotransposon gag protein9.7e-8681.68Show/hide
Query:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN
        MAENS+SFGNRA ELDNSLTKEVSELKSQMLNMTTLLTSFVQG P KV KCGVCGLVGHPNDKCP +IEDVN++R+YDPH NTYN GWRDN NLRWGNDN
Subjt:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE
        QK TQA S+SSNQG NLEDI+KALATNTLSFQQ+MKQQMTQLTTAISK++GKGKLPAQPDHANVSAISLRSGKIL+TP+++EKK+T   +PL  +NE +E
Subjt:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE

Query:  HR
         +
Subjt:  HR
A0A5D3CRR8 Retrotransposon gag protein8.2e-8581.19Show/hide
Query:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN
        MAENSQSF NRA ELDNSLTKEVSELKSQMLNMTTLLTSFVQG PLKV KCGVCGLVGHPNDKCP++IEDVN++RKYDPHGNTYN GWRDN NLRWGNDN
Subjt:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE
        QK TQA S+SSNQG NLEDI+KALATNTLSFQQEMKQQMTQLTTAISK++GKGKL AQ ++ANVSA+SLRSGKIL+TP+++EKK T   +PL  +NE +E
Subjt:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE

Query:  HR
         +
Subjt:  HR
E5GBZ4 Retrotransposon gag protein2.0e-8682.18Show/hide
Query:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN
        M ENSQ+FGNRALELDN LTKEVSELKSQMLNMTTLLTSFVQG PLKV KCGVC LVGHPNDKCP++IEDVN++RKYDP+GNTYN GWRDN NLRWGNDN
Subjt:  MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE
        QK TQA  +SSNQG NLEDI+KALATNTLSFQQEMKQQMTQLTTAISK++GKGKLPAQPD+ANVSAISLRSGKIL+TP+++EKKVT  L+PL  +NE +E
Subjt:  QKPTQATSSSSNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPL--ENEIEE

Query:  HR
         +
Subjt:  HR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGAACTCTCAAAGTTTTGGGAATAGAGCATTGGAACTTGACAACTCTCTAACAAAAGAGGTAAGTGAATTAAAATCTCAAATGTTAAATATGACTACTCTTCT
GACTTCTTTTGTGCAAGGTGGCCCTCTCAAAGTAGCCAAGTGTGGAGTTTGTGGCTTAGTTGGTCATCCAAATGACAAGTGCCCCGACTTGATTGAGGATGTTAATGTCA
TTCGTAAGTATGATCCCCACGGTAATACATACAATTTGGGATGGAGAGACAATTCAAATTTGAGATGGGGGAATGACAACCAAAAACCCACCCAAGCAACATCCTCCTCT
TCAAACCAAGGTATGAATCTTGAAGACATAGTCAAAGCTTTAGCTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACAAATGACTCAACTCACTACCGCCATAAG
CAAGTTGGAAGGAAAAGGTAAGCTTCCGGCCCAACCGGATCATGCAAATGTGAGTGCCATCTCACTAAGAAGTGGTAAGATTCTTGAAACCCCTTCTAGTGAAGAAAAAA
AGGTAACTCCCAATCTTATCCCTCTTGAAAATGAAATAGAGGAGCATCGCTTTGTCCAATGCGATAGTGCTGTCGTGGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGAACTCTCAAAGTTTTGGGAATAGAGCATTGGAACTTGACAACTCTCTAACAAAAGAGGTAAGTGAATTAAAATCTCAAATGTTAAATATGACTACTCTTCT
GACTTCTTTTGTGCAAGGTGGCCCTCTCAAAGTAGCCAAGTGTGGAGTTTGTGGCTTAGTTGGTCATCCAAATGACAAGTGCCCCGACTTGATTGAGGATGTTAATGTCA
TTCGTAAGTATGATCCCCACGGTAATACATACAATTTGGGATGGAGAGACAATTCAAATTTGAGATGGGGGAATGACAACCAAAAACCCACCCAAGCAACATCCTCCTCT
TCAAACCAAGGTATGAATCTTGAAGACATAGTCAAAGCTTTAGCTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACAAATGACTCAACTCACTACCGCCATAAG
CAAGTTGGAAGGAAAAGGTAAGCTTCCGGCCCAACCGGATCATGCAAATGTGAGTGCCATCTCACTAAGAAGTGGTAAGATTCTTGAAACCCCTTCTAGTGAAGAAAAAA
AGGTAACTCCCAATCTTATCCCTCTTGAAAATGAAATAGAGGAGCATCGCTTTGTCCAATGCGATAGTGCTGTCGTGGCGTGA
Protein sequenceShow/hide protein sequence
MAENSQSFGNRALELDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNLGWRDNSNLRWGNDNQKPTQATSSS
SNQGMNLEDIVKALATNTLSFQQEMKQQMTQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKKVTPNLIPLENEIEEHRFVQCDSAVVA